data_4C7P # _model_server_result.job_id R9M_33adVmLAM88PsSknvg _model_server_result.datetime_utc '2024-11-05 01:14:37' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4c7p # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1348}' # _entry.id 4C7P # _exptl.entry_id 4C7P _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4C7P _cell.length_a 78.265 _cell.length_b 78.265 _cell.length_c 115.01 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4C7P _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 129 n n C1 C2 GOL sing 130 n n C1 H11 GOL sing 131 n n C1 H12 GOL sing 132 n n O1 HO1 GOL sing 133 n n C2 O2 GOL sing 134 n n C2 C3 GOL sing 135 n n C2 H2 GOL sing 136 n n O2 HO2 GOL sing 137 n n C3 O3 GOL sing 138 n n C3 H31 GOL sing 139 n n C3 H32 GOL sing 140 n n O3 HO3 GOL sing 141 n n # _atom_sites.entry_id 4C7P _atom_sites.fract_transf_matrix[1][1] 0.012777 _atom_sites.fract_transf_matrix[1][2] 0.007377 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014754 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008695 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # _pdbx_nonpoly_scheme.asym_id B _pdbx_nonpoly_scheme.entity_id 2 _pdbx_nonpoly_scheme.mon_id GOL _pdbx_nonpoly_scheme.pdb_strand_id A _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 1348 _pdbx_nonpoly_scheme.auth_seq_num 1348 _pdbx_nonpoly_scheme.pdb_mon_id GOL _pdbx_nonpoly_scheme.auth_mon_id GOL _pdbx_nonpoly_scheme.pdb_ins_code . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . B 2 13.909 31.071 -4.731 1 128.29 ? C1 GOL 1348 A 1 HETATM 2 O O1 GOL . . . B 2 14.734 32.098 -5.275 1 127.16 ? O1 GOL 1348 A 1 HETATM 3 C C2 GOL . . . B 2 13.008 31.629 -3.65 1 129.44 ? C2 GOL 1348 A 1 HETATM 4 O O2 GOL . . . B 2 13.688 31.616 -2.382 1 128.72 ? O2 GOL 1348 A 1 HETATM 5 C C3 GOL . . . B 2 11.672 30.922 -3.537 1 128.84 ? C3 GOL 1348 A 1 HETATM 6 O O3 GOL . . . B 2 10.629 31.852 -3.236 1 127.3 ? O3 GOL 1348 A 1 HETATM 7 H H11 GOL . . . B 2 14.525 30.259 -4.346 1 128.34 ? H11 GOL 1348 A 1 HETATM 8 H H12 GOL . . . B 2 13.327 30.627 -5.538 1 128.05 ? H12 GOL 1348 A 1 HETATM 9 H HO1 GOL . . . B 2 15.205 32.519 -4.509 1 127.1 ? HO1 GOL 1348 A 1 HETATM 10 H H2 GOL . . . B 2 12.866 32.699 -3.789 1 129.64 ? H2 GOL 1348 A 1 HETATM 11 H HO2 GOL . . . B 2 13.883 30.676 -2.128 1 128.47 ? HO2 GOL 1348 A 1 HETATM 12 H H31 GOL . . . B 2 11.708 30.141 -2.779 1 128.89 ? H31 GOL 1348 A 1 HETATM 13 H H32 GOL . . . B 2 11.426 30.404 -4.462 1 128.74 ? H32 GOL 1348 A 1 HETATM 14 H HO3 GOL . . . B 2 10.856 32.253 -2.357 1 127.24 ? HO3 GOL 1348 A 1 # _model_server_stats.io_time_ms 68 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 312 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 14 #