data_4CE9
#
_model_server_result.job_id            qJcuEA6ihBPHhLudKHDxIA 
_model_server_result.datetime_utc      '2024-11-22 04:09:10' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4ce9 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"L","auth_seq_id":1214}' 
#
_entry.id    4CE9 
#
_exptl.entry_id    4CE9 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              550.643 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '(2S)-2-(2-carboxyethyl)-6-{[{2-[(cyclohexylmethyl)carbamoyl]benzyl}(prop-2-en-1-yl)amino]methyl}-2,3-dihydro-1,4-benzodioxine-5-carboxylic acid' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            4CE9 
_cell.length_a            70.79 
_cell.length_b            70.79 
_cell.length_c            66.899 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4CE9 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        144 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 31' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 5 G N N 
? 5 L N N 
#
_chem_comp.formula           'C31 H38 N2 O7' 
_chem_comp.formula_weight    550.643 
_chem_comp.id                O3N 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '(2S)-2-(2-carboxyethyl)-6-{[{2-[(cyclohexylmethyl)carbamoyl]benzyl}(prop-2-en-1-yl)amino]methyl}-2,3-dihydro-1,4-benzodioxine-5-carboxylic acid' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 O3N sing 257 n y 
C1 C3 O3N doub 258 n y 
C2 C4 O3N doub 259 n y 
C3 C7 O3N sing 260 n y 
C4 C9 O3N sing 261 n y 
C5 C6 O3N sing 262 n y 
C5 C10 O3N doub 263 n y 
C6 C11 O3N doub 264 n y 
C7 C9 O3N doub 265 n y 
C7 C15 O3N sing 266 n n 
C8 C10 O3N sing 267 n y 
C8 C12 O3N doub 268 n y 
C8 C16 O3N sing 269 n n 
C9 C26 O3N sing 270 n n 
C10 C27 O3N sing 271 n n 
C11 C12 O3N sing 272 n y 
C11 O40 O3N sing 273 n n 
C12 O39 O3N sing 274 n n 
C13 C14 O3N doub 275 n n 
C14 C28 O3N sing 276 n n 
C15 N32 O3N sing 277 n n 
C15 O36 O3N doub 278 n n 
C16 O34 O3N sing 279 n n 
C16 O37 O3N doub 280 n n 
C17 C29 O3N sing 281 n n 
C17 O35 O3N sing 282 n n 
C17 O38 O3N doub 283 n n 
C18 C19 O3N sing 284 n n 
C18 C20 O3N sing 285 n n 
C19 C21 O3N sing 286 n n 
C20 C22 O3N sing 287 n n 
C21 C24 O3N sing 288 n n 
C22 C24 O3N sing 289 n n 
C23 C25 O3N sing 290 n n 
C23 O39 O3N sing 291 n n 
C24 C30 O3N sing 292 n n 
C25 C31 O3N sing 293 n n 
C25 O40 O3N sing 294 n n 
C26 N33 O3N sing 295 n n 
C27 N33 O3N sing 296 n n 
C28 N33 O3N sing 297 n n 
C29 C31 O3N sing 298 n n 
C30 N32 O3N sing 299 n n 
C1 H1 O3N sing 300 n n 
C2 H2 O3N sing 301 n n 
C3 H3 O3N sing 302 n n 
C4 H4 O3N sing 303 n n 
C5 H5 O3N sing 304 n n 
C6 H6 O3N sing 305 n n 
C26 H261 O3N sing 306 n n 
C26 H262 O3N sing 307 n n 
C27 H271 O3N sing 308 n n 
C27 H272 O3N sing 309 n n 
C13 H131 O3N sing 310 n n 
C13 H132 O3N sing 311 n n 
C14 H14 O3N sing 312 n n 
C28 H281 O3N sing 313 n n 
C28 H282 O3N sing 314 n n 
N32 H32 O3N sing 315 n n 
O34 H34 O3N sing 316 n n 
C29 H291 O3N sing 317 n n 
C29 H292 O3N sing 318 n n 
O35 H35 O3N sing 319 n n 
C18 H181 O3N sing 320 n n 
C18 H182 O3N sing 321 n n 
C19 H191 O3N sing 322 n n 
C19 H192 O3N sing 323 n n 
C20 H201 O3N sing 324 n n 
C20 H202 O3N sing 325 n n 
C21 H211 O3N sing 326 n n 
C21 H212 O3N sing 327 n n 
C22 H221 O3N sing 328 n n 
C22 H222 O3N sing 329 n n 
C24 H24 O3N sing 330 n n 
C23 H231 O3N sing 331 n n 
C23 H232 O3N sing 332 n n 
C25 H25 O3N sing 333 n n 
C30 H301 O3N sing 334 n n 
C30 H302 O3N sing 335 n n 
C31 H311 O3N sing 336 n n 
C31 H312 O3N sing 337 n n 
#
_atom_sites.entry_id                     4CE9 
_atom_sites.fract_transf_matrix[1][1]    0.014126 
_atom_sites.fract_transf_matrix[1][2]    0.008156 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.016312 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.014948 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 SO4 A 1 1210 1210 SO4 SO4 . 
D 2 SO4 A 1 1211 1211 SO4 SO4 . 
E 3 ACY A 1 1212 1212 ACY ACY . 
F 4 GOL A 1 1213 1213 GOL GOL . 
G 5 O3N A 1 1214 1214 O3N O3N . 
H 2 SO4 B 1 1210 1210 SO4 SO4 . 
I 2 SO4 B 1 1211 1211 SO4 SO4 . 
J 3 ACY B 1 1212 1212 ACY ACY . 
K 4 GOL B 1 1213 1213 GOL GOL . 
L 5 O3N B 1 1214 1214 O3N O3N . 
M 6 HOH A 1 2001 2001 HOH HOH . 
M 6 HOH A 2 2002 2002 HOH HOH . 
M 6 HOH A 3 2003 2003 HOH HOH . 
M 6 HOH A 4 2004 2004 HOH HOH . 
M 6 HOH A 5 2005 2005 HOH HOH . 
M 6 HOH A 6 2006 2006 HOH HOH . 
M 6 HOH A 7 2007 2007 HOH HOH . 
M 6 HOH A 8 2008 2008 HOH HOH . 
M 6 HOH A 9 2009 2009 HOH HOH . 
M 6 HOH A 10 2010 2010 HOH HOH . 
M 6 HOH A 11 2011 2011 HOH HOH . 
M 6 HOH A 12 2012 2012 HOH HOH . 
M 6 HOH A 13 2013 2013 HOH HOH . 
M 6 HOH A 14 2014 2014 HOH HOH . 
M 6 HOH A 15 2015 2015 HOH HOH . 
M 6 HOH A 16 2016 2016 HOH HOH . 
M 6 HOH A 17 2017 2017 HOH HOH . 
M 6 HOH A 18 2018 2018 HOH HOH . 
M 6 HOH A 19 2019 2019 HOH HOH . 
M 6 HOH A 20 2020 2020 HOH HOH . 
M 6 HOH A 21 2021 2021 HOH HOH . 
M 6 HOH A 22 2022 2022 HOH HOH . 
M 6 HOH A 23 2023 2023 HOH HOH . 
M 6 HOH A 24 2024 2024 HOH HOH . 
M 6 HOH A 25 2025 2025 HOH HOH . 
M 6 HOH A 26 2026 2026 HOH HOH . 
M 6 HOH A 27 2027 2027 HOH HOH . 
M 6 HOH A 28 2028 2028 HOH HOH . 
M 6 HOH A 29 2029 2029 HOH HOH . 
M 6 HOH A 30 2030 2030 HOH HOH . 
M 6 HOH A 31 2031 2031 HOH HOH . 
M 6 HOH A 32 2032 2032 HOH HOH . 
M 6 HOH A 33 2033 2033 HOH HOH . 
M 6 HOH A 34 2034 2034 HOH HOH . 
M 6 HOH A 35 2035 2035 HOH HOH . 
M 6 HOH A 36 2036 2036 HOH HOH . 
M 6 HOH A 37 2037 2037 HOH HOH . 
M 6 HOH A 38 2038 2038 HOH HOH . 
M 6 HOH A 39 2039 2039 HOH HOH . 
M 6 HOH A 40 2040 2040 HOH HOH . 
M 6 HOH A 41 2041 2041 HOH HOH . 
M 6 HOH A 42 2042 2042 HOH HOH . 
M 6 HOH A 43 2043 2043 HOH HOH . 
M 6 HOH A 44 2044 2044 HOH HOH . 
M 6 HOH A 45 2045 2045 HOH HOH . 
M 6 HOH A 46 2046 2046 HOH HOH . 
M 6 HOH A 47 2047 2047 HOH HOH . 
M 6 HOH A 48 2048 2048 HOH HOH . 
M 6 HOH A 49 2049 2049 HOH HOH . 
M 6 HOH A 50 2050 2050 HOH HOH . 
M 6 HOH A 51 2051 2051 HOH HOH . 
M 6 HOH A 52 2052 2052 HOH HOH . 
M 6 HOH A 53 2053 2053 HOH HOH . 
M 6 HOH A 54 2054 2054 HOH HOH . 
N 6 HOH B 1 2001 2001 HOH HOH . 
N 6 HOH B 2 2002 2002 HOH HOH . 
N 6 HOH B 3 2003 2003 HOH HOH . 
N 6 HOH B 4 2004 2004 HOH HOH . 
N 6 HOH B 5 2005 2005 HOH HOH . 
N 6 HOH B 6 2006 2006 HOH HOH . 
N 6 HOH B 7 2007 2007 HOH HOH . 
N 6 HOH B 8 2008 2008 HOH HOH . 
N 6 HOH B 9 2009 2009 HOH HOH . 
N 6 HOH B 10 2010 2010 HOH HOH . 
N 6 HOH B 11 2011 2011 HOH HOH . 
N 6 HOH B 12 2012 2012 HOH HOH . 
N 6 HOH B 13 2013 2013 HOH HOH . 
N 6 HOH B 14 2014 2014 HOH HOH . 
N 6 HOH B 15 2015 2015 HOH HOH . 
N 6 HOH B 16 2016 2016 HOH HOH . 
N 6 HOH B 17 2017 2017 HOH HOH . 
N 6 HOH B 18 2018 2018 HOH HOH . 
N 6 HOH B 19 2019 2019 HOH HOH . 
N 6 HOH B 20 2020 2020 HOH HOH . 
N 6 HOH B 21 2021 2021 HOH HOH . 
N 6 HOH B 22 2022 2022 HOH HOH . 
N 6 HOH B 23 2023 2023 HOH HOH . 
N 6 HOH B 24 2024 2024 HOH HOH . 
N 6 HOH B 25 2025 2025 HOH HOH . 
N 6 HOH B 26 2026 2026 HOH HOH . 
N 6 HOH B 27 2027 2027 HOH HOH . 
N 6 HOH B 28 2028 2028 HOH HOH . 
N 6 HOH B 29 2029 2029 HOH HOH . 
N 6 HOH B 30 2030 2030 HOH HOH . 
N 6 HOH B 31 2031 2031 HOH HOH . 
N 6 HOH B 32 2032 2032 HOH HOH . 
N 6 HOH B 33 2033 2033 HOH HOH . 
N 6 HOH B 34 2034 2034 HOH HOH . 
N 6 HOH B 35 2035 2035 HOH HOH . 
N 6 HOH B 36 2036 2036 HOH HOH . 
N 6 HOH B 37 2037 2037 HOH HOH . 
N 6 HOH B 38 2038 2038 HOH HOH . 
N 6 HOH B 39 2039 2039 HOH HOH . 
N 6 HOH B 40 2040 2040 HOH HOH . 
N 6 HOH B 41 2041 2041 HOH HOH . 
N 6 HOH B 42 2042 2042 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 O3N . . . L 5 10.596 -47.833 17.727 1 27.84 ? C1 O3N 1214 B 1 
HETATM 2 C C2 O3N . . . L 5 11.479 -48.656 17.064 1 27.69 ? C2 O3N 1214 B 1 
HETATM 3 C C3 O3N . . . L 5 9.584 -47.208 17.014 1 29.23 ? C3 O3N 1214 B 1 
HETATM 4 C C4 O3N . . . L 5 11.356 -48.85 15.702 1 27.07 ? C4 O3N 1214 B 1 
HETATM 5 C C5 O3N . . . L 5 11.578 -45.151 10.462 1 23.51 ? C5 O3N 1214 B 1 
HETATM 6 C C6 O3N . . . L 5 12.436 -44.659 9.487 1 22.2 ? C6 O3N 1214 B 1 
HETATM 7 C C7 O3N . . . L 5 9.465 -47.401 15.647 1 29.14 ? C7 O3N 1214 B 1 
HETATM 8 C C8 O3N . . . L 5 13.427 -45.53 11.937 1 22.06 ? C8 O3N 1214 B 1 
HETATM 9 C C9 O3N . . . L 5 10.354 -48.229 14.984 1 27.97 ? C9 O3N 1214 B 1 
HETATM 10 C C10 O3N . . . L 5 12.057 -45.579 11.694 1 23.65 ? C10 O3N 1214 B 1 
HETATM 11 C C11 O3N . . . L 5 13.79 -44.618 9.729 1 21.19 ? C11 O3N 1214 B 1 
HETATM 12 C C12 O3N . . . L 5 14.286 -45.046 10.954 1 20.49 ? C12 O3N 1214 B 1 
HETATM 13 C C13 O3N . . . L 5 9.311 -49.192 10.178 1 35.39 ? C13 O3N 1214 B 1 
HETATM 14 C C14 O3N . . . L 5 10.475 -49.316 10.82 1 35.63 ? C14 O3N 1214 B 1 
HETATM 15 C C15 O3N . . . L 5 8.374 -46.704 14.916 1 30.52 ? C15 O3N 1214 B 1 
HETATM 16 C C16 O3N . . . L 5 13.979 -45.957 13.25 1 20.1 ? C16 O3N 1214 B 1 
HETATM 17 C C17 O3N . . . L 5 16.867 -45.355 6.161 1 32.69 ? C17 O3N 1214 B 1 
HETATM 18 C C18 O3N . . . L 5 8.753 -42.331 11.23 1 34.73 ? C18 O3N 1214 B 1 
HETATM 19 C C19 O3N . . . L 5 8.742 -41.795 12.5 1 36.13 ? C19 O3N 1214 B 1 
HETATM 20 C C20 O3N . . . L 5 8.253 -43.595 11.007 1 33.59 ? C20 O3N 1214 B 1 
HETATM 21 C C21 O3N . . . L 5 8.239 -42.523 13.554 1 34.92 ? C21 O3N 1214 B 1 
HETATM 22 C C22 O3N . . . L 5 7.764 -44.326 12.066 1 33.94 ? C22 O3N 1214 B 1 
HETATM 23 C C23 O3N . . . L 5 16.394 -44.273 10.318 1 21.35 ? C23 O3N 1214 B 1 
HETATM 24 C C24 O3N . . . L 5 7.755 -43.796 13.339 1 34.99 ? C24 O3N 1214 B 1 
HETATM 25 C C25 O3N . . . L 5 15.942 -44.615 8.935 1 22.74 ? C25 O3N 1214 B 1 
HETATM 26 C C26 O3N . . . L 5 10.272 -48.468 13.514 1 28.4 ? C26 O3N 1214 B 1 
HETATM 27 C C27 O3N . . . L 5 11.092 -46.119 12.718 1 23.78 ? C27 O3N 1214 B 1 
HETATM 28 C C28 O3N . . . L 5 11.289 -48.149 11.245 1 32.09 ? C28 O3N 1214 B 1 
HETATM 29 C C29 O3N . . . L 5 16.631 -43.912 6.575 1 28.86 ? C29 O3N 1214 B 1 
HETATM 30 C C30 O3N . . . L 5 7.224 -44.597 14.492 1 35.1 ? C30 O3N 1214 B 1 
HETATM 31 C C31 O3N . . . L 5 16.963 -43.931 8.047 1 25.5 ? C31 O3N 1214 B 1 
HETATM 32 N N32 O3N . . . L 5 8.276 -45.355 15.14 1 33.12 ? N32 O3N 1214 B 1 
HETATM 33 N N33 O3N . . . L 5 11.196 -47.642 12.664 1 29.71 ? N33 O3N 1214 B 1 
HETATM 34 O O34 O3N . . . L 5 14.9 -45.229 13.712 1 16.45 ? O34 O3N 1214 B 1 
HETATM 35 O O35 O3N . . . L 5 15.921 -45.912 5.533 1 32.73 ? O35 O3N 1214 B 1 
HETATM 36 O O36 O3N . . . L 5 7.633 -47.3 14.153 1 32.67 ? O36 O3N 1214 B 1 
HETATM 37 O O37 O3N . . . L 5 13.466 -46.93 13.852 1 18.83 ? O37 O3N 1214 B 1 
HETATM 38 O O38 O3N . . . L 5 17.994 -45.829 6.473 1 36.31 ? O38 O3N 1214 B 1 
HETATM 39 O O39 O3N . . . L 5 15.647 -45.042 11.257 1 21.07 ? O39 O3N 1214 B 1 
HETATM 40 O O40 O3N . . . L 5 14.597 -44.135 8.713 1 21.2 ? O40 O3N 1214 B 1 
#
_model_server_stats.io_time_ms              54 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    8 
_model_server_stats.query_time_ms           320 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           40 
#