data_4CEE # _model_server_result.job_id t9Aq1_55X4UyLkuK-prMAw _model_server_result.datetime_utc '2024-11-08 03:53:50' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4cee # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":1215}' # _entry.id 4CEE # _exptl.entry_id 4CEE _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 484.541 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(2S)-6-[[[2-[[(2S)-butan-2-yl]carbamoyl]phenyl]methyl-methyl-amino]methyl]-2-(3-hydroxy-3-oxopropyl)-2,3-dihydro-1,4-benzodioxine-5-carboxylic acid' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4CEE _cell.length_a 71.028 _cell.length_b 71.028 _cell.length_c 66.395 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4CEE _symmetry.cell_setting ? _symmetry.Int_Tables_number 144 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 31' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 H N N ? 4 O N N # _chem_comp.formula 'C26 H32 N2 O7' _chem_comp.formula_weight 484.541 _chem_comp.id B0T _chem_comp.mon_nstd_flag . _chem_comp.name '(2S)-6-[[[2-[[(2S)-butan-2-yl]carbamoyl]phenyl]methyl-methyl-amino]methyl]-2-(3-hydroxy-3-oxopropyl)-2,3-dihydro-1,4-benzodioxine-5-carboxylic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O2 C15 B0T doub 76 n n C15 O5 B0T sing 77 n n C15 C25 B0T sing 78 n n C25 C26 B0T sing 79 n n C26 C21 B0T sing 80 n n O7 C21 B0T sing 81 n n O7 C11 B0T sing 82 n n C21 C20 B0T sing 83 n n C6 C11 B0T doub 84 n y C6 C5 B0T sing 85 n y C11 C12 B0T sing 86 n y C5 C10 B0T doub 87 n y C20 O6 B0T sing 88 n n C12 O6 B0T sing 89 n n C12 C8 B0T doub 90 n y C24 N2 B0T sing 91 n n C10 C8 B0T sing 92 n y C10 C23 B0T sing 93 n n C8 C14 B0T sing 94 n n N2 C23 B0T sing 95 n n N2 C22 B0T sing 96 n n C16 C17 B0T sing 97 n n C14 O4 B0T doub 98 n n C14 O1 B0T sing 99 n n C22 C9 B0T sing 100 n n O3 C13 B0T doub 101 n n C17 C18 B0T sing 102 n n C18 C19 B0T sing 103 n n C18 N1 B0T sing 104 n n C13 N1 B0T sing 105 n n C13 C7 B0T sing 106 n n C9 C7 B0T doub 107 n y C9 C4 B0T sing 108 n y C7 C3 B0T sing 109 n y C4 C2 B0T doub 110 n y C3 C1 B0T doub 111 n y C2 C1 B0T sing 112 n y C1 H1 B0T sing 113 n n C2 H2 B0T sing 114 n n C3 H3 B0T sing 115 n n C4 H4 B0T sing 116 n n C5 H5 B0T sing 117 n n C6 H6 B0T sing 118 n n C16 H7 B0T sing 119 n n C16 H8 B0T sing 120 n n C16 H9 B0T sing 121 n n C17 H10 B0T sing 122 n n C17 H11 B0T sing 123 n n C18 H12 B0T sing 124 n n C19 H13 B0T sing 125 n n C19 H14 B0T sing 126 n n C19 H15 B0T sing 127 n n C20 H16 B0T sing 128 n n C20 H17 B0T sing 129 n n C21 H18 B0T sing 130 n n C22 H19 B0T sing 131 n n C22 H20 B0T sing 132 n n C23 H21 B0T sing 133 n n C23 H22 B0T sing 134 n n C24 H23 B0T sing 135 n n C24 H24 B0T sing 136 n n C24 H25 B0T sing 137 n n C25 H26 B0T sing 138 n n C25 H27 B0T sing 139 n n C26 H28 B0T sing 140 n n C26 H29 B0T sing 141 n n N1 H30 B0T sing 142 n n O1 H32 B0T sing 143 n n O5 H33 B0T sing 144 n n # _atom_sites.entry_id 4CEE _atom_sites.fract_transf_matrix[1][1] 0.014079 _atom_sites.fract_transf_matrix[1][2] 0.008128 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016257 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015061 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 SO4 A 1 1210 1210 SO4 SO4 . D 2 SO4 A 1 1211 1211 SO4 SO4 . E 2 SO4 A 1 1212 1212 SO4 SO4 . F 2 SO4 A 1 1213 1213 SO4 SO4 . G 3 CL A 1 1214 1214 CL CL . H 4 B0T A 1 1215 1215 B0T B0T . I 2 SO4 B 1 1211 1211 SO4 SO4 . J 2 SO4 B 1 1212 1212 SO4 SO4 . K 2 SO4 B 1 1213 1213 SO4 SO4 . L 2 SO4 B 1 1214 1214 SO4 SO4 . M 5 ACT B 1 1215 1215 ACT ACT . N 3 CL B 1 1216 1216 CL CL . O 4 B0T B 1 1217 1217 B0T B0T . P 6 HOH A 1 2001 2001 HOH HOH . P 6 HOH A 2 2002 2002 HOH HOH . P 6 HOH A 3 2003 2003 HOH HOH . P 6 HOH A 4 2004 2004 HOH HOH . P 6 HOH A 5 2005 2005 HOH HOH . P 6 HOH A 6 2006 2006 HOH HOH . P 6 HOH A 7 2007 2007 HOH HOH . P 6 HOH A 8 2008 2008 HOH HOH . P 6 HOH A 9 2009 2009 HOH HOH . P 6 HOH A 10 2010 2010 HOH HOH . P 6 HOH A 11 2011 2011 HOH HOH . P 6 HOH A 12 2012 2012 HOH HOH . P 6 HOH A 13 2013 2013 HOH HOH . P 6 HOH A 14 2014 2014 HOH HOH . P 6 HOH A 15 2015 2015 HOH HOH . P 6 HOH A 16 2016 2016 HOH HOH . P 6 HOH A 17 2017 2017 HOH HOH . P 6 HOH A 18 2018 2018 HOH HOH . P 6 HOH A 19 2019 2019 HOH HOH . P 6 HOH A 20 2020 2020 HOH HOH . P 6 HOH A 21 2021 2021 HOH HOH . P 6 HOH A 22 2022 2022 HOH HOH . P 6 HOH A 23 2023 2023 HOH HOH . P 6 HOH A 24 2024 2024 HOH HOH . P 6 HOH A 25 2025 2025 HOH HOH . P 6 HOH A 26 2026 2026 HOH HOH . P 6 HOH A 27 2027 2027 HOH HOH . P 6 HOH A 28 2028 2028 HOH HOH . P 6 HOH A 29 2029 2029 HOH HOH . P 6 HOH A 30 2030 2030 HOH HOH . P 6 HOH A 31 2031 2031 HOH HOH . P 6 HOH A 32 2032 2032 HOH HOH . P 6 HOH A 33 2033 2033 HOH HOH . P 6 HOH A 34 2034 2034 HOH HOH . P 6 HOH A 35 2035 2035 HOH HOH . P 6 HOH A 36 2036 2036 HOH HOH . P 6 HOH A 37 2037 2037 HOH HOH . P 6 HOH A 38 2038 2038 HOH HOH . P 6 HOH A 39 2039 2039 HOH HOH . P 6 HOH A 40 2040 2040 HOH HOH . P 6 HOH A 41 2041 2041 HOH HOH . P 6 HOH A 42 2042 2042 HOH HOH . P 6 HOH A 43 2043 2043 HOH HOH . P 6 HOH A 44 2044 2044 HOH HOH . P 6 HOH A 45 2045 2045 HOH HOH . P 6 HOH A 46 2046 2046 HOH HOH . P 6 HOH A 47 2047 2047 HOH HOH . P 6 HOH A 48 2048 2048 HOH HOH . P 6 HOH A 49 2049 2049 HOH HOH . P 6 HOH A 50 2050 2050 HOH HOH . P 6 HOH A 51 2051 2051 HOH HOH . P 6 HOH A 52 2052 2052 HOH HOH . P 6 HOH A 53 2053 2053 HOH HOH . P 6 HOH A 54 2054 2054 HOH HOH . P 6 HOH A 55 2055 2055 HOH HOH . P 6 HOH A 56 2056 2056 HOH HOH . P 6 HOH A 57 2057 2057 HOH HOH . P 6 HOH A 58 2058 2058 HOH HOH . P 6 HOH A 59 2059 2059 HOH HOH . P 6 HOH A 60 2060 2060 HOH HOH . P 6 HOH A 61 2061 2061 HOH HOH . P 6 HOH A 62 2062 2062 HOH HOH . P 6 HOH A 63 2063 2063 HOH HOH . P 6 HOH A 64 2064 2064 HOH HOH . P 6 HOH A 65 2065 2065 HOH HOH . P 6 HOH A 66 2066 2066 HOH HOH . P 6 HOH A 67 2067 2067 HOH HOH . P 6 HOH A 68 2068 2068 HOH HOH . P 6 HOH A 69 2069 2069 HOH HOH . P 6 HOH A 70 2070 2070 HOH HOH . P 6 HOH A 71 2071 2071 HOH HOH . P 6 HOH A 72 2072 2072 HOH HOH . P 6 HOH A 73 2073 2073 HOH HOH . P 6 HOH A 74 2074 2074 HOH HOH . P 6 HOH A 75 2075 2075 HOH HOH . P 6 HOH A 76 2076 2076 HOH HOH . P 6 HOH A 77 2077 2077 HOH HOH . P 6 HOH A 78 2078 2078 HOH HOH . P 6 HOH A 79 2079 2079 HOH HOH . P 6 HOH A 80 2080 2080 HOH HOH . P 6 HOH A 81 2081 2081 HOH HOH . P 6 HOH A 82 2082 2082 HOH HOH . P 6 HOH A 83 2083 2083 HOH HOH . P 6 HOH A 84 2084 2084 HOH HOH . Q 6 HOH B 1 2001 2001 HOH HOH . Q 6 HOH B 2 2002 2002 HOH HOH . Q 6 HOH B 3 2003 2003 HOH HOH . Q 6 HOH B 4 2004 2004 HOH HOH . Q 6 HOH B 5 2005 2005 HOH HOH . Q 6 HOH B 6 2006 2006 HOH HOH . Q 6 HOH B 7 2007 2007 HOH HOH . Q 6 HOH B 8 2008 2008 HOH HOH . Q 6 HOH B 9 2009 2009 HOH HOH . Q 6 HOH B 10 2010 2010 HOH HOH . Q 6 HOH B 11 2011 2011 HOH HOH . Q 6 HOH B 12 2012 2012 HOH HOH . Q 6 HOH B 13 2013 2013 HOH HOH . Q 6 HOH B 14 2014 2014 HOH HOH . Q 6 HOH B 15 2015 2015 HOH HOH . Q 6 HOH B 16 2016 2016 HOH HOH . Q 6 HOH B 17 2017 2017 HOH HOH . Q 6 HOH B 18 2018 2018 HOH HOH . Q 6 HOH B 19 2019 2019 HOH HOH . Q 6 HOH B 20 2020 2020 HOH HOH . Q 6 HOH B 21 2021 2021 HOH HOH . Q 6 HOH B 22 2022 2022 HOH HOH . Q 6 HOH B 23 2023 2023 HOH HOH . Q 6 HOH B 24 2024 2024 HOH HOH . Q 6 HOH B 25 2025 2025 HOH HOH . Q 6 HOH B 26 2026 2026 HOH HOH . Q 6 HOH B 27 2027 2027 HOH HOH . Q 6 HOH B 28 2028 2028 HOH HOH . Q 6 HOH B 29 2029 2029 HOH HOH . Q 6 HOH B 30 2030 2030 HOH HOH . Q 6 HOH B 31 2031 2031 HOH HOH . Q 6 HOH B 32 2032 2032 HOH HOH . Q 6 HOH B 33 2033 2033 HOH HOH . Q 6 HOH B 34 2034 2034 HOH HOH . Q 6 HOH B 35 2035 2035 HOH HOH . Q 6 HOH B 36 2036 2036 HOH HOH . Q 6 HOH B 37 2037 2037 HOH HOH . Q 6 HOH B 38 2038 2038 HOH HOH . Q 6 HOH B 39 2039 2039 HOH HOH . Q 6 HOH B 40 2040 2040 HOH HOH . Q 6 HOH B 41 2041 2041 HOH HOH . Q 6 HOH B 42 2042 2042 HOH HOH . Q 6 HOH B 43 2043 2043 HOH HOH . Q 6 HOH B 44 2044 2044 HOH HOH . Q 6 HOH B 45 2045 2045 HOH HOH . Q 6 HOH B 46 2046 2046 HOH HOH . Q 6 HOH B 47 2047 2047 HOH HOH . Q 6 HOH B 48 2048 2048 HOH HOH . Q 6 HOH B 49 2049 2049 HOH HOH . Q 6 HOH B 50 2050 2050 HOH HOH . Q 6 HOH B 51 2051 2051 HOH HOH . Q 6 HOH B 52 2052 2052 HOH HOH . Q 6 HOH B 53 2053 2053 HOH HOH . Q 6 HOH B 54 2054 2054 HOH HOH . Q 6 HOH B 55 2055 2055 HOH HOH . Q 6 HOH B 56 2056 2056 HOH HOH . Q 6 HOH B 57 2057 2057 HOH HOH . Q 6 HOH B 58 2058 2058 HOH HOH . Q 6 HOH B 59 2059 2059 HOH HOH . Q 6 HOH B 60 2060 2060 HOH HOH . Q 6 HOH B 61 2061 2061 HOH HOH . Q 6 HOH B 62 2062 2062 HOH HOH . Q 6 HOH B 63 2063 2063 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 B0T . . . H 4 -10.584 35.773 6.548 1 28.71 ? C1 B0T 1215 A 1 HETATM 2 C C2 B0T . . . H 4 -11.781 35.486 5.928 1 28.68 ? C2 B0T 1215 A 1 HETATM 3 C C3 B0T . . . H 4 -9.491 36.159 5.799 1 28.14 ? C3 B0T 1215 A 1 HETATM 4 C C4 B0T . . . H 4 -11.885 35.579 4.556 1 28.02 ? C4 B0T 1215 A 1 HETATM 5 C C5 B0T . . . H 4 -9.092 32.905 -0.558 1 18.96 ? C5 B0T 1215 A 1 HETATM 6 C C6 B0T . . . H 4 -9.201 31.899 -1.494 1 18.61 ? C6 B0T 1215 A 1 HETATM 7 C C7 B0T . . . H 4 -9.597 36.24 4.428 1 28.78 ? C7 B0T 1215 A 1 HETATM 8 C C8 B0T . . . H 4 -10.488 31.665 0.955 1 18.82 ? C8 B0T 1215 A 1 HETATM 9 C C9 B0T . . . H 4 -10.795 35.954 3.793 1 26.98 ? C9 B0T 1215 A 1 HETATM 10 C C10 B0T . . . H 4 -9.735 32.797 0.665 1 19.78 ? C10 B0T 1215 A 1 HETATM 11 C C11 B0T . . . H 4 -9.958 30.785 -1.211 1 18.79 ? C11 B0T 1215 A 1 HETATM 12 C C12 B0T . . . H 4 -10.583 30.649 0.019 1 17.56 ? C12 B0T 1215 A 1 HETATM 13 C C13 B0T . . . H 4 -8.39 36.634 3.659 1 29.88 ? C13 B0T 1215 A 1 HETATM 14 C C14 B0T . . . H 4 -11.147 31.512 2.275 1 19.39 ? C14 B0T 1215 A 1 HETATM 15 C C15 B0T . . . H 4 -12.297 28.61 -4.78 1 26.27 ? C15 B0T 1215 A 1 HETATM 16 C C16 B0T . . . H 4 -5.977 33.826 2.019 1 29.77 ? C16 B0T 1215 A 1 HETATM 17 C C17 B0T . . . H 4 -5.218 34.811 2.884 1 27.37 ? C17 B0T 1215 A 1 HETATM 18 C C18 B0T . . . H 4 -6.023 36.07 3.13 1 29.25 ? C18 B0T 1215 A 1 HETATM 19 C C19 B0T . . . H 4 -5.12 37.043 3.856 1 28.72 ? C19 B0T 1215 A 1 HETATM 20 C C20 B0T . . . H 4 -11.077 28.416 -0.531 1 20.82 ? C20 B0T 1215 A 1 HETATM 21 C C21 B0T . . . H 4 -11.099 28.899 -1.959 1 21.21 ? C21 B0T 1215 A 1 HETATM 22 C C22 B0T . . . H 4 -10.963 36.031 2.306 1 27.37 ? C22 B0T 1215 A 1 HETATM 23 C C23 B0T . . . H 4 -9.619 33.942 1.635 1 20.75 ? C23 B0T 1215 A 1 HETATM 24 C C24 B0T . . . H 4 -11.537 34.914 0.224 1 25.73 ? C24 B0T 1215 A 1 HETATM 25 C C25 B0T . . . H 4 -10.908 28.151 -4.363 1 23.03 ? C25 B0T 1215 A 1 HETATM 26 C C26 B0T . . . H 4 -11.011 27.704 -2.913 1 22.11 ? C26 B0T 1215 A 1 HETATM 27 N N1 B0T . . . H 4 -7.26 35.859 3.883 1 28.95 ? N1 B0T 1215 A 1 HETATM 28 N N2 B0T . . . H 4 -10.927 34.725 1.578 1 26.09 ? N2 B0T 1215 A 1 HETATM 29 O O1 B0T . . . H 4 -10.979 30.37 2.848 1 18.5 ? O1 B0T 1215 A 1 HETATM 30 O O2 B0T . . . H 4 -12.346 29.654 -5.498 1 25.38 ? O2 B0T 1215 A 1 HETATM 31 O O3 B0T . . . H 4 -8.456 37.56 2.87 1 31.99 ? O3 B0T 1215 A 1 HETATM 32 O O4 B0T . . . H 4 -11.712 32.505 2.807 1 18.39 ? O4 B0T 1215 A 1 HETATM 33 O O5 B0T . . . H 4 -13.259 27.899 -4.385 1 29.95 ? O5 B0T 1215 A 1 HETATM 34 O O6 B0T . . . H 4 -11.363 29.538 0.32 1 18.79 ? O6 B0T 1215 A 1 HETATM 35 O O7 B0T . . . H 4 -10.028 29.817 -2.178 1 18.65 ? O7 B0T 1215 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 276 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 35 #