data_4CD1 # _model_server_result.job_id hplAUF4leFEb_UFUu9uNZQ _model_server_result.datetime_utc '2024-10-31 08:23:45' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4cd1 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":1453}' # _entry.id 4CD1 # _exptl.entry_id 4CD1 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 408.427 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1-AMINO-4-(3-METHYLPHENYL)AMINO-9,10-DIOXO-9,10-DIHYDROANTHRACENE-2-SULFONATE _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4CD1 _cell.length_a 41.007 _cell.length_b 68.04 _cell.length_c 162.389 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4CD1 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 70 A CYS 75 1_555 A SG CYS 94 A CYS 99 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? disulf ? disulf2 A SG CYS 237 A CYS 242 1_555 A SG CYS 279 A CYS 284 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.053 ? disulf ? disulf3 A SG CYS 260 A CYS 265 1_555 A SG CYS 305 A CYS 310 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.101 ? disulf ? disulf4 A SG CYS 318 A CYS 323 1_555 A SG CYS 323 A CYS 328 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.016 ? disulf ? disulf5 A SG CYS 372 A CYS 377 1_555 A SG CYS 394 A CYS 399 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.057 ? # _chem_comp.formula 'C21 H16 N2 O5 S' _chem_comp.formula_weight 408.427 _chem_comp.id 8E9 _chem_comp.mon_nstd_flag . _chem_comp.name 1-AMINO-4-(3-METHYLPHENYL)AMINO-9,10-DIOXO-9,10-DIHYDROANTHRACENE-2-SULFONATE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4CD1 _atom_sites.fract_transf_matrix[1][1] 0.024386 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014697 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006158 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 8E9 A 1 1452 1452 8E9 8E9 . C 2 8E9 A 1 1453 1453 8E9 8E9 . D 3 HOH A 1 2001 2001 HOH HOH . D 3 HOH A 2 2002 2002 HOH HOH . D 3 HOH A 3 2003 2003 HOH HOH . D 3 HOH A 4 2004 2004 HOH HOH . D 3 HOH A 5 2005 2005 HOH HOH . D 3 HOH A 6 2006 2006 HOH HOH . D 3 HOH A 7 2007 2007 HOH HOH . D 3 HOH A 8 2008 2008 HOH HOH . D 3 HOH A 9 2009 2009 HOH HOH . D 3 HOH A 10 2010 2010 HOH HOH . D 3 HOH A 11 2011 2011 HOH HOH . D 3 HOH A 12 2012 2012 HOH HOH . D 3 HOH A 13 2013 2013 HOH HOH . D 3 HOH A 14 2014 2014 HOH HOH . D 3 HOH A 15 2015 2015 HOH HOH . D 3 HOH A 16 2016 2016 HOH HOH . D 3 HOH A 17 2017 2017 HOH HOH . D 3 HOH A 18 2018 2018 HOH HOH . D 3 HOH A 19 2019 2019 HOH HOH . D 3 HOH A 20 2020 2020 HOH HOH . D 3 HOH A 21 2021 2021 HOH HOH . D 3 HOH A 22 2022 2022 HOH HOH . D 3 HOH A 23 2023 2023 HOH HOH . D 3 HOH A 24 2024 2024 HOH HOH . D 3 HOH A 25 2025 2025 HOH HOH . D 3 HOH A 26 2026 2026 HOH HOH . D 3 HOH A 27 2027 2027 HOH HOH . D 3 HOH A 28 2028 2028 HOH HOH . D 3 HOH A 29 2029 2029 HOH HOH . D 3 HOH A 30 2030 2030 HOH HOH . D 3 HOH A 31 2031 2031 HOH HOH . D 3 HOH A 32 2032 2032 HOH HOH . D 3 HOH A 33 2033 2033 HOH HOH . D 3 HOH A 34 2034 2034 HOH HOH . D 3 HOH A 35 2035 2035 HOH HOH . D 3 HOH A 36 2036 2036 HOH HOH . D 3 HOH A 37 2037 2037 HOH HOH . D 3 HOH A 38 2038 2038 HOH HOH . D 3 HOH A 39 2039 2039 HOH HOH . D 3 HOH A 40 2040 2040 HOH HOH . D 3 HOH A 41 2041 2041 HOH HOH . D 3 HOH A 42 2042 2042 HOH HOH . D 3 HOH A 43 2043 2043 HOH HOH . D 3 HOH A 44 2044 2044 HOH HOH . D 3 HOH A 45 2045 2045 HOH HOH . D 3 HOH A 46 2046 2046 HOH HOH . D 3 HOH A 47 2047 2047 HOH HOH . D 3 HOH A 48 2048 2048 HOH HOH . D 3 HOH A 49 2049 2049 HOH HOH . D 3 HOH A 50 2050 2050 HOH HOH . D 3 HOH A 51 2051 2051 HOH HOH . D 3 HOH A 52 2052 2052 HOH HOH . D 3 HOH A 53 2053 2053 HOH HOH . D 3 HOH A 54 2054 2054 HOH HOH . D 3 HOH A 55 2055 2055 HOH HOH . D 3 HOH A 56 2056 2056 HOH HOH . D 3 HOH A 57 2057 2057 HOH HOH . D 3 HOH A 58 2058 2058 HOH HOH . D 3 HOH A 59 2059 2059 HOH HOH . D 3 HOH A 60 2060 2060 HOH HOH . D 3 HOH A 61 2061 2061 HOH HOH . D 3 HOH A 62 2062 2062 HOH HOH . D 3 HOH A 63 2063 2063 HOH HOH . D 3 HOH A 64 2064 2064 HOH HOH . D 3 HOH A 65 2065 2065 HOH HOH . D 3 HOH A 66 2066 2066 HOH HOH . D 3 HOH A 67 2067 2067 HOH HOH . D 3 HOH A 68 2068 2068 HOH HOH . D 3 HOH A 69 2069 2069 HOH HOH . D 3 HOH A 70 2070 2070 HOH HOH . D 3 HOH A 71 2071 2071 HOH HOH . D 3 HOH A 72 2072 2072 HOH HOH . D 3 HOH A 73 2073 2073 HOH HOH . D 3 HOH A 74 2074 2074 HOH HOH . D 3 HOH A 75 2075 2075 HOH HOH . D 3 HOH A 76 2076 2076 HOH HOH . D 3 HOH A 77 2077 2077 HOH HOH . D 3 HOH A 78 2078 2078 HOH HOH . D 3 HOH A 79 2079 2079 HOH HOH . D 3 HOH A 80 2080 2080 HOH HOH . D 3 HOH A 81 2081 2081 HOH HOH . D 3 HOH A 82 2082 2082 HOH HOH . D 3 HOH A 83 2083 2083 HOH HOH . D 3 HOH A 84 2084 2084 HOH HOH . D 3 HOH A 85 2085 2085 HOH HOH . D 3 HOH A 86 2086 2086 HOH HOH . D 3 HOH A 87 2087 2087 HOH HOH . D 3 HOH A 88 2088 2088 HOH HOH . D 3 HOH A 89 2089 2089 HOH HOH . D 3 HOH A 90 2090 2090 HOH HOH . D 3 HOH A 91 2091 2091 HOH HOH . D 3 HOH A 92 2092 2092 HOH HOH . D 3 HOH A 93 2093 2093 HOH HOH . D 3 HOH A 94 2094 2094 HOH HOH . D 3 HOH A 95 2095 2095 HOH HOH . D 3 HOH A 96 2096 2096 HOH HOH . D 3 HOH A 97 2097 2097 HOH HOH . D 3 HOH A 98 2098 2098 HOH HOH . D 3 HOH A 99 2099 2099 HOH HOH . D 3 HOH A 100 2100 2100 HOH HOH . D 3 HOH A 101 2101 2101 HOH HOH . D 3 HOH A 102 2102 2102 HOH HOH . D 3 HOH A 103 2103 2103 HOH HOH . D 3 HOH A 104 2104 2104 HOH HOH . D 3 HOH A 105 2105 2105 HOH HOH . D 3 HOH A 106 2106 2106 HOH HOH . D 3 HOH A 107 2107 2107 HOH HOH . D 3 HOH A 108 2108 2108 HOH HOH . D 3 HOH A 109 2109 2109 HOH HOH . D 3 HOH A 110 2110 2110 HOH HOH . D 3 HOH A 111 2111 2111 HOH HOH . D 3 HOH A 112 2112 2112 HOH HOH . D 3 HOH A 113 2113 2113 HOH HOH . D 3 HOH A 114 2114 2114 HOH HOH . D 3 HOH A 115 2115 2115 HOH HOH . D 3 HOH A 116 2116 2116 HOH HOH . D 3 HOH A 117 2117 2117 HOH HOH . D 3 HOH A 118 2118 2118 HOH HOH . D 3 HOH A 119 2119 2119 HOH HOH . D 3 HOH A 120 2120 2120 HOH HOH . D 3 HOH A 121 2121 2121 HOH HOH . D 3 HOH A 122 2122 2122 HOH HOH . D 3 HOH A 123 2123 2123 HOH HOH . D 3 HOH A 124 2124 2124 HOH HOH . D 3 HOH A 125 2125 2125 HOH HOH . D 3 HOH A 126 2126 2126 HOH HOH . D 3 HOH A 127 2127 2127 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O16 8E9 . A . C 2 32.709 34.138 22.392 0.5 45.76 ? O16 8E9 1453 A 1 HETATM 2 O O16 8E9 . B . C 2 27.741 31.315 24.19 0.5 36.28 ? O16 8E9 1453 A 1 HETATM 3 C C10 8E9 . A . C 2 31.796 33.454 22.886 0.5 47.78 ? C10 8E9 1453 A 1 HETATM 4 C C10 8E9 . B . C 2 28.961 31.373 24.522 0.5 40.71 ? C10 8E9 1453 A 1 HETATM 5 C C14 8E9 . A . C 2 32.056 32.732 24.157 0.5 47.65 ? C14 8E9 1453 A 1 HETATM 6 C C14 8E9 . B . C 2 29.49 30.606 25.702 0.5 42.28 ? C14 8E9 1453 A 1 HETATM 7 C C5 8E9 . A . C 2 33.301 32.834 24.772 0.5 48.04 ? C5 8E9 1453 A 1 HETATM 8 C C5 8E9 . B . C 2 28.645 29.821 26.481 0.5 40.54 ? C5 8E9 1453 A 1 HETATM 9 C C6 8E9 . A . C 2 33.518 32.16 25.963 0.5 49.01 ? C6 8E9 1453 A 1 HETATM 10 C C6 8E9 . B . C 2 29.135 29.095 27.569 0.5 42.89 ? C6 8E9 1453 A 1 HETATM 11 C C7 8E9 . A . C 2 32.51 31.364 26.538 0.5 47.44 ? C7 8E9 1453 A 1 HETATM 12 C C7 8E9 . B . C 2 30.491 29.174 27.88 0.5 43.45 ? C7 8E9 1453 A 1 HETATM 13 C C8 8E9 . A . C 2 31.253 31.236 25.955 0.5 47.99 ? C8 8E9 1453 A 1 HETATM 14 C C8 8E9 . B . C 2 31.375 29.985 27.141 0.5 39.31 ? C8 8E9 1453 A 1 HETATM 15 C C13 8E9 . A . C 2 30.978 31.903 24.767 0.5 44.45 ? C13 8E9 1453 A 1 HETATM 16 C C13 8E9 . B . C 2 30.935 30.708 26.051 0.5 43.19 ? C13 8E9 1453 A 1 HETATM 17 C C9 8E9 . A . C 2 29.66 31.792 24.088 0.5 42.46 ? C9 8E9 1453 A 1 HETATM 18 C C9 8E9 . B . C 2 31.857 31.577 25.22 0.5 42.81 ? C9 8E9 1453 A 1 HETATM 19 O O9 8E9 . A . C 2 28.749 31.104 24.569 0.5 49.81 ? O9 8E9 1453 A 1 HETATM 20 O O9 8E9 . B . C 2 33.089 31.711 25.423 0.5 44.82 ? O9 8E9 1453 A 1 HETATM 21 C C11 8E9 . A . C 2 30.482 33.352 22.207 0.5 48.58 ? C11 8E9 1453 A 1 HETATM 22 C C11 8E9 . B . C 2 29.885 32.207 23.719 0.5 41.44 ? C11 8E9 1453 A 1 HETATM 23 C C12 8E9 . A . C 2 29.406 32.514 22.815 0.5 47.12 ? C12 8E9 1453 A 1 HETATM 24 C C12 8E9 . B . C 2 31.31 32.323 24.056 0.5 43.8 ? C12 8E9 1453 A 1 HETATM 25 C C1 8E9 . A . C 2 28.086 32.434 22.107 0.5 47.47 ? C1 8E9 1453 A 1 HETATM 26 C C1 8E9 . B . C 2 32.188 33.175 23.204 0.5 46.79 ? C1 8E9 1453 A 1 HETATM 27 N N1 8E9 . A . C 2 27.026 31.702 22.534 0.5 41.52 ? N1 8E9 1453 A 1 HETATM 28 N N1 8E9 . B . C 2 33.523 33.316 23.46 0.5 41.99 ? N1 8E9 1453 A 1 HETATM 29 C C4 8E9 . A . C 2 30.223 34.079 20.914 0.5 54.17 ? C4 8E9 1453 A 1 HETATM 30 C C4 8E9 . B . C 2 29.359 32.948 22.554 0.5 48.16 ? C4 8E9 1453 A 1 HETATM 31 C C3 8E9 . A . C 2 28.982 33.954 20.318 0.5 51.73 ? C3 8E9 1453 A 1 HETATM 32 C C3 8E9 . B . C 2 30.21 33.758 21.777 0.5 50.39 ? C3 8E9 1453 A 1 HETATM 33 C C2 8E9 . A . C 2 27.952 33.195 20.848 0.5 50.9 ? C2 8E9 1453 A 1 HETATM 34 C C2 8E9 . B . C 2 31.582 33.907 22.058 0.5 46.59 ? C2 8E9 1453 A 1 HETATM 35 S S2 8E9 . A . C 2 26.591 33.157 20.032 0.5 53.9 ? S2 8E9 1453 A 1 HETATM 36 S S2 8E9 . B . C 2 32.616 34.768 21.178 0.5 58.39 ? S2 8E9 1453 A 1 HETATM 37 O OS2 8E9 . A . C 2 26.865 33.896 18.798 0.5 46.3 ? OS2 8E9 1453 A 1 HETATM 38 O OS2 8E9 . B . C 2 32.579 36.246 21.363 0.5 54.53 ? OS2 8E9 1453 A 1 HETATM 39 O OS1 8E9 . A . C 2 25.514 33.774 20.812 0.5 49.15 ? OS1 8E9 1453 A 1 HETATM 40 O OS1 8E9 . B . C 2 32.425 34.508 19.726 0.5 55.85 ? OS1 8E9 1453 A 1 HETATM 41 O OS3 8E9 . A . C 2 26.253 31.734 19.738 0.5 53.61 ? OS3 8E9 1453 A 1 HETATM 42 O OS3 8E9 . B . C 2 33.951 34.247 21.599 0.5 51.75 ? OS3 8E9 1453 A 1 HETATM 43 N N4 8E9 . A . C 2 31.162 34.866 20.302 0.5 58.09 ? N4 8E9 1453 A 1 HETATM 44 N N4 8E9 . B . C 2 28.021 32.813 22.344 0.5 50.87 ? N4 8E9 1453 A 1 HETATM 45 C C1' 8E9 . A . C 2 30.924 35.081 18.974 0.5 62.19 ? C1' 8E9 1453 A 1 HETATM 46 C C1' 8E9 . B . C 2 27.697 32.545 21.078 0.5 54.05 ? C1' 8E9 1453 A 1 HETATM 47 C C6' 8E9 . A . C 2 31.864 34.664 18.024 0.5 61.65 ? C6' 8E9 1453 A 1 HETATM 48 C C6' 8E9 . B . C 2 26.624 31.699 20.841 0.5 50.84 ? C6' 8E9 1453 A 1 HETATM 49 C C5' 8E9 . A . C 2 31.634 34.878 16.664 0.5 64.73 ? C5' 8E9 1453 A 1 HETATM 50 C C5' 8E9 . B . C 2 26.283 31.421 19.519 0.5 53.57 ? C5' 8E9 1453 A 1 HETATM 51 C C4' 8E9 . A . C 2 30.468 35.512 16.239 0.5 61.63 ? C4' 8E9 1453 A 1 HETATM 52 C C4' 8E9 . B . C 2 26.997 31.966 18.456 0.5 56.69 ? C4' 8E9 1453 A 1 HETATM 53 C C3' 8E9 . A . C 2 29.534 35.938 17.181 0.5 61.26 ? C3' 8E9 1453 A 1 HETATM 54 C C3' 8E9 . B . C 2 28.067 32.82 18.708 0.5 57.93 ? C3' 8E9 1453 A 1 HETATM 55 C C7' 8E9 . A . C 2 28.278 36.624 16.72 0.5 56.18 ? C7' 8E9 1453 A 1 HETATM 56 C C7' 8E9 . B . C 2 28.838 33.421 17.55 0.5 64.53 ? C7' 8E9 1453 A 1 HETATM 57 C C2' 8E9 . A . C 2 29.759 35.73 18.542 0.5 62.74 ? C2' 8E9 1453 A 1 HETATM 58 C C2' 8E9 . B . C 2 28.422 33.108 20.026 0.5 54.6 ? C2' 8E9 1453 A 1 # _model_server_stats.io_time_ms 74 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 318 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 58 #