data_4CES # _model_server_result.job_id uLjDSnaRQaa9X6nZ-zGR3w _model_server_result.datetime_utc '2024-11-25 06:03:14' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4ces # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":1215}' # _entry.id 4CES # _exptl.entry_id 4CES _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 508.52 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(2S)-6-[[[2-(furan-2-ylmethylcarbamoyl)phenyl]methyl-methyl-amino]methyl]-2-(3-hydroxy-3-oxopropyl)-2,3-dihydro-1,4-benzodioxine-5-carboxylic acid' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4CES _cell.length_a 71.104 _cell.length_b 71.104 _cell.length_c 66.665 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4CES _symmetry.cell_setting ? _symmetry.Int_Tables_number 144 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 31' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 H N N ? 4 M N N # _chem_comp.formula 'C27 H28 N2 O8' _chem_comp.formula_weight 508.52 _chem_comp.id NFW _chem_comp.mon_nstd_flag . _chem_comp.name '(2S)-6-[[[2-(furan-2-ylmethylcarbamoyl)phenyl]methyl-methyl-amino]methyl]-2-(3-hydroxy-3-oxopropyl)-2,3-dihydro-1,4-benzodioxine-5-carboxylic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 NFW sing 237 n y C1 C4 NFW doub 238 n y C2 C5 NFW doub 239 n y C3 C8 NFW sing 240 n y C3 C9 NFW doub 241 n y C4 C10 NFW sing 242 n y C5 C12 NFW sing 243 n y C6 C7 NFW sing 244 n y C6 C13 NFW doub 245 n y C7 C14 NFW doub 246 n y C8 C16 NFW doub 247 n y C9 O37 NFW sing 248 n y C10 C12 NFW doub 249 n y C10 C19 NFW sing 250 n n C11 C13 NFW sing 251 n y C11 C15 NFW doub 252 n y C11 C20 NFW sing 253 n n C12 C24 NFW sing 254 n n C13 C25 NFW sing 255 n n C14 C15 NFW sing 256 n y C14 O39 NFW sing 257 n n C15 O38 NFW sing 258 n n C16 C26 NFW sing 259 n n C16 O37 NFW sing 260 n y C19 N30 NFW sing 261 n n C19 O34 NFW doub 262 n n C20 O32 NFW doub 263 n n C20 O35 NFW sing 264 n n C21 C28 NFW sing 265 n n C21 O33 NFW sing 266 n n C21 O36 NFW doub 267 n n C23 C22 NFW sing 268 n n C23 C29 NFW sing 269 n n C23 O39 NFW sing 270 n n C22 O38 NFW sing 271 n n C24 N31 NFW sing 272 n n C25 N31 NFW sing 273 n n C26 N30 NFW sing 274 n n C27 N31 NFW sing 275 n n C28 C29 NFW sing 276 n n C1 H1 NFW sing 277 n n C2 H2 NFW sing 278 n n C4 H4 NFW sing 279 n n C5 H5 NFW sing 280 n n C3 H3 NFW sing 281 n n C8 H8 NFW sing 282 n n C9 H9 NFW sing 283 n n C6 H6 NFW sing 284 n n C7 H7 NFW sing 285 n n C24 H241 NFW sing 286 n n C24 H242 NFW sing 287 n n C25 H251 NFW sing 288 n n C25 H252 NFW sing 289 n n C26 H261 NFW sing 290 n n C26 H262 NFW sing 291 n n N30 H30 NFW sing 292 n n O35 H35 NFW sing 293 n n C28 H281 NFW sing 294 n n C28 H282 NFW sing 295 n n O33 H33 NFW sing 296 n n C23 H23 NFW sing 297 n n C22 H221 NFW sing 298 n n C22 H222 NFW sing 299 n n C29 H291 NFW sing 300 n n C29 H292 NFW sing 301 n n C27 H271 NFW sing 302 n n C27 H272 NFW sing 303 n n C27 H273 NFW sing 304 n n # _atom_sites.entry_id 4CES _atom_sites.fract_transf_matrix[1][1] 0.014064 _atom_sites.fract_transf_matrix[1][2] 0.00812 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01624 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 SO4 A 1 1210 1210 SO4 SO4 . D 2 SO4 A 1 1211 1211 SO4 SO4 . E 2 SO4 A 1 1212 1212 SO4 SO4 . F 2 SO4 A 1 1213 1213 SO4 SO4 . G 3 CL A 1 1214 1214 CL CL . H 4 NFW A 1 1215 1215 NFW NFW . I 2 SO4 B 1 1210 1210 SO4 SO4 . J 2 SO4 B 1 1211 1211 SO4 SO4 . K 2 SO4 B 1 1212 1212 SO4 SO4 . L 2 SO4 B 1 1213 1213 SO4 SO4 . M 4 NFW B 1 1214 1214 NFW NFW . N 3 CL B 1 1215 1215 CL CL . O 5 HOH A 1 2001 2001 HOH HOH . O 5 HOH A 2 2002 2002 HOH HOH . O 5 HOH A 3 2003 2003 HOH HOH . O 5 HOH A 4 2004 2004 HOH HOH . O 5 HOH A 5 2005 2005 HOH HOH . O 5 HOH A 6 2006 2006 HOH HOH . O 5 HOH A 7 2007 2007 HOH HOH . O 5 HOH A 8 2008 2008 HOH HOH . O 5 HOH A 9 2009 2009 HOH HOH . O 5 HOH A 10 2010 2010 HOH HOH . O 5 HOH A 11 2011 2011 HOH HOH . O 5 HOH A 12 2012 2012 HOH HOH . O 5 HOH A 13 2013 2013 HOH HOH . O 5 HOH A 14 2014 2014 HOH HOH . O 5 HOH A 15 2015 2015 HOH HOH . O 5 HOH A 16 2016 2016 HOH HOH . O 5 HOH A 17 2017 2017 HOH HOH . O 5 HOH A 18 2018 2018 HOH HOH . O 5 HOH A 19 2019 2019 HOH HOH . O 5 HOH A 20 2020 2020 HOH HOH . O 5 HOH A 21 2021 2021 HOH HOH . O 5 HOH A 22 2022 2022 HOH HOH . O 5 HOH A 23 2023 2023 HOH HOH . O 5 HOH A 24 2024 2024 HOH HOH . O 5 HOH A 25 2025 2025 HOH HOH . O 5 HOH A 26 2026 2026 HOH HOH . O 5 HOH A 27 2027 2027 HOH HOH . O 5 HOH A 28 2028 2028 HOH HOH . O 5 HOH A 29 2029 2029 HOH HOH . O 5 HOH A 30 2030 2030 HOH HOH . O 5 HOH A 31 2031 2031 HOH HOH . O 5 HOH A 32 2032 2032 HOH HOH . O 5 HOH A 33 2033 2033 HOH HOH . O 5 HOH A 34 2034 2034 HOH HOH . O 5 HOH A 35 2035 2035 HOH HOH . O 5 HOH A 36 2036 2036 HOH HOH . O 5 HOH A 37 2037 2037 HOH HOH . O 5 HOH A 38 2038 2038 HOH HOH . O 5 HOH A 39 2039 2039 HOH HOH . O 5 HOH A 40 2040 2040 HOH HOH . O 5 HOH A 41 2041 2041 HOH HOH . O 5 HOH A 42 2042 2042 HOH HOH . O 5 HOH A 43 2043 2043 HOH HOH . O 5 HOH A 44 2044 2044 HOH HOH . O 5 HOH A 45 2045 2045 HOH HOH . O 5 HOH A 46 2046 2046 HOH HOH . O 5 HOH A 47 2047 2047 HOH HOH . O 5 HOH A 48 2048 2048 HOH HOH . O 5 HOH A 49 2049 2049 HOH HOH . O 5 HOH A 50 2050 2050 HOH HOH . O 5 HOH A 51 2051 2051 HOH HOH . O 5 HOH A 52 2052 2052 HOH HOH . O 5 HOH A 53 2053 2053 HOH HOH . O 5 HOH A 54 2054 2054 HOH HOH . O 5 HOH A 55 2055 2055 HOH HOH . O 5 HOH A 56 2056 2056 HOH HOH . O 5 HOH A 57 2057 2057 HOH HOH . O 5 HOH A 58 2058 2058 HOH HOH . O 5 HOH A 59 2059 2059 HOH HOH . O 5 HOH A 60 2060 2060 HOH HOH . O 5 HOH A 61 2061 2061 HOH HOH . O 5 HOH A 62 2062 2062 HOH HOH . O 5 HOH A 63 2063 2063 HOH HOH . O 5 HOH A 64 2064 2064 HOH HOH . O 5 HOH A 65 2065 2065 HOH HOH . O 5 HOH A 66 2066 2066 HOH HOH . O 5 HOH A 67 2067 2067 HOH HOH . O 5 HOH A 68 2068 2068 HOH HOH . O 5 HOH A 69 2069 2069 HOH HOH . O 5 HOH A 70 2070 2070 HOH HOH . O 5 HOH A 71 2071 2071 HOH HOH . O 5 HOH A 72 2072 2072 HOH HOH . O 5 HOH A 73 2073 2073 HOH HOH . O 5 HOH A 74 2074 2074 HOH HOH . O 5 HOH A 75 2075 2075 HOH HOH . O 5 HOH A 76 2076 2076 HOH HOH . O 5 HOH A 77 2077 2077 HOH HOH . O 5 HOH A 78 2078 2078 HOH HOH . O 5 HOH A 79 2079 2079 HOH HOH . O 5 HOH A 80 2080 2080 HOH HOH . O 5 HOH A 81 2081 2081 HOH HOH . P 5 HOH B 1 2001 2001 HOH HOH . P 5 HOH B 2 2002 2002 HOH HOH . P 5 HOH B 3 2003 2003 HOH HOH . P 5 HOH B 4 2004 2004 HOH HOH . P 5 HOH B 5 2005 2005 HOH HOH . P 5 HOH B 6 2006 2006 HOH HOH . P 5 HOH B 7 2007 2007 HOH HOH . P 5 HOH B 8 2008 2008 HOH HOH . P 5 HOH B 9 2009 2009 HOH HOH . P 5 HOH B 10 2010 2010 HOH HOH . P 5 HOH B 11 2011 2011 HOH HOH . P 5 HOH B 12 2012 2012 HOH HOH . P 5 HOH B 13 2013 2013 HOH HOH . P 5 HOH B 14 2014 2014 HOH HOH . P 5 HOH B 15 2015 2015 HOH HOH . P 5 HOH B 16 2016 2016 HOH HOH . P 5 HOH B 17 2017 2017 HOH HOH . P 5 HOH B 18 2018 2018 HOH HOH . P 5 HOH B 19 2019 2019 HOH HOH . P 5 HOH B 20 2020 2020 HOH HOH . P 5 HOH B 21 2021 2021 HOH HOH . P 5 HOH B 22 2022 2022 HOH HOH . P 5 HOH B 23 2023 2023 HOH HOH . P 5 HOH B 24 2024 2024 HOH HOH . P 5 HOH B 25 2025 2025 HOH HOH . P 5 HOH B 26 2026 2026 HOH HOH . P 5 HOH B 27 2027 2027 HOH HOH . P 5 HOH B 28 2028 2028 HOH HOH . P 5 HOH B 29 2029 2029 HOH HOH . P 5 HOH B 30 2030 2030 HOH HOH . P 5 HOH B 31 2031 2031 HOH HOH . P 5 HOH B 32 2032 2032 HOH HOH . P 5 HOH B 33 2033 2033 HOH HOH . P 5 HOH B 34 2034 2034 HOH HOH . P 5 HOH B 35 2035 2035 HOH HOH . P 5 HOH B 36 2036 2036 HOH HOH . P 5 HOH B 37 2037 2037 HOH HOH . P 5 HOH B 38 2038 2038 HOH HOH . P 5 HOH B 39 2039 2039 HOH HOH . P 5 HOH B 40 2040 2040 HOH HOH . P 5 HOH B 41 2041 2041 HOH HOH . P 5 HOH B 42 2042 2042 HOH HOH . P 5 HOH B 43 2043 2043 HOH HOH . P 5 HOH B 44 2044 2044 HOH HOH . P 5 HOH B 45 2045 2045 HOH HOH . P 5 HOH B 46 2046 2046 HOH HOH . P 5 HOH B 47 2047 2047 HOH HOH . P 5 HOH B 48 2048 2048 HOH HOH . P 5 HOH B 49 2049 2049 HOH HOH . P 5 HOH B 50 2050 2050 HOH HOH . P 5 HOH B 51 2051 2051 HOH HOH . P 5 HOH B 52 2052 2052 HOH HOH . P 5 HOH B 53 2053 2053 HOH HOH . P 5 HOH B 54 2054 2054 HOH HOH . P 5 HOH B 55 2055 2055 HOH HOH . P 5 HOH B 56 2056 2056 HOH HOH . P 5 HOH B 57 2057 2057 HOH HOH . P 5 HOH B 58 2058 2058 HOH HOH . P 5 HOH B 59 2059 2059 HOH HOH . P 5 HOH B 60 2060 2060 HOH HOH . P 5 HOH B 61 2061 2061 HOH HOH . P 5 HOH B 62 2062 2062 HOH HOH . P 5 HOH B 63 2063 2063 HOH HOH . P 5 HOH B 64 2064 2064 HOH HOH . P 5 HOH B 65 2065 2065 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 NFW . . . H 4 10.859 35.629 -5.132 1 33.14 ? C1 NFW 1215 A 1 HETATM 2 C C2 NFW . . . H 4 11.997 35.328 -4.417 1 33.88 ? C2 NFW 1215 A 1 HETATM 3 C C3 NFW . . . H 4 5.828 35.048 1.249 1 35.42 ? C3 NFW 1215 A 1 HETATM 4 C C4 NFW . . . H 4 9.719 36.081 -4.492 1 34.12 ? C4 NFW 1215 A 1 HETATM 5 C C5 NFW . . . H 4 11.981 35.478 -3.045 1 33.57 ? C5 NFW 1215 A 1 HETATM 6 C C6 NFW . . . H 4 9.058 33.038 2.071 1 22.06 ? C6 NFW 1215 A 1 HETATM 7 C C7 NFW . . . H 4 9.163 32.06 3.038 1 22.09 ? C7 NFW 1215 A 1 HETATM 8 C C8 NFW . . . H 4 6.407 35.934 0.302 1 33.03 ? C8 NFW 1215 A 1 HETATM 9 C C9 NFW . . . H 4 4.92 34.272 0.554 1 34.9 ? C9 NFW 1215 A 1 HETATM 10 C C10 NFW . . . H 4 9.701 36.221 -3.119 1 33.61 ? C10 NFW 1215 A 1 HETATM 11 C C11 NFW . . . H 4 10.455 31.747 0.575 1 21.39 ? C11 NFW 1215 A 1 HETATM 12 C C12 NFW . . . H 4 10.84 35.919 -2.399 1 32.65 ? C12 NFW 1215 A 1 HETATM 13 C C13 NFW . . . H 4 9.701 32.886 0.849 1 23.8 ? C13 NFW 1215 A 1 HETATM 14 C C14 NFW . . . H 4 9.918 30.939 2.778 1 21.16 ? C14 NFW 1215 A 1 HETATM 15 C C15 NFW . . . H 4 10.552 30.769 1.553 1 20.89 ? C15 NFW 1215 A 1 HETATM 16 C C16 NFW . . . H 4 5.803 35.642 -0.897 1 34.92 ? C16 NFW 1215 A 1 HETATM 17 C C19 NFW . . . H 4 8.463 36.69 -2.427 1 34.26 ? C19 NFW 1215 A 1 HETATM 18 C C20 NFW . . . H 4 11.123 31.565 -0.751 1 22.8 ? C20 NFW 1215 A 1 HETATM 19 C C21 NFW . . . H 4 12.312 28.782 6.379 1 32.14 ? C21 NFW 1215 A 1 HETATM 20 C C22 NFW . . . H 4 11.064 28.565 2.2 1 23.91 ? C22 NFW 1215 A 1 HETATM 21 C C23 NFW . . . H 4 11.065 29.084 3.607 1 24.35 ? C23 NFW 1215 A 1 HETATM 22 C C24 NFW . . . H 4 10.852 36.063 -0.917 1 32.69 ? C24 NFW 1215 A 1 HETATM 23 C C25 NFW . . . H 4 9.575 33.991 -0.159 1 23.84 ? C25 NFW 1215 A 1 HETATM 24 C C26 NFW . . . H 4 6.007 36.228 -2.234 1 34.4 ? C26 NFW 1215 A 1 HETATM 25 C C27 NFW . . . H 4 11.493 35.088 1.166 1 29.33 ? C27 NFW 1215 A 1 HETATM 26 C C28 NFW . . . H 4 10.895 28.353 6.018 1 29.46 ? C28 NFW 1215 A 1 HETATM 27 C C29 NFW . . . H 4 10.918 27.911 4.57 1 26.46 ? C29 NFW 1215 A 1 HETATM 28 N N30 NFW . . . H 4 7.349 35.901 -2.665 1 33.36 ? N30 NFW 1215 A 1 HETATM 29 N N31 NFW . . . H 4 10.873 34.78 -0.163 1 28.98 ? N31 NFW 1215 A 1 HETATM 30 O O32 NFW . . . H 4 11.701 32.546 -1.301 1 22.16 ? O32 NFW 1215 A 1 HETATM 31 O O33 NFW . . . H 4 12.374 29.822 7.099 1 33.33 ? O33 NFW 1215 A 1 HETATM 32 O O34 NFW . . . H 4 8.485 37.677 -1.698 1 35 ? O34 NFW 1215 A 1 HETATM 33 O O35 NFW . . . H 4 11.002 30.418 -1.281 1 19.84 ? O35 NFW 1215 A 1 HETATM 34 O O36 NFW . . . H 4 13.264 28.066 5.964 1 36.17 ? O36 NFW 1215 A 1 HETATM 35 O O37 NFW . . . H 4 4.894 34.632 -0.759 1 33.55 ? O37 NFW 1215 A 1 HETATM 36 O O38 NFW . . . H 4 11.325 29.639 1.285 1 21.49 ? O38 NFW 1215 A 1 HETATM 37 O O39 NFW . . . H 4 9.978 29.998 3.777 1 22.72 ? O39 NFW 1215 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 19 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 269 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 37 #