data_4C62 # _model_server_result.job_id 5y7OVJ1EjpM2hI56iwKsDg _model_server_result.datetime_utc '2024-10-20 03:53:00' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4c62 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":2135}' # _entry.id 4C62 # _exptl.entry_id 4C62 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 400.413 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N2-[(1S)-1-(5-fluoropyrimidin-2-yl)ethyl]-n4-(1-methylimidazol-4-yl)-6-morpholino-1,3,5-triazine-2,4-diamine _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 97.53 _cell.angle_gamma 90 _cell.entry_id 4C62 _cell.length_a 44.507 _cell.length_b 126.889 _cell.length_c 135.875 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4C62 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,H 1 1 B,F,G,I 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 G N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C GLU 172 A GLU 1006 1_555 A N PTR 173 A PTR 1007 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale2 A C PTR 173 A PTR 1007 1_555 A N PTR 174 A PTR 1008 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale3 A C PTR 174 A PTR 1008 1_555 A N LYS 175 A LYS 1009 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale4 B C GLU 172 B GLU 1006 1_555 B N PTR 173 B PTR 1007 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale5 B C PTR 173 B PTR 1007 1_555 B N PTR 174 B PTR 1008 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale6 B C PTR 174 B PTR 1008 1_555 B N LYS 175 B LYS 1009 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? # _chem_comp.formula 'C17 H21 F N10 O' _chem_comp.formula_weight 400.413 _chem_comp.id XWW _chem_comp.mon_nstd_flag . _chem_comp.name N2-[(1S)-1-(5-fluoropyrimidin-2-yl)ethyl]-n4-(1-methylimidazol-4-yl)-6-morpholino-1,3,5-triazine-2,4-diamine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 XWW sing 411 n n C2 C3 XWW sing 412 n n C2 N3 XWW sing 413 n n C3 N1 XWW sing 414 n y C3 N2 XWW doub 415 n y N1 C4 XWW doub 416 n y C4 C5 XWW sing 417 n y C5 C6 XWW doub 418 n y C5 F1 XWW sing 419 n n C6 N2 XWW sing 420 n y N3 C7 XWW sing 421 n n C7 N4 XWW sing 422 n y C7 N6 XWW doub 423 n y N4 C8 XWW doub 424 n y C8 N5 XWW sing 425 n y C8 N8 XWW sing 426 n n N5 C9 XWW doub 427 n y C9 N6 XWW sing 428 n y C9 N7 XWW sing 429 n n N7 C10 XWW sing 430 n n N7 C13 XWW sing 431 n n C10 C11 XWW sing 432 n n C11 O1 XWW sing 433 n n O1 C12 XWW sing 434 n n C12 C13 XWW sing 435 n n N8 C14 XWW sing 436 n n C14 C15 XWW doub 437 n y C14 N10 XWW sing 438 n y C15 N9 XWW sing 439 n y N9 C16 XWW sing 440 n y N9 C17 XWW sing 441 n n C16 N10 XWW doub 442 n y C1 H11C XWW sing 443 n n C1 H12C XWW sing 444 n n C1 H13C XWW sing 445 n n C2 H2 XWW sing 446 n n N3 H3 XWW sing 447 n n C4 H4 XWW sing 448 n n C6 H6 XWW sing 449 n n N8 H8 XWW sing 450 n n C10 H101 XWW sing 451 n n C10 H102 XWW sing 452 n n C13 H131 XWW sing 453 n n C13 H132 XWW sing 454 n n C11 H111 XWW sing 455 n n C11 H112 XWW sing 456 n n C12 H121 XWW sing 457 n n C12 H122 XWW sing 458 n n C15 H15 XWW sing 459 n n C16 H16 XWW sing 460 n n C17 H171 XWW sing 461 n n C17 H172 XWW sing 462 n n C17 H173 XWW sing 463 n n # _atom_sites.entry_id 4C62 _atom_sites.fract_transf_matrix[1][1] 0.022468 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.00297 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007881 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007424 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 XWW A 1 2133 2133 XWW XWW . D 3 ACT A 1 2134 2134 ACT ACT . E 3 ACT A 1 2135 2135 ACT ACT . F 3 ACT B 1 2134 2134 ACT ACT . G 2 XWW B 1 2135 2135 XWW XWW . H 4 HOH A 1 2001 2001 HOH HOH . H 4 HOH A 2 2002 2002 HOH HOH . H 4 HOH A 3 2003 2003 HOH HOH . H 4 HOH A 4 2004 2004 HOH HOH . H 4 HOH A 5 2005 2005 HOH HOH . H 4 HOH A 6 2006 2006 HOH HOH . H 4 HOH A 7 2007 2007 HOH HOH . H 4 HOH A 8 2008 2008 HOH HOH . H 4 HOH A 9 2009 2009 HOH HOH . H 4 HOH A 10 2010 2010 HOH HOH . H 4 HOH A 11 2011 2011 HOH HOH . H 4 HOH A 12 2012 2012 HOH HOH . H 4 HOH A 13 2013 2013 HOH HOH . H 4 HOH A 14 2014 2014 HOH HOH . H 4 HOH A 15 2015 2015 HOH HOH . H 4 HOH A 16 2016 2016 HOH HOH . H 4 HOH A 17 2017 2017 HOH HOH . H 4 HOH A 18 2018 2018 HOH HOH . H 4 HOH A 19 2019 2019 HOH HOH . H 4 HOH A 20 2020 2020 HOH HOH . H 4 HOH A 21 2021 2021 HOH HOH . H 4 HOH A 22 2022 2022 HOH HOH . H 4 HOH A 23 2023 2023 HOH HOH . H 4 HOH A 24 2024 2024 HOH HOH . H 4 HOH A 25 2025 2025 HOH HOH . H 4 HOH A 26 2026 2026 HOH HOH . H 4 HOH A 27 2027 2027 HOH HOH . H 4 HOH A 28 2028 2028 HOH HOH . H 4 HOH A 29 2029 2029 HOH HOH . H 4 HOH A 30 2030 2030 HOH HOH . H 4 HOH A 31 2031 2031 HOH HOH . H 4 HOH A 32 2032 2032 HOH HOH . H 4 HOH A 33 2033 2033 HOH HOH . H 4 HOH A 34 2034 2034 HOH HOH . H 4 HOH A 35 2035 2035 HOH HOH . H 4 HOH A 36 2036 2036 HOH HOH . H 4 HOH A 37 2037 2037 HOH HOH . H 4 HOH A 38 2038 2038 HOH HOH . H 4 HOH A 39 2039 2039 HOH HOH . H 4 HOH A 40 2040 2040 HOH HOH . H 4 HOH A 41 2041 2041 HOH HOH . H 4 HOH A 42 2042 2042 HOH HOH . H 4 HOH A 43 2043 2043 HOH HOH . H 4 HOH A 44 2044 2044 HOH HOH . I 4 HOH B 1 2001 2001 HOH HOH . I 4 HOH B 2 2002 2002 HOH HOH . I 4 HOH B 3 2003 2003 HOH HOH . I 4 HOH B 4 2004 2004 HOH HOH . I 4 HOH B 5 2005 2005 HOH HOH . I 4 HOH B 6 2006 2006 HOH HOH . I 4 HOH B 7 2007 2007 HOH HOH . I 4 HOH B 8 2008 2008 HOH HOH . I 4 HOH B 9 2009 2009 HOH HOH . I 4 HOH B 10 2010 2010 HOH HOH . I 4 HOH B 11 2011 2011 HOH HOH . I 4 HOH B 12 2012 2012 HOH HOH . I 4 HOH B 13 2013 2013 HOH HOH . I 4 HOH B 14 2014 2014 HOH HOH . I 4 HOH B 15 2015 2015 HOH HOH . I 4 HOH B 16 2016 2016 HOH HOH . I 4 HOH B 17 2017 2017 HOH HOH . I 4 HOH B 18 2018 2018 HOH HOH . I 4 HOH B 19 2019 2019 HOH HOH . I 4 HOH B 20 2020 2020 HOH HOH . I 4 HOH B 21 2021 2021 HOH HOH . I 4 HOH B 22 2022 2022 HOH HOH . I 4 HOH B 23 2023 2023 HOH HOH . I 4 HOH B 24 2024 2024 HOH HOH . I 4 HOH B 25 2025 2025 HOH HOH . I 4 HOH B 26 2026 2026 HOH HOH . I 4 HOH B 27 2027 2027 HOH HOH . I 4 HOH B 28 2028 2028 HOH HOH . I 4 HOH B 29 2029 2029 HOH HOH . I 4 HOH B 30 2030 2030 HOH HOH . I 4 HOH B 31 2031 2031 HOH HOH . I 4 HOH B 32 2032 2032 HOH HOH . I 4 HOH B 33 2033 2033 HOH HOH . I 4 HOH B 34 2034 2034 HOH HOH . I 4 HOH B 35 2035 2035 HOH HOH . I 4 HOH B 36 2036 2036 HOH HOH . I 4 HOH B 37 2037 2037 HOH HOH . I 4 HOH B 38 2038 2038 HOH HOH . I 4 HOH B 39 2039 2039 HOH HOH . I 4 HOH B 40 2040 2040 HOH HOH . I 4 HOH B 41 2041 2041 HOH HOH . I 4 HOH B 42 2042 2042 HOH HOH . I 4 HOH B 43 2043 2043 HOH HOH . I 4 HOH B 44 2044 2044 HOH HOH . I 4 HOH B 45 2045 2045 HOH HOH . I 4 HOH B 46 2046 2046 HOH HOH . I 4 HOH B 47 2047 2047 HOH HOH . I 4 HOH B 48 2048 2048 HOH HOH . I 4 HOH B 49 2049 2049 HOH HOH . I 4 HOH B 50 2050 2050 HOH HOH . I 4 HOH B 51 2051 2051 HOH HOH . I 4 HOH B 52 2052 2052 HOH HOH . I 4 HOH B 53 2053 2053 HOH HOH . I 4 HOH B 54 2054 2054 HOH HOH . I 4 HOH B 55 2055 2055 HOH HOH . I 4 HOH B 56 2056 2056 HOH HOH . I 4 HOH B 57 2057 2057 HOH HOH . I 4 HOH B 58 2058 2058 HOH HOH . I 4 HOH B 59 2059 2059 HOH HOH . I 4 HOH B 60 2060 2060 HOH HOH . I 4 HOH B 61 2061 2061 HOH HOH . I 4 HOH B 62 2062 2062 HOH HOH . I 4 HOH B 63 2063 2063 HOH HOH . I 4 HOH B 64 2064 2064 HOH HOH . I 4 HOH B 65 2065 2065 HOH HOH . I 4 HOH B 66 2066 2066 HOH HOH . I 4 HOH B 67 2067 2067 HOH HOH . I 4 HOH B 68 2068 2068 HOH HOH . I 4 HOH B 69 2069 2069 HOH HOH . I 4 HOH B 70 2070 2070 HOH HOH . I 4 HOH B 71 2071 2071 HOH HOH . I 4 HOH B 72 2072 2072 HOH HOH . I 4 HOH B 73 2073 2073 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 XWW . . . G 2 -10.574 -25.483 21.308 1 42.86 ? C1 XWW 2135 B 1 HETATM 2 C C2 XWW . . . G 2 -9.93 -25.244 22.651 1 43.62 ? C2 XWW 2135 B 1 HETATM 3 C C3 XWW . . . G 2 -9.631 -23.805 22.662 1 44.45 ? C3 XWW 2135 B 1 HETATM 4 N N1 XWW . . . G 2 -10.682 -23 22.924 1 46.53 ? N1 XWW 2135 B 1 HETATM 5 C C4 XWW . . . G 2 -10.414 -21.692 22.938 1 41.8 ? C4 XWW 2135 B 1 HETATM 6 C C5 XWW . . . G 2 -9.133 -21.266 22.689 1 43.81 ? C5 XWW 2135 B 1 HETATM 7 C C6 XWW . . . G 2 -8.128 -22.18 22.422 1 44.2 ? C6 XWW 2135 B 1 HETATM 8 N N2 XWW . . . G 2 -8.353 -23.493 22.402 1 43.62 ? N2 XWW 2135 B 1 HETATM 9 F F1 XWW . . . G 2 -8.862 -19.961 22.707 1 48.29 ? F1 XWW 2135 B 1 HETATM 10 N N3 XWW . . . G 2 -10.903 -25.572 23.682 1 43.71 ? N3 XWW 2135 B 1 HETATM 11 C C7 XWW . . . G 2 -10.425 -25.673 25.006 1 39.68 ? C7 XWW 2135 B 1 HETATM 12 N N4 XWW . . . G 2 -9.184 -25.295 25.362 1 36.36 ? N4 XWW 2135 B 1 HETATM 13 C C8 XWW . . . G 2 -8.912 -25.467 26.667 1 34.85 ? C8 XWW 2135 B 1 HETATM 14 N N5 XWW . . . G 2 -9.775 -25.966 27.557 1 35.29 ? N5 XWW 2135 B 1 HETATM 15 C C9 XWW . . . G 2 -10.994 -26.326 27.135 1 37.74 ? C9 XWW 2135 B 1 HETATM 16 N N6 XWW . . . G 2 -11.338 -26.179 25.85 1 37.07 ? N6 XWW 2135 B 1 HETATM 17 N N7 XWW . . . G 2 -11.934 -26.867 28.076 1 40.94 ? N7 XWW 2135 B 1 HETATM 18 C C10 XWW . . . G 2 -11.291 -27.852 28.961 1 41.8 ? C10 XWW 2135 B 1 HETATM 19 C C11 XWW . . . G 2 -12.296 -28.67 29.767 1 41.7 ? C11 XWW 2135 B 1 HETATM 20 O O1 XWW . . . G 2 -13.311 -29.268 28.935 1 42.09 ? O1 XWW 2135 B 1 HETATM 21 C C12 XWW . . . G 2 -14.042 -28.257 28.225 1 43.37 ? C12 XWW 2135 B 1 HETATM 22 C C13 XWW . . . G 2 -13.159 -27.317 27.396 1 41.61 ? C13 XWW 2135 B 1 HETATM 23 N N8 XWW . . . G 2 -7.666 -25.121 27.198 1 33.73 ? N8 XWW 2135 B 1 HETATM 24 C C14 XWW . . . G 2 -6.647 -24.652 26.444 1 34.73 ? C14 XWW 2135 B 1 HETATM 25 C C15 XWW . . . G 2 -6.739 -24.435 25.088 1 34.47 ? C15 XWW 2135 B 1 HETATM 26 N N9 XWW . . . G 2 -5.499 -23.97 24.768 1 36.26 ? N9 XWW 2135 B 1 HETATM 27 C C16 XWW . . . G 2 -4.724 -23.924 25.902 1 34.59 ? C16 XWW 2135 B 1 HETATM 28 N N10 XWW . . . G 2 -5.403 -24.337 26.955 1 33.69 ? N10 XWW 2135 B 1 HETATM 29 C C17 XWW . . . G 2 -5.097 -23.597 23.419 1 36.61 ? C17 XWW 2135 B 1 # _model_server_stats.io_time_ms 17 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 280 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 29 #