data_4C9H # _model_server_result.job_id CnaQXxqg1dJ96pOvfs3i0Q _model_server_result.datetime_utc '2024-11-23 21:56:52' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4c9h # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":1319}' # _entry.id 4C9H # _exptl.entry_id 4C9H _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 494.573 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 5-CYCLOHEXYL-1-PENTYL-BETA-D-MALTOSIDE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4C9H _cell.length_a 67.354 _cell.length_b 98.203 _cell.length_c 105.061 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4C9H _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G 1 1 B,H,I,J,K 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id G _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C23 H42 O11' _chem_comp.formula_weight 494.573 _chem_comp.id CM5 _chem_comp.mon_nstd_flag . _chem_comp.name 5-CYCLOHEXYL-1-PENTYL-BETA-D-MALTOSIDE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms '5-CYCLOHEXYLPENTYL 4-O-ALPHA-D-GLUCOPYRANOSYL-BETA-D-GLUCOPYRANOSIDE;CYMAL-5' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C7 C8 CM5 sing 325 n n C7 C6 CM5 sing 326 n n C7 H71 CM5 sing 327 n n C7 H72 CM5 sing 328 n n C8 C9 CM5 sing 329 n n C8 H81 CM5 sing 330 n n C8 H82 CM5 sing 331 n n C9 C10 CM5 sing 332 n n C9 H91 CM5 sing 333 n n C9 H92 CM5 sing 334 n n C10 C11 CM5 sing 335 n n C10 H101 CM5 sing 336 n n C10 H102 CM5 sing 337 n n C11 C6 CM5 sing 338 n n C11 H111 CM5 sing 339 n n C11 H112 CM5 sing 340 n n C6 C5 CM5 sing 341 n n C6 H6 CM5 sing 342 n n C5 C4 CM5 sing 343 n n C5 H51 CM5 sing 344 n n C5 H52 CM5 sing 345 n n C4 C3 CM5 sing 346 n n C4 H41 CM5 sing 347 n n C4 H42 CM5 sing 348 n n C3 C2 CM5 sing 349 n n C3 H31A CM5 sing 350 n n C3 H32A CM5 sing 351 n n C2 C1 CM5 sing 352 n n C2 H21A CM5 sing 353 n n C2 H22A CM5 sing 354 n n C1 O12 CM5 sing 355 n n C1 H11 CM5 sing 356 n n C1 H12 CM5 sing 357 n n O12 C13 CM5 sing 358 n n C13 C18 CM5 sing 359 n n C13 O14 CM5 sing 360 n n C13 H13 CM5 sing 361 n n C18 O22 CM5 sing 362 n n C18 C17 CM5 sing 363 n n C18 H18 CM5 sing 364 n n O22 H22 CM5 sing 365 n n C17 O21 CM5 sing 366 n n C17 C16 CM5 sing 367 n n C17 H17 CM5 sing 368 n n O21 H21 CM5 sing 369 n n O14 C15 CM5 sing 370 n n C15 C19 CM5 sing 371 n n C15 C16 CM5 sing 372 n n C15 H15 CM5 sing 373 n n C19 O20 CM5 sing 374 n n C19 H191 CM5 sing 375 n n C19 H192 CM5 sing 376 n n O20 H20 CM5 sing 377 n n C16 O23 CM5 sing 378 n n C16 H16 CM5 sing 379 n n O23 C24 CM5 sing 380 n n C24 O25 CM5 sing 381 n n C24 C29 CM5 sing 382 n n C24 H24 CM5 sing 383 n n O25 C26 CM5 sing 384 n n C26 C30 CM5 sing 385 n n C26 C27 CM5 sing 386 n n C26 H26 CM5 sing 387 n n C30 O31 CM5 sing 388 n n C30 H301 CM5 sing 389 n n C30 H302 CM5 sing 390 n n O31 H31 CM5 sing 391 n n C27 O32 CM5 sing 392 n n C27 C28 CM5 sing 393 n n C27 H27 CM5 sing 394 n n O32 H32 CM5 sing 395 n n C28 O33 CM5 sing 396 n n C28 C29 CM5 sing 397 n n C28 H28 CM5 sing 398 n n O33 H33 CM5 sing 399 n n C29 O34 CM5 sing 400 n n C29 H29 CM5 sing 401 n n O34 H34 CM5 sing 402 n n # _atom_sites.entry_id 4C9H _atom_sites.fract_transf_matrix[1][1] 0.014847 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010183 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009518 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CXT A 1 401 401 CXT CXT . D 3 CDL A 1 800 800 CDL CDL . E 3 CDL A 1 801 801 CDL CDL . F 3 CDL A 1 802 802 CDL CDL . G 4 CM5 A 1 1319 1319 CM5 CM5 . H 2 CXT B 1 401 401 CXT CXT . I 3 CDL B 1 800 800 CDL CDL . J 3 CDL B 1 801 801 CDL CDL . K 3 CDL B 1 802 802 CDL CDL . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C7 CM5 . . . G 4 -2.497 12.465 8.144 1 35.93 ? C7 CM5 1319 A 1 HETATM 2 C C8 CM5 . . . G 4 -2.166 11.893 6.77 1 42.3 ? C8 CM5 1319 A 1 HETATM 3 C C9 CM5 . . . G 4 -1.37 10.598 6.894 1 38.45 ? C9 CM5 1319 A 1 HETATM 4 C C10 CM5 . . . G 4 -2.11 9.589 7.764 1 41.35 ? C10 CM5 1319 A 1 HETATM 5 C C11 CM5 . . . G 4 -2.43 10.185 9.131 1 31.77 ? C11 CM5 1319 A 1 HETATM 6 C C6 CM5 . . . G 4 -3.267 11.451 8.983 1 29.84 ? C6 CM5 1319 A 1 HETATM 7 C C5 CM5 . . . G 4 -3.568 12.043 10.355 1 23.47 ? C5 CM5 1319 A 1 HETATM 8 C C4 CM5 . . . G 4 -4.06 10.969 11.317 1 18.34 ? C4 CM5 1319 A 1 HETATM 9 C C3 CM5 . . . G 4 -4.759 11.58 12.526 1 29.84 ? C3 CM5 1319 A 1 HETATM 10 C C2 CM5 . . . G 4 -4.449 10.786 13.789 1 36.33 ? C2 CM5 1319 A 1 HETATM 11 C C1 CM5 . . . G 4 -5.619 10.799 14.766 1 26.01 ? C1 CM5 1319 A 1 HETATM 12 O O12 CM5 . . . G 4 -6.596 9.851 14.339 1 34.54 ? O12 CM5 1319 A 1 HETATM 13 C C13 CM5 . . . G 4 -7.12 9.109 15.437 1 32.98 ? C13 CM5 1319 A 1 HETATM 14 C C18 CM5 . . . G 4 -8.008 7.983 14.916 1 30.28 ? C18 CM5 1319 A 1 HETATM 15 O O22 CM5 . . . G 4 -9.145 8.532 14.241 1 37.08 ? O22 CM5 1319 A 1 HETATM 16 C C17 CM5 . . . G 4 -8.471 7.105 16.072 1 30.93 ? C17 CM5 1319 A 1 HETATM 17 O O21 CM5 . . . G 4 -9.245 6.007 15.575 1 28.57 ? O21 CM5 1319 A 1 HETATM 18 O O14 CM5 . . . G 4 -6.032 8.559 16.181 1 27.42 ? O14 CM5 1319 A 1 HETATM 19 C C15 CM5 . . . G 4 -6.452 7.805 17.318 1 23.93 ? C15 CM5 1319 A 1 HETATM 20 C C19 CM5 . . . G 4 -5.229 7.385 18.125 1 22.93 ? C19 CM5 1319 A 1 HETATM 21 O O20 CM5 . . . G 4 -4.76 8.494 18.9 1 25.11 ? O20 CM5 1319 A 1 HETATM 22 C C16 CM5 . . . G 4 -7.261 6.601 16.848 1 35.5 ? C16 CM5 1319 A 1 HETATM 23 O O23 CM5 . . . G 4 -7.683 5.816 17.963 1 42.99 ? O23 CM5 1319 A 1 HETATM 24 C C24 CM5 . . . G 4 -7.52 4.416 17.727 1 41.29 ? C24 CM5 1319 A 1 HETATM 25 O O25 CM5 . . . G 4 -6.259 3.984 18.239 1 41.43 ? O25 CM5 1319 A 1 HETATM 26 C C26 CM5 . . . G 4 -6.099 4.282 19.627 1 40.51 ? C26 CM5 1319 A 1 HETATM 27 C C30 CM5 . . . G 4 -4.68 3.923 20.056 1 35.61 ? C30 CM5 1319 A 1 HETATM 28 O O31 CM5 . . . G 4 -4.155 2.925 19.174 1 30.74 ? O31 CM5 1319 A 1 HETATM 29 C C27 CM5 . . . G 4 -7.148 3.54 20.45 1 36.48 ? C27 CM5 1319 A 1 HETATM 30 O O32 CM5 . . . G 4 -7.038 3.925 21.824 1 35.67 ? O32 CM5 1319 A 1 HETATM 31 C C28 CM5 . . . G 4 -8.548 3.866 19.94 1 39.74 ? C28 CM5 1319 A 1 HETATM 32 O O33 CM5 . . . G 4 -9.516 3.043 20.605 1 39.95 ? O33 CM5 1319 A 1 HETATM 33 C C29 CM5 . . . G 4 -8.628 3.644 18.434 1 39.03 ? C29 CM5 1319 A 1 HETATM 34 O O34 CM5 . . . G 4 -9.903 4.072 17.943 1 37.54 ? O34 CM5 1319 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 14 _model_server_stats.query_time_ms 284 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 34 #