data_4CEO # _model_server_result.job_id 289HmWsHlFXP-cx-EdbrjA _model_server_result.datetime_utc '2024-11-22 04:06:35' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4ceo # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":1215}' # _entry.id 4CEO # _exptl.entry_id 4CEO _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 548.584 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(2S)-2-(3-hydroxy-3-oxopropyl)-6-[[[2-[(4-methoxyphenyl)methylcarbamoyl]phenyl]methyl-methyl-amino]methyl]-2,3-dihydro-1,4-benzodioxine-5-carboxylic acid' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4CEO _cell.length_a 70.354 _cell.length_b 70.354 _cell.length_c 66.632 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4CEO _symmetry.cell_setting ? _symmetry.Int_Tables_number 144 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 31' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 H N N ? 5 M N N # _chem_comp.formula 'C30 H32 N2 O8' _chem_comp.formula_weight 548.584 _chem_comp.id G0T _chem_comp.mon_nstd_flag . _chem_comp.name '(2S)-2-(3-hydroxy-3-oxopropyl)-6-[[[2-[(4-methoxyphenyl)methylcarbamoyl]phenyl]methyl-methyl-amino]methyl]-2,3-dihydro-1,4-benzodioxine-5-carboxylic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C3 G0T doub 89 n y C1 C2 G0T sing 90 n y C3 C11 G0T sing 91 n y C2 C4 G0T doub 92 n y C11 C19 G0T sing 93 n n C11 C14 G0T doub 94 n y C4 C14 G0T sing 95 n y N1 C19 G0T sing 96 n n N1 C25 G0T sing 97 n n C19 O3 G0T doub 98 n n C14 C26 G0T sing 99 n n C25 C13 G0T sing 100 n n O4 C20 G0T doub 101 n n C7 C13 G0T doub 102 n y C7 C10 G0T sing 103 n y O1 C20 G0T sing 104 n n C13 C6 G0T sing 105 n y C26 N2 G0T sing 106 n n C20 C12 G0T sing 107 n n N2 C27 G0T sing 108 n n N2 C28 G0T sing 109 n n C27 C15 G0T sing 110 n n C10 C18 G0T doub 111 n y C6 C9 G0T doub 112 n y C12 C15 G0T doub 113 n y C12 C17 G0T sing 114 n y C15 C5 G0T sing 115 n y C18 C9 G0T sing 116 n y C18 O8 G0T sing 117 n n O6 C17 G0T sing 118 n n O6 C22 G0T sing 119 n n C17 C16 G0T doub 120 n y C5 C8 G0T doub 121 n y C24 O8 G0T sing 122 n n C22 C23 G0T sing 123 n n C16 C8 G0T sing 124 n y C16 O7 G0T sing 125 n n C23 O7 G0T sing 126 n n C23 C30 G0T sing 127 n n C30 C29 G0T sing 128 n n O5 C21 G0T doub 129 n n C29 C21 G0T sing 130 n n C21 O2 G0T sing 131 n n C1 H1 G0T sing 132 n n C2 H2 G0T sing 133 n n C3 H3 G0T sing 134 n n C4 H4 G0T sing 135 n n C5 H5 G0T sing 136 n n C6 H6 G0T sing 137 n n C7 H7 G0T sing 138 n n C8 H8 G0T sing 139 n n C9 H9 G0T sing 140 n n C10 H10 G0T sing 141 n n C22 H11 G0T sing 142 n n C22 H12 G0T sing 143 n n C23 H13 G0T sing 144 n n C24 H14 G0T sing 145 n n C24 H15 G0T sing 146 n n C24 H16 G0T sing 147 n n C25 H17 G0T sing 148 n n C25 H18 G0T sing 149 n n C26 H19 G0T sing 150 n n C26 H20 G0T sing 151 n n C27 H21 G0T sing 152 n n C27 H22 G0T sing 153 n n C28 H23 G0T sing 154 n n C28 H24 G0T sing 155 n n C28 H25 G0T sing 156 n n C29 H26 G0T sing 157 n n C29 H27 G0T sing 158 n n C30 H28 G0T sing 159 n n C30 H29 G0T sing 160 n n N1 H30 G0T sing 161 n n O1 H32 G0T sing 162 n n O2 H33 G0T sing 163 n n # _atom_sites.entry_id 4CEO _atom_sites.fract_transf_matrix[1][1] 0.014214 _atom_sites.fract_transf_matrix[1][2] 0.008206 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016413 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015008 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 SO4 A 1 1210 1210 SO4 SO4 . D 2 SO4 A 1 1211 1211 SO4 SO4 . E 2 SO4 A 1 1212 1212 SO4 SO4 . F 3 CL A 1 1213 1213 CL CL . G 4 ACT A 1 1214 1214 ACT ACT . H 5 G0T A 1 1215 1215 G0T G0T . I 2 SO4 B 1 1210 1210 SO4 SO4 . J 2 SO4 B 1 1211 1211 SO4 SO4 . K 2 SO4 B 1 1212 1212 SO4 SO4 . L 4 ACT B 1 1213 1213 ACT ACT . M 5 G0T B 1 1214 1214 G0T G0T . N 6 HOH A 1 2001 2001 HOH HOH . N 6 HOH A 2 2002 2002 HOH HOH . N 6 HOH A 3 2003 2003 HOH HOH . N 6 HOH A 4 2004 2004 HOH HOH . N 6 HOH A 5 2005 2005 HOH HOH . N 6 HOH A 6 2006 2006 HOH HOH . N 6 HOH A 7 2007 2007 HOH HOH . N 6 HOH A 8 2008 2008 HOH HOH . N 6 HOH A 9 2009 2009 HOH HOH . N 6 HOH A 10 2010 2010 HOH HOH . N 6 HOH A 11 2011 2011 HOH HOH . N 6 HOH A 12 2012 2012 HOH HOH . N 6 HOH A 13 2013 2013 HOH HOH . N 6 HOH A 14 2014 2014 HOH HOH . N 6 HOH A 15 2015 2015 HOH HOH . N 6 HOH A 16 2016 2016 HOH HOH . N 6 HOH A 17 2017 2017 HOH HOH . N 6 HOH A 18 2018 2018 HOH HOH . N 6 HOH A 19 2019 2019 HOH HOH . N 6 HOH A 20 2020 2020 HOH HOH . N 6 HOH A 21 2021 2021 HOH HOH . N 6 HOH A 22 2022 2022 HOH HOH . N 6 HOH A 23 2023 2023 HOH HOH . N 6 HOH A 24 2024 2024 HOH HOH . N 6 HOH A 25 2025 2025 HOH HOH . N 6 HOH A 26 2026 2026 HOH HOH . N 6 HOH A 27 2027 2027 HOH HOH . N 6 HOH A 28 2028 2028 HOH HOH . N 6 HOH A 29 2029 2029 HOH HOH . N 6 HOH A 30 2030 2030 HOH HOH . N 6 HOH A 31 2031 2031 HOH HOH . N 6 HOH A 32 2032 2032 HOH HOH . N 6 HOH A 33 2033 2033 HOH HOH . N 6 HOH A 34 2034 2034 HOH HOH . N 6 HOH A 35 2035 2035 HOH HOH . N 6 HOH A 36 2036 2036 HOH HOH . N 6 HOH A 37 2037 2037 HOH HOH . N 6 HOH A 38 2038 2038 HOH HOH . N 6 HOH A 39 2039 2039 HOH HOH . N 6 HOH A 40 2040 2040 HOH HOH . N 6 HOH A 41 2041 2041 HOH HOH . N 6 HOH A 42 2042 2042 HOH HOH . N 6 HOH A 43 2043 2043 HOH HOH . N 6 HOH A 44 2044 2044 HOH HOH . N 6 HOH A 45 2045 2045 HOH HOH . N 6 HOH A 46 2046 2046 HOH HOH . N 6 HOH A 47 2047 2047 HOH HOH . N 6 HOH A 48 2048 2048 HOH HOH . N 6 HOH A 49 2049 2049 HOH HOH . N 6 HOH A 50 2050 2050 HOH HOH . N 6 HOH A 51 2051 2051 HOH HOH . N 6 HOH A 52 2052 2052 HOH HOH . N 6 HOH A 53 2053 2053 HOH HOH . N 6 HOH A 54 2054 2054 HOH HOH . N 6 HOH A 55 2055 2055 HOH HOH . N 6 HOH A 56 2056 2056 HOH HOH . N 6 HOH A 57 2057 2057 HOH HOH . N 6 HOH A 58 2058 2058 HOH HOH . N 6 HOH A 59 2059 2059 HOH HOH . N 6 HOH A 60 2060 2060 HOH HOH . N 6 HOH A 61 2061 2061 HOH HOH . N 6 HOH A 62 2062 2062 HOH HOH . N 6 HOH A 63 2063 2063 HOH HOH . N 6 HOH A 64 2064 2064 HOH HOH . N 6 HOH A 65 2065 2065 HOH HOH . N 6 HOH A 66 2066 2066 HOH HOH . N 6 HOH A 67 2067 2067 HOH HOH . N 6 HOH A 68 2068 2068 HOH HOH . N 6 HOH A 69 2069 2069 HOH HOH . N 6 HOH A 70 2070 2070 HOH HOH . O 6 HOH B 1 2001 2001 HOH HOH . O 6 HOH B 2 2002 2002 HOH HOH . O 6 HOH B 3 2003 2003 HOH HOH . O 6 HOH B 4 2004 2004 HOH HOH . O 6 HOH B 5 2005 2005 HOH HOH . O 6 HOH B 6 2006 2006 HOH HOH . O 6 HOH B 7 2007 2007 HOH HOH . O 6 HOH B 8 2008 2008 HOH HOH . O 6 HOH B 9 2009 2009 HOH HOH . O 6 HOH B 10 2010 2010 HOH HOH . O 6 HOH B 11 2011 2011 HOH HOH . O 6 HOH B 12 2012 2012 HOH HOH . O 6 HOH B 13 2013 2013 HOH HOH . O 6 HOH B 14 2014 2014 HOH HOH . O 6 HOH B 15 2015 2015 HOH HOH . O 6 HOH B 16 2016 2016 HOH HOH . O 6 HOH B 17 2017 2017 HOH HOH . O 6 HOH B 18 2018 2018 HOH HOH . O 6 HOH B 19 2019 2019 HOH HOH . O 6 HOH B 20 2020 2020 HOH HOH . O 6 HOH B 21 2021 2021 HOH HOH . O 6 HOH B 22 2022 2022 HOH HOH . O 6 HOH B 23 2023 2023 HOH HOH . O 6 HOH B 24 2024 2024 HOH HOH . O 6 HOH B 25 2025 2025 HOH HOH . O 6 HOH B 26 2026 2026 HOH HOH . O 6 HOH B 27 2027 2027 HOH HOH . O 6 HOH B 28 2028 2028 HOH HOH . O 6 HOH B 29 2029 2029 HOH HOH . O 6 HOH B 30 2030 2030 HOH HOH . O 6 HOH B 31 2031 2031 HOH HOH . O 6 HOH B 32 2032 2032 HOH HOH . O 6 HOH B 33 2033 2033 HOH HOH . O 6 HOH B 34 2034 2034 HOH HOH . O 6 HOH B 35 2035 2035 HOH HOH . O 6 HOH B 36 2036 2036 HOH HOH . O 6 HOH B 37 2037 2037 HOH HOH . O 6 HOH B 38 2038 2038 HOH HOH . O 6 HOH B 39 2039 2039 HOH HOH . O 6 HOH B 40 2040 2040 HOH HOH . O 6 HOH B 41 2041 2041 HOH HOH . O 6 HOH B 42 2042 2042 HOH HOH . O 6 HOH B 43 2043 2043 HOH HOH . O 6 HOH B 44 2044 2044 HOH HOH . O 6 HOH B 45 2045 2045 HOH HOH . O 6 HOH B 46 2046 2046 HOH HOH . O 6 HOH B 47 2047 2047 HOH HOH . O 6 HOH B 48 2048 2048 HOH HOH . O 6 HOH B 49 2049 2049 HOH HOH . O 6 HOH B 50 2050 2050 HOH HOH . O 6 HOH B 51 2051 2051 HOH HOH . O 6 HOH B 52 2052 2052 HOH HOH . O 6 HOH B 53 2053 2053 HOH HOH . O 6 HOH B 54 2054 2054 HOH HOH . O 6 HOH B 55 2055 2055 HOH HOH . O 6 HOH B 56 2056 2056 HOH HOH . O 6 HOH B 57 2057 2057 HOH HOH . O 6 HOH B 58 2058 2058 HOH HOH . O 6 HOH B 59 2059 2059 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 G0T . . . H 5 11.574 34.955 -5.442 1 32.44 ? C1 G0T 1215 A 1 HETATM 2 C C2 G0T . . . H 5 12.669 34.59 -4.695 1 32.11 ? C2 G0T 1215 A 1 HETATM 3 C C3 G0T . . . H 5 10.49 35.557 -4.83 1 32.58 ? C3 G0T 1215 A 1 HETATM 4 C C4 G0T . . . H 5 12.67 34.824 -3.335 1 31.03 ? C4 G0T 1215 A 1 HETATM 5 C C5 G0T . . . H 5 9.481 32.903 1.832 1 25.7 ? C5 G0T 1215 A 1 HETATM 6 C C6 G0T . . . H 5 6.902 36.158 -0.046 1 29.91 ? C6 G0T 1215 A 1 HETATM 7 C C7 G0T . . . H 5 6.102 34.351 -1.377 1 33.77 ? C7 G0T 1215 A 1 HETATM 8 C C8 G0T . . . H 5 9.475 31.94 2.828 1 23.09 ? C8 G0T 1215 A 1 HETATM 9 C C9 G0T . . . H 5 6.658 35.417 1.091 1 28.19 ? C9 G0T 1215 A 1 HETATM 10 C C10 G0T . . . H 5 5.858 33.593 -0.244 1 33.72 ? C10 G0T 1215 A 1 HETATM 11 C C11 G0T . . . H 5 10.499 35.789 -3.466 1 31.4 ? C11 G0T 1215 A 1 HETATM 12 C C12 G0T . . . H 5 10.765 31.464 0.402 1 21.67 ? C12 G0T 1215 A 1 HETATM 13 C C13 G0T . . . H 5 6.624 35.631 -1.289 1 32.49 ? C13 G0T 1215 A 1 HETATM 14 C C14 G0T . . . H 5 11.598 35.422 -2.721 1 30.55 ? C14 G0T 1215 A 1 HETATM 15 C C15 G0T . . . H 5 10.121 32.684 0.617 1 24.4 ? C15 G0T 1215 A 1 HETATM 16 C C16 G0T . . . H 5 10.127 30.748 2.621 1 22.06 ? C16 G0T 1215 A 1 HETATM 17 C C17 G0T . . . H 5 10.751 30.507 1.408 1 20.1 ? C17 G0T 1215 A 1 HETATM 18 C C18 G0T . . . H 5 6.142 34.142 0.994 1 29.5 ? C18 G0T 1215 A 1 HETATM 19 C C19 G0T . . . H 5 9.337 36.433 -2.826 1 31.55 ? C19 G0T 1215 A 1 HETATM 20 C C20 G0T . . . H 5 11.449 31.147 -0.892 1 22.35 ? C20 G0T 1215 A 1 HETATM 21 C C21 G0T . . . H 5 12.338 28.616 6.306 1 32.6 ? C21 G0T 1215 A 1 HETATM 22 C C22 G0T . . . H 5 11.215 28.311 2.157 1 24.46 ? C22 G0T 1215 A 1 HETATM 23 C C23 G0T . . . H 5 11.189 28.906 3.533 1 24.14 ? C23 G0T 1215 A 1 HETATM 24 C C24 G0T . . . H 5 5.545 32.105 1.988 1 27.39 ? C24 G0T 1215 A 1 HETATM 25 C C25 G0T . . . H 5 6.895 36.429 -2.54 1 31.36 ? C25 G0T 1215 A 1 HETATM 26 C C26 G0T . . . H 5 11.665 35.645 -1.259 1 31.75 ? C26 G0T 1215 A 1 HETATM 27 C C27 G0T . . . H 5 10.088 33.802 -0.394 1 24.58 ? C27 G0T 1215 A 1 HETATM 28 C C28 G0T . . . H 5 12.19 34.623 0.849 1 30.24 ? C28 G0T 1215 A 1 HETATM 29 C C29 G0T . . . H 5 10.904 28.279 5.937 1 29.11 ? C29 G0T 1215 A 1 HETATM 30 C C30 G0T . . . H 5 10.992 27.756 4.514 1 28.74 ? C30 G0T 1215 A 1 HETATM 31 N N1 G0T . . . H 5 8.104 35.932 -3.166 1 31.78 ? N1 G0T 1215 A 1 HETATM 32 N N2 G0T . . . H 5 11.483 34.398 -0.455 1 29.89 ? N2 G0T 1215 A 1 HETATM 33 O O1 G0T . . . H 5 11.225 29.999 -1.376 1 19.87 ? O1 G0T 1215 A 1 HETATM 34 O O2 G0T . . . H 5 12.494 29.651 7.003 1 33.97 ? O2 G0T 1215 A 1 HETATM 35 O O3 G0T . . . H 5 9.502 37.354 -2.04 1 33.12 ? O3 G0T 1215 A 1 HETATM 36 O O4 G0T . . . H 5 12.115 32.036 -1.483 1 22.71 ? O4 G0T 1215 A 1 HETATM 37 O O5 G0T . . . H 5 13.225 27.817 5.909 1 35.71 ? O5 G0T 1215 A 1 HETATM 38 O O6 G0T . . . H 5 11.44 29.328 1.165 1 22.74 ? O6 G0T 1215 A 1 HETATM 39 O O7 G0T . . . H 5 10.106 29.832 3.658 1 21.46 ? O7 G0T 1215 A 1 HETATM 40 O O8 G0T . . . H 5 5.938 33.463 2.186 1 30.27 ? O8 G0T 1215 A 1 # _model_server_stats.io_time_ms 58 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 28 _model_server_stats.query_time_ms 309 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 40 #