data_4CCZ # _model_server_result.job_id iXWqp7jHtrKgDifmhitO8Q _model_server_result.datetime_utc '2024-12-26 11:21:12' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4ccz # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1652}' # _entry.id 4CCZ # _exptl.entry_id 4CCZ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 445.429 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (6S)-5,6,7,8-TETRAHYDROFOLATE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4CCZ _cell.length_a 166.803 _cell.length_b 166.803 _cell.length_c 166.803 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4CCZ _symmetry.cell_setting ? _symmetry.Int_Tables_number 197 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'I 2 3' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id disulf _struct_conn.details ? _struct_conn.id disulf1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 247 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 260 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_atom_id SG _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 310 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 323 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.033 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C19 H23 N7 O6' _chem_comp.formula_weight 445.429 _chem_comp.id THG _chem_comp.mon_nstd_flag . _chem_comp.name (6S)-5,6,7,8-TETRAHYDROFOLATE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N3 C2 THG sing 290 n y N3 C4 THG sing 291 n y N3 HN3 THG sing 292 n n C2 N1 THG doub 293 n y C2 N2 THG sing 294 n n N1 C8A THG sing 295 n y C8A C4A THG doub 296 n y C8A N8 THG sing 297 n n C4A C4 THG sing 298 n y C4A N5 THG sing 299 n n C4 O4 THG doub 300 n n N8 C7 THG sing 301 n n N8 HN8 THG sing 302 n n C7 C6 THG sing 303 n n C7 HC71 THG sing 304 n n C7 HC72 THG sing 305 n n C6 N5 THG sing 306 n n C6 C9 THG sing 307 n n C6 HC6 THG sing 308 n n N5 HN5 THG sing 309 n n C9 N10 THG sing 310 n n C9 HC91 THG sing 311 n n C9 HC92 THG sing 312 n n N10 C4' THG sing 313 n n N10 H10 THG sing 314 n n C4' C3' THG doub 315 n y C4' C5' THG sing 316 n y C3' C2' THG sing 317 n y C3' HC3 THG sing 318 n n C2' C1' THG doub 319 n y C2' HC2 THG sing 320 n n C1' C6' THG sing 321 n y C1' C11 THG sing 322 n n C6' C5' THG doub 323 n y C6' HC61 THG sing 324 n n C5' HC5 THG sing 325 n n C11 N THG sing 326 n n C11 O11 THG doub 327 n n N CA THG sing 328 n n N HN THG sing 329 n n CA C THG sing 330 n n CA CB THG sing 331 n n CA HCA THG sing 332 n n C OX2 THG sing 333 n n C OX1 THG doub 334 n n OX2 HX2 THG sing 335 n n CB CG THG sing 336 n n CB HCB1 THG sing 337 n n CB HCB2 THG sing 338 n n CG CD THG sing 339 n n CG HCG1 THG sing 340 n n CG HCG2 THG sing 341 n n CD OE1 THG doub 342 n n CD OE2 THG sing 343 n n OE2 HE2 THG sing 344 n n N2 HN21 THG sing 345 n n N2 HN22 THG sing 346 n n # _atom_sites.entry_id 4CCZ _atom_sites.fract_transf_matrix[1][1] 0.005995 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005995 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005995 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 THG A 1 1652 1652 THG THG . C 3 HOH A 1 2001 2001 HOH HOH . C 3 HOH A 2 2002 2002 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N3 THG . . . B 2 -34.234 46.322 2.807 1 76.46 ? N3 THG 1652 A 1 HETATM 2 C C2 THG . . . B 2 -34.865 45.641 1.813 1 82.31 ? C2 THG 1652 A 1 HETATM 3 N N1 THG . . . B 2 -34.223 45.215 0.711 1 73.72 ? N1 THG 1652 A 1 HETATM 4 C C8A THG . . . B 2 -32.919 45.434 0.53 1 66.62 ? C8A THG 1652 A 1 HETATM 5 C C4A THG . . . B 2 -32.163 46.187 1.558 1 69.8 ? C4A THG 1652 A 1 HETATM 6 C C4 THG . . . B 2 -32.918 46.619 2.755 1 69.25 ? C4 THG 1652 A 1 HETATM 7 N N8 THG . . . B 2 -32.298 45.02 -0.596 1 67.7 ? N8 THG 1652 A 1 HETATM 8 C C7 THG . . . B 2 -30.921 45.408 -0.861 1 79.25 ? C7 THG 1652 A 1 HETATM 9 C C6 THG . . . B 2 -30.131 45.569 0.436 1 72.57 ? C6 THG 1652 A 1 HETATM 10 N N5 THG . . . B 2 -30.836 46.371 1.417 1 61.32 ? N5 THG 1652 A 1 HETATM 11 C C9 THG . . . B 2 -29.916 44.183 1.046 1 70.61 ? C9 THG 1652 A 1 HETATM 12 N N10 THG . . . B 2 -28.841 43.46 0.393 1 68.92 ? N10 THG 1652 A 1 HETATM 13 C C4' THG . . . B 2 -27.526 43.673 0.656 1 83.86 ? C4' THG 1652 A 1 HETATM 14 C C3' THG . . . B 2 -27.087 44.655 1.548 1 77.54 ? C3' THG 1652 A 1 HETATM 15 C C2' THG . . . B 2 -25.728 44.828 1.789 1 88.48 ? C2' THG 1652 A 1 HETATM 16 C C1' THG . . . B 2 -24.792 44.02 1.148 1 86.41 ? C1' THG 1652 A 1 HETATM 17 C C6' THG . . . B 2 -25.227 43.038 0.26 1 93.05 ? C6' THG 1652 A 1 HETATM 18 C C5' THG . . . B 2 -26.586 42.866 0.017 1 83.22 ? C5' THG 1652 A 1 HETATM 19 C C11 THG . . . B 2 -23.329 44.225 1.421 1 99.35 ? C11 THG 1652 A 1 HETATM 20 N N THG . . . B 2 -22.451 44.09 0.422 1 96.24 ? N THG 1652 A 1 HETATM 21 C CA THG . . . B 2 -21.035 44.357 0.595 1 91.87 ? CA THG 1652 A 1 HETATM 22 C C THG . . . B 2 -20.815 45.819 0.862 1 97.91 ? C THG 1652 A 1 HETATM 23 O OX2 THG . . . B 2 -20.279 46.149 1.941 1 94.44 ? OX2 THG 1652 A 1 HETATM 24 O OX1 THG . . . B 2 -21.191 46.652 0.008 1 81.87 ? OX1 THG 1652 A 1 HETATM 25 C CB THG . . . B 2 -20.244 43.926 -0.639 1 101.89 ? CB THG 1652 A 1 HETATM 26 C CG THG . . . B 2 -20.067 42.408 -0.685 1 109.69 ? CG THG 1652 A 1 HETATM 27 C CD THG . . . B 2 -19.301 41.962 -1.917 1 110.57 ? CD THG 1652 A 1 HETATM 28 O OE1 THG . . . B 2 -19.087 40.738 -2.066 1 95.09 ? OE1 THG 1652 A 1 HETATM 29 O OE2 THG . . . B 2 -18.904 42.813 -2.745 1 116.51 ? OE2 THG 1652 A 1 HETATM 30 O O11 THG . . . B 2 -22.987 44.538 2.552 1 95.75 ? O11 THG 1652 A 1 HETATM 31 O O4 THG . . . B 2 -32.372 47.246 3.687 1 74.64 ? O4 THG 1652 A 1 HETATM 32 N N2 THG . . . B 2 -36.192 45.385 1.939 1 85.72 ? N2 THG 1652 A 1 # _model_server_stats.io_time_ms 68 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 305 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 32 #