data_4CFB # _model_server_result.job_id hMjoKLbWZzmkz7SvhyjJvg _model_server_result.datetime_utc '2024-11-22 05:20:24' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4cfb # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":1217}' # _entry.id 4CFB # _exptl.entry_id 4CFB _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 439.524 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (R)-(4-CARBOXY-1,3-BENZODIOXOL-5-YL)METHYL-[[2-(CYCLOHEXYLMETHYLCARBAMOYL)PHENYL]METHYL]-METHYL-AZANIUM _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4CFB _cell.length_a 71.16 _cell.length_b 71.16 _cell.length_c 67.023 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4CFB _symmetry.cell_setting ? _symmetry.Int_Tables_number 144 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 31' # _pdbx_struct_assembly.method_details PQS _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 J N N ? 4 O N N # _chem_comp.formula 'C25 H31 N2 O5 1' _chem_comp.formula_weight 439.524 _chem_comp.id OM3 _chem_comp.mon_nstd_flag . _chem_comp.name (R)-(4-CARBOXY-1,3-BENZODIOXOL-5-YL)METHYL-[[2-(CYCLOHEXYLMETHYLCARBAMOYL)PHENYL]METHYL]-METHYL-AZANIUM _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 OM3 sing 243 n y C1 C3 OM3 doub 244 n y C2 C4 OM3 doub 245 n y C3 C7 OM3 sing 246 n y C4 C9 OM3 sing 247 n y C5 C6 OM3 sing 248 n y C5 C10 OM3 doub 249 n y C6 C11 OM3 doub 250 n y C7 C9 OM3 doub 251 n y C7 C13 OM3 sing 252 n n C8 C10 OM3 sing 253 n y C8 C12 OM3 doub 254 n y C8 C14 OM3 sing 255 n n C9 C23 OM3 sing 256 n n C10 C24 OM3 sing 257 n n C11 C12 OM3 sing 258 n y C11 O31 OM3 sing 259 n n C12 O32 OM3 sing 260 n n C13 N26 OM3 sing 261 n n C13 O29 OM3 doub 262 n n C14 O28 OM3 sing 263 n n C14 O30 OM3 doub 264 n n C15 C16 OM3 sing 265 n n C15 C17 OM3 sing 266 n n C16 C18 OM3 sing 267 n n C17 C19 OM3 sing 268 n n C18 C21 OM3 sing 269 n n C19 C21 OM3 sing 270 n n C20 O31 OM3 sing 271 n n C20 O32 OM3 sing 272 n n C21 C25 OM3 sing 273 n n C22 N27 OM3 sing 274 n n C23 N27 OM3 sing 275 n n C24 N27 OM3 sing 276 n n C25 N26 OM3 sing 277 n n C1 H1 OM3 sing 278 n n C2 H2 OM3 sing 279 n n C3 H3 OM3 sing 280 n n C4 H4 OM3 sing 281 n n C5 H5 OM3 sing 282 n n C6 H6 OM3 sing 283 n n C23 H231 OM3 sing 284 n n C23 H232 OM3 sing 285 n n C24 H241 OM3 sing 286 n n C24 H242 OM3 sing 287 n n N26 H26 OM3 sing 288 n n O28 H28 OM3 sing 289 n n C15 H151 OM3 sing 290 n n C15 H152 OM3 sing 291 n n C16 H161 OM3 sing 292 n n C16 H162 OM3 sing 293 n n C17 H171 OM3 sing 294 n n C17 H172 OM3 sing 295 n n C18 H181 OM3 sing 296 n n C18 H182 OM3 sing 297 n n C19 H191 OM3 sing 298 n n C19 H192 OM3 sing 299 n n C21 H21 OM3 sing 300 n n C20 H201 OM3 sing 301 n n C20 H202 OM3 sing 302 n n C25 H251 OM3 sing 303 n n C25 H252 OM3 sing 304 n n C22 H221 OM3 sing 305 n n C22 H222 OM3 sing 306 n n C22 H223 OM3 sing 307 n n N27 H227 OM3 sing 308 n n # _atom_sites.entry_id 4CFB _atom_sites.fract_transf_matrix[1][1] 0.014053 _atom_sites.fract_transf_matrix[1][2] 0.008113 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016227 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01492 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 SO4 A 1 1210 1210 SO4 SO4 . D 2 SO4 A 1 1211 1211 SO4 SO4 . E 2 SO4 A 1 1212 1212 SO4 SO4 . F 3 ACT A 1 1213 1213 ACT ACT . G 3 ACT A 1 1214 1214 ACT ACT . H 3 ACT A 1 1215 1215 ACT ACT . I 3 ACT A 1 1216 1216 ACT ACT . J 4 OM3 A 1 1217 1217 OM3 OM3 . K 2 SO4 B 1 1210 1210 SO4 SO4 . L 2 SO4 B 1 1211 1211 SO4 SO4 . M 2 SO4 B 1 1212 1212 SO4 SO4 . N 3 ACT B 1 1213 1213 ACT ACT . O 4 OM3 B 1 1214 1214 OM3 OM3 . P 5 HOH A 1 2001 2001 HOH HOH . P 5 HOH A 2 2002 2002 HOH HOH . P 5 HOH A 3 2003 2003 HOH HOH . P 5 HOH A 4 2004 2004 HOH HOH . P 5 HOH A 5 2005 2005 HOH HOH . P 5 HOH A 6 2006 2006 HOH HOH . P 5 HOH A 7 2007 2007 HOH HOH . P 5 HOH A 8 2008 2008 HOH HOH . P 5 HOH A 9 2009 2009 HOH HOH . P 5 HOH A 10 2010 2010 HOH HOH . P 5 HOH A 11 2011 2011 HOH HOH . P 5 HOH A 12 2012 2012 HOH HOH . P 5 HOH A 13 2013 2013 HOH HOH . P 5 HOH A 14 2014 2014 HOH HOH . P 5 HOH A 15 2015 2015 HOH HOH . P 5 HOH A 16 2016 2016 HOH HOH . P 5 HOH A 17 2017 2017 HOH HOH . P 5 HOH A 18 2018 2018 HOH HOH . P 5 HOH A 19 2019 2019 HOH HOH . P 5 HOH A 20 2020 2020 HOH HOH . P 5 HOH A 21 2021 2021 HOH HOH . P 5 HOH A 22 2022 2022 HOH HOH . P 5 HOH A 23 2023 2023 HOH HOH . P 5 HOH A 24 2024 2024 HOH HOH . P 5 HOH A 25 2025 2025 HOH HOH . P 5 HOH A 26 2026 2026 HOH HOH . P 5 HOH A 27 2027 2027 HOH HOH . P 5 HOH A 28 2028 2028 HOH HOH . P 5 HOH A 29 2029 2029 HOH HOH . P 5 HOH A 30 2030 2030 HOH HOH . P 5 HOH A 31 2031 2031 HOH HOH . P 5 HOH A 32 2032 2032 HOH HOH . P 5 HOH A 33 2033 2033 HOH HOH . P 5 HOH A 34 2034 2034 HOH HOH . P 5 HOH A 35 2035 2035 HOH HOH . P 5 HOH A 36 2036 2036 HOH HOH . P 5 HOH A 37 2037 2037 HOH HOH . P 5 HOH A 38 2038 2038 HOH HOH . P 5 HOH A 39 2039 2039 HOH HOH . P 5 HOH A 40 2040 2040 HOH HOH . P 5 HOH A 41 2041 2041 HOH HOH . P 5 HOH A 42 2042 2042 HOH HOH . P 5 HOH A 43 2043 2043 HOH HOH . P 5 HOH A 44 2044 2044 HOH HOH . P 5 HOH A 45 2045 2045 HOH HOH . P 5 HOH A 46 2046 2046 HOH HOH . P 5 HOH A 47 2047 2047 HOH HOH . P 5 HOH A 48 2048 2048 HOH HOH . P 5 HOH A 49 2049 2049 HOH HOH . P 5 HOH A 50 2050 2050 HOH HOH . P 5 HOH A 51 2051 2051 HOH HOH . P 5 HOH A 52 2052 2052 HOH HOH . P 5 HOH A 53 2053 2053 HOH HOH . P 5 HOH A 54 2054 2054 HOH HOH . P 5 HOH A 55 2055 2055 HOH HOH . P 5 HOH A 56 2056 2056 HOH HOH . P 5 HOH A 57 2057 2057 HOH HOH . Q 5 HOH B 1 2001 2001 HOH HOH . Q 5 HOH B 2 2002 2002 HOH HOH . Q 5 HOH B 3 2003 2003 HOH HOH . Q 5 HOH B 4 2004 2004 HOH HOH . Q 5 HOH B 5 2005 2005 HOH HOH . Q 5 HOH B 6 2006 2006 HOH HOH . Q 5 HOH B 7 2007 2007 HOH HOH . Q 5 HOH B 8 2008 2008 HOH HOH . Q 5 HOH B 9 2009 2009 HOH HOH . Q 5 HOH B 10 2010 2010 HOH HOH . Q 5 HOH B 11 2011 2011 HOH HOH . Q 5 HOH B 12 2012 2012 HOH HOH . Q 5 HOH B 13 2013 2013 HOH HOH . Q 5 HOH B 14 2014 2014 HOH HOH . Q 5 HOH B 15 2015 2015 HOH HOH . Q 5 HOH B 16 2016 2016 HOH HOH . Q 5 HOH B 17 2017 2017 HOH HOH . Q 5 HOH B 18 2018 2018 HOH HOH . Q 5 HOH B 19 2019 2019 HOH HOH . Q 5 HOH B 20 2020 2020 HOH HOH . Q 5 HOH B 21 2021 2021 HOH HOH . Q 5 HOH B 22 2022 2022 HOH HOH . Q 5 HOH B 23 2023 2023 HOH HOH . Q 5 HOH B 24 2024 2024 HOH HOH . Q 5 HOH B 25 2025 2025 HOH HOH . Q 5 HOH B 26 2026 2026 HOH HOH . Q 5 HOH B 27 2027 2027 HOH HOH . Q 5 HOH B 28 2028 2028 HOH HOH . Q 5 HOH B 29 2029 2029 HOH HOH . Q 5 HOH B 30 2030 2030 HOH HOH . Q 5 HOH B 31 2031 2031 HOH HOH . Q 5 HOH B 32 2032 2032 HOH HOH . Q 5 HOH B 33 2033 2033 HOH HOH . Q 5 HOH B 34 2034 2034 HOH HOH . Q 5 HOH B 35 2035 2035 HOH HOH . Q 5 HOH B 36 2036 2036 HOH HOH . Q 5 HOH B 37 2037 2037 HOH HOH . Q 5 HOH B 38 2038 2038 HOH HOH . Q 5 HOH B 39 2039 2039 HOH HOH . Q 5 HOH B 40 2040 2040 HOH HOH . Q 5 HOH B 41 2041 2041 HOH HOH . Q 5 HOH B 42 2042 2042 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 OM3 . . . J 4 -36.33 33.083 -6.188 0.9 33.22 ? C1 OM3 1217 A 1 HETATM 2 C C2 OM3 . . . J 4 -36.597 34.243 -5.503 0.9 32.44 ? C2 OM3 1217 A 1 HETATM 3 C C3 OM3 . . . J 4 -36.267 31.874 -5.513 0.9 34.39 ? C3 OM3 1217 A 1 HETATM 4 C C4 OM3 . . . J 4 -36.807 34.184 -4.14 0.9 32.9 ? C4 OM3 1217 A 1 HETATM 5 C C5 OM3 . . . J 4 -33.553 32.497 1.185 0.9 29.74 ? C5 OM3 1217 A 1 HETATM 6 C C6 OM3 . . . J 4 -32.669 32.948 2.161 0.9 25.81 ? C6 OM3 1217 A 1 HETATM 7 C C7 OM3 . . . J 4 -36.474 31.816 -4.149 0.9 33.1 ? C7 OM3 1217 A 1 HETATM 8 C C8 OM3 . . . J 4 -32.863 34.25 -0.346 0.9 25.69 ? C8 OM3 1217 A 1 HETATM 9 C C9 OM3 . . . J 4 -36.75 32.98 -3.46 0.9 33.65 ? C9 OM3 1217 A 1 HETATM 10 C C10 OM3 . . . J 4 -33.655 33.133 -0.057 0.9 28.32 ? C10 OM3 1217 A 1 HETATM 11 C C11 OM3 . . . J 4 -31.895 34.048 1.85 0.9 24.92 ? C11 OM3 1217 A 1 HETATM 12 C C12 OM3 . . . J 4 -31.986 34.677 0.638 0.9 25.69 ? C12 OM3 1217 A 1 HETATM 13 C C13 OM3 . . . J 4 -36.409 30.509 -3.441 0.9 35.15 ? C13 OM3 1217 A 1 HETATM 14 C C14 OM3 . . . J 4 -32.918 34.939 -1.664 0.9 24.02 ? C14 OM3 1217 A 1 HETATM 15 C C15 OM3 . . . J 4 -32.172 28.374 -0.126 0.9 35.62 ? C15 OM3 1217 A 1 HETATM 16 C C16 OM3 . . . J 4 -33.419 28.868 0.18 0.9 36.8 ? C16 OM3 1217 A 1 HETATM 17 C C17 OM3 . . . J 4 -31.912 27.877 -1.383 0.9 33.27 ? C17 OM3 1217 A 1 HETATM 18 C C18 OM3 . . . J 4 -34.405 28.882 -0.784 0.9 36.66 ? C18 OM3 1217 A 1 HETATM 19 C C19 OM3 . . . J 4 -32.901 27.894 -2.337 0.9 34.42 ? C19 OM3 1217 A 1 HETATM 20 C C20 OM3 . . . J 4 -30.459 35.666 1.83 0.9 26.38 ? C20 OM3 1217 A 1 HETATM 21 C C21 OM3 . . . J 4 -34.15 28.393 -2.051 0.9 35.98 ? C21 OM3 1217 A 1 HETATM 22 C C22 OM3 . . . J 4 -36.362 34.065 0.099 0.9 32.51 ? C22 OM3 1217 A 1 HETATM 23 C C23 OM3 . . . J 4 -36.985 32.964 -1.986 0.9 33.6 ? C23 OM3 1217 A 1 HETATM 24 C C24 OM3 . . . J 4 -34.644 32.6 -1.068 0.9 28.3 ? C24 OM3 1217 A 1 HETATM 25 C C25 OM3 . . . J 4 -35.222 28.413 -3.095 0.9 35.23 ? C25 OM3 1217 A 1 HETATM 26 N N26 OM3 . . . J 4 -35.312 29.714 -3.702 0.9 35.79 ? N26 OM3 1217 A 1 HETATM 27 N N27 OM3 . . . J 4 -35.85 33.492 -1.184 0.9 32.76 ? N27 OM3 1217 A 1 HETATM 28 O O28 OM3 . . . J 4 -31.837 35.465 -2.066 0.9 18.73 ? O28 OM3 1217 A 1 HETATM 29 O O29 OM3 . . . J 4 -37.306 30.18 -2.676 0.9 35.45 ? O29 OM3 1217 A 1 HETATM 30 O O30 OM3 . . . J 4 -34.003 34.941 -2.319 0.9 23.59 ? O30 OM3 1217 A 1 HETATM 31 O O31 OM3 . . . J 4 -30.965 34.629 2.675 0.9 25.41 ? O31 OM3 1217 A 1 HETATM 32 O O32 OM3 . . . J 4 -31.117 35.747 0.547 0.9 27.84 ? O32 OM3 1217 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 19 _model_server_stats.query_time_ms 359 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 32 #