data_4CFC # _model_server_result.job_id 5uGXmo8J5sb82sLJhjdWIA _model_server_result.datetime_utc '2024-11-08 03:53:46' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4cfc # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":1216}' # _entry.id 4CFC # _exptl.entry_id 4CFC _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 441.477 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '5-[[[(1S)-2-(butylamino)-2-oxidanylidene-1-phenyl-ethyl]carbamoyl-methyl-amino]methyl]-1,3-benzodioxole-4-carboxylic acid' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4CFC _cell.length_a 71.324 _cell.length_b 71.324 _cell.length_c 66.442 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4CFC _symmetry.cell_setting ? _symmetry.Int_Tables_number 144 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 31' # _pdbx_struct_assembly.method_details PQS _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 I N N ? 5 P N N # _chem_comp.formula 'C23 H27 N3 O6' _chem_comp.formula_weight 441.477 _chem_comp.id 7NV _chem_comp.mon_nstd_flag . _chem_comp.name '5-[[[(1S)-2-(butylamino)-2-oxidanylidene-1-phenyl-ethyl]carbamoyl-methyl-amino]methyl]-1,3-benzodioxole-4-carboxylic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C15 C16 7NV sing 1 n y C15 C3 7NV doub 2 n y C16 C17 7NV doub 3 n y C17 C18 7NV sing 4 n y C23 C24 7NV sing 5 n y C23 C22 7NV doub 6 n y C6 C7 7NV sing 7 n n C6 C5 7NV sing 8 n n C24 C25 7NV doub 9 n y C9 N26 7NV sing 10 n n C13 C18 7NV sing 11 n n C13 C2 7NV sing 12 n n C13 N25 7NV sing 13 n n C30 C22 7NV sing 14 n y C30 C29 7NV doub 15 n y C30 C31 7NV sing 16 n n C5 C4 7NV sing 17 n n C18 C19 7NV doub 18 n y C22 C21 7NV sing 19 n n C25 C29 7NV sing 20 n y C25 O26 7NV sing 21 n n C29 O28 7NV sing 22 n n C2 N3 7NV sing 23 n n C2 O1 7NV doub 24 n n C31 O33 7NV doub 25 n n C31 O32 7NV sing 26 n n C27 O26 7NV sing 27 n n C27 O28 7NV sing 28 n n C12 O11 7NV doub 29 n n C12 N25 7NV sing 30 n n C12 N26 7NV sing 31 n n C4 N3 7NV sing 32 n n C19 C3 7NV sing 33 n y C21 N26 7NV sing 34 n n C15 H15 7NV sing 35 n n C16 H16 7NV sing 36 n n C3 H3 7NV sing 37 n n C17 H17 7NV sing 38 n n C23 H23 7NV sing 39 n n C24 H24 7NV sing 40 n n C6 H61C 7NV sing 41 n n C6 H62C 7NV sing 42 n n C7 H71C 7NV sing 43 n n C7 H72C 7NV sing 44 n n C7 H73C 7NV sing 45 n n C5 H51C 7NV sing 46 n n C5 H52C 7NV sing 47 n n C9 H91C 7NV sing 48 n n C9 H92C 7NV sing 49 n n C9 H93C 7NV sing 50 n n C13 H13 7NV sing 51 n n N25 H25 7NV sing 52 n n C4 H41C 7NV sing 53 n n C4 H42C 7NV sing 54 n n C19 H19 7NV sing 55 n n C21 H211 7NV sing 56 n n C21 H212 7NV sing 57 n n N3 HA 7NV sing 58 n n O32 H32 7NV sing 59 n n C27 H271 7NV sing 60 n n C27 H272 7NV sing 61 n n # _atom_sites.entry_id 4CFC _atom_sites.fract_transf_matrix[1][1] 0.014021 _atom_sites.fract_transf_matrix[1][2] 0.008095 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01619 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015051 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 SO4 A 1 1210 1210 SO4 SO4 . D 2 SO4 A 1 1211 1211 SO4 SO4 . E 2 SO4 A 1 1212 1212 SO4 SO4 . F 2 SO4 A 1 1213 1213 SO4 SO4 . G 3 ACT A 1 1214 1214 ACT ACT . H 4 CL A 1 1215 1215 CL CL . I 5 7NV A 1 1216 1216 7NV 7NV . J 2 SO4 B 1 1210 1210 SO4 SO4 . K 2 SO4 B 1 1211 1211 SO4 SO4 . L 2 SO4 B 1 1212 1212 SO4 SO4 . M 2 SO4 B 1 1213 1213 SO4 SO4 . N 3 ACT B 1 1214 1214 ACT ACT . O 4 CL B 1 1215 1215 CL CL . P 5 7NV B 1 1216 1216 7NV 7NV . Q 6 HOH A 1 2001 2001 HOH HOH . Q 6 HOH A 2 2002 2002 HOH HOH . Q 6 HOH A 3 2003 2003 HOH HOH . Q 6 HOH A 4 2004 2004 HOH HOH . Q 6 HOH A 5 2005 2005 HOH HOH . Q 6 HOH A 6 2006 2006 HOH HOH . Q 6 HOH A 7 2007 2007 HOH HOH . Q 6 HOH A 8 2008 2008 HOH HOH . Q 6 HOH A 9 2009 2009 HOH HOH . Q 6 HOH A 10 2010 2010 HOH HOH . Q 6 HOH A 11 2011 2011 HOH HOH . Q 6 HOH A 12 2012 2012 HOH HOH . Q 6 HOH A 13 2013 2013 HOH HOH . Q 6 HOH A 14 2014 2014 HOH HOH . Q 6 HOH A 15 2015 2015 HOH HOH . Q 6 HOH A 16 2016 2016 HOH HOH . Q 6 HOH A 17 2017 2017 HOH HOH . Q 6 HOH A 18 2018 2018 HOH HOH . Q 6 HOH A 19 2019 2019 HOH HOH . Q 6 HOH A 20 2020 2020 HOH HOH . Q 6 HOH A 21 2021 2021 HOH HOH . Q 6 HOH A 22 2022 2022 HOH HOH . Q 6 HOH A 23 2023 2023 HOH HOH . Q 6 HOH A 24 2024 2024 HOH HOH . Q 6 HOH A 25 2025 2025 HOH HOH . Q 6 HOH A 26 2026 2026 HOH HOH . Q 6 HOH A 27 2027 2027 HOH HOH . Q 6 HOH A 28 2028 2028 HOH HOH . Q 6 HOH A 29 2029 2029 HOH HOH . Q 6 HOH A 30 2030 2030 HOH HOH . Q 6 HOH A 31 2031 2031 HOH HOH . Q 6 HOH A 32 2032 2032 HOH HOH . Q 6 HOH A 33 2033 2033 HOH HOH . Q 6 HOH A 34 2034 2034 HOH HOH . Q 6 HOH A 35 2035 2035 HOH HOH . Q 6 HOH A 36 2036 2036 HOH HOH . Q 6 HOH A 37 2037 2037 HOH HOH . Q 6 HOH A 38 2038 2038 HOH HOH . Q 6 HOH A 39 2039 2039 HOH HOH . Q 6 HOH A 40 2040 2040 HOH HOH . Q 6 HOH A 41 2041 2041 HOH HOH . Q 6 HOH A 42 2042 2042 HOH HOH . Q 6 HOH A 43 2043 2043 HOH HOH . Q 6 HOH A 44 2044 2044 HOH HOH . Q 6 HOH A 45 2045 2045 HOH HOH . Q 6 HOH A 46 2046 2046 HOH HOH . Q 6 HOH A 47 2047 2047 HOH HOH . Q 6 HOH A 48 2048 2048 HOH HOH . Q 6 HOH A 49 2049 2049 HOH HOH . Q 6 HOH A 50 2050 2050 HOH HOH . Q 6 HOH A 51 2051 2051 HOH HOH . Q 6 HOH A 52 2052 2052 HOH HOH . Q 6 HOH A 53 2053 2053 HOH HOH . Q 6 HOH A 54 2054 2054 HOH HOH . Q 6 HOH A 55 2055 2055 HOH HOH . Q 6 HOH A 56 2056 2056 HOH HOH . Q 6 HOH A 57 2057 2057 HOH HOH . Q 6 HOH A 58 2058 2058 HOH HOH . Q 6 HOH A 59 2059 2059 HOH HOH . Q 6 HOH A 60 2060 2060 HOH HOH . Q 6 HOH A 61 2061 2061 HOH HOH . Q 6 HOH A 62 2062 2062 HOH HOH . Q 6 HOH A 63 2063 2063 HOH HOH . Q 6 HOH A 64 2064 2064 HOH HOH . R 6 HOH B 1 2001 2001 HOH HOH . R 6 HOH B 2 2002 2002 HOH HOH . R 6 HOH B 3 2003 2003 HOH HOH . R 6 HOH B 4 2004 2004 HOH HOH . R 6 HOH B 5 2005 2005 HOH HOH . R 6 HOH B 6 2006 2006 HOH HOH . R 6 HOH B 7 2007 2007 HOH HOH . R 6 HOH B 8 2008 2008 HOH HOH . R 6 HOH B 9 2009 2009 HOH HOH . R 6 HOH B 10 2010 2010 HOH HOH . R 6 HOH B 11 2011 2011 HOH HOH . R 6 HOH B 12 2012 2012 HOH HOH . R 6 HOH B 13 2013 2013 HOH HOH . R 6 HOH B 14 2014 2014 HOH HOH . R 6 HOH B 15 2015 2015 HOH HOH . R 6 HOH B 16 2016 2016 HOH HOH . R 6 HOH B 17 2017 2017 HOH HOH . R 6 HOH B 18 2018 2018 HOH HOH . R 6 HOH B 19 2019 2019 HOH HOH . R 6 HOH B 20 2020 2020 HOH HOH . R 6 HOH B 21 2021 2021 HOH HOH . R 6 HOH B 22 2022 2022 HOH HOH . R 6 HOH B 23 2023 2023 HOH HOH . R 6 HOH B 24 2024 2024 HOH HOH . R 6 HOH B 25 2025 2025 HOH HOH . R 6 HOH B 26 2026 2026 HOH HOH . R 6 HOH B 27 2027 2027 HOH HOH . R 6 HOH B 28 2028 2028 HOH HOH . R 6 HOH B 29 2029 2029 HOH HOH . R 6 HOH B 30 2030 2030 HOH HOH . R 6 HOH B 31 2031 2031 HOH HOH . R 6 HOH B 32 2032 2032 HOH HOH . R 6 HOH B 33 2033 2033 HOH HOH . R 6 HOH B 34 2034 2034 HOH HOH . R 6 HOH B 35 2035 2035 HOH HOH . R 6 HOH B 36 2036 2036 HOH HOH . R 6 HOH B 37 2037 2037 HOH HOH . R 6 HOH B 38 2038 2038 HOH HOH . R 6 HOH B 39 2039 2039 HOH HOH . R 6 HOH B 40 2040 2040 HOH HOH . R 6 HOH B 41 2041 2041 HOH HOH . R 6 HOH B 42 2042 2042 HOH HOH . R 6 HOH B 43 2043 2043 HOH HOH . R 6 HOH B 44 2044 2044 HOH HOH . R 6 HOH B 45 2045 2045 HOH HOH . R 6 HOH B 46 2046 2046 HOH HOH . R 6 HOH B 47 2047 2047 HOH HOH . R 6 HOH B 48 2048 2048 HOH HOH . R 6 HOH B 49 2049 2049 HOH HOH . R 6 HOH B 50 2050 2050 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C15 7NV . . . I 5 12.75 -49.298 -0.801 0.8 44.36 ? C15 7NV 1216 A 1 HETATM 2 C C16 7NV . . . I 5 12.773 -49.378 0.574 0.8 43.92 ? C16 7NV 1216 A 1 HETATM 3 C C17 7NV . . . I 5 11.68 -48.954 1.301 0.8 42.38 ? C17 7NV 1216 A 1 HETATM 4 C C23 7NV . . . I 5 11.037 -43.995 -1.239 0.8 29.61 ? C23 7NV 1216 A 1 HETATM 5 C C6 7NV . . . I 5 10.663 -48.274 7.121 0.8 41.75 ? C6 7NV 1216 A 1 HETATM 6 C C24 7NV . . . I 5 11.88 -44.269 -2.291 0.8 29.49 ? C24 7NV 1216 A 1 HETATM 7 C C7 7NV . . . I 5 11.878 -48.918 7.744 0.8 40.01 ? C7 7NV 1216 A 1 HETATM 8 C C9 7NV . . . I 5 7.994 -43.381 0.351 0.8 35.79 ? C9 7NV 1216 A 1 HETATM 9 C C13 7NV . . . I 5 9.378 -47.963 1.411 0.8 41.12 ? C13 7NV 1216 A 1 HETATM 10 C C30 7NV . . . I 5 12.505 -44.981 0.391 0.8 30 ? C30 7NV 1216 A 1 HETATM 11 C C5 7NV . . . I 5 10.508 -48.691 5.683 0.8 41.3 ? C5 7NV 1216 A 1 HETATM 12 C C18 7NV . . . I 5 10.566 -48.448 0.661 0.8 41.77 ? C18 7NV 1216 A 1 HETATM 13 C C22 7NV . . . I 5 11.314 -44.331 0.078 0.8 29.62 ? C22 7NV 1216 A 1 HETATM 14 C C25 7NV . . . I 5 13.048 -44.903 -1.969 0.8 30.91 ? C25 7NV 1216 A 1 HETATM 15 C C29 7NV . . . I 5 13.348 -45.246 -0.677 0.8 31.18 ? C29 7NV 1216 A 1 HETATM 16 C C2 7NV . . . I 5 9.206 -48.611 2.762 0.8 41.3 ? C2 7NV 1216 A 1 HETATM 17 C C31 7NV . . . I 5 12.922 -45.392 1.77 0.8 27.24 ? C31 7NV 1216 A 1 HETATM 18 C C27 7NV . . . I 5 15.022 -45.719 -1.955 0.8 33.84 ? C27 7NV 1216 A 1 HETATM 19 C C12 7NV . . . I 5 8.534 -45.729 0.935 0.8 36.06 ? C12 7NV 1216 A 1 HETATM 20 C C4 7NV . . . I 5 9.135 -48.275 5.204 0.8 41.79 ? C4 7NV 1216 A 1 HETATM 21 C C19 7NV . . . I 5 10.548 -48.369 -0.711 0.8 43.23 ? C19 7NV 1216 A 1 HETATM 22 C C21 7NV . . . I 5 10.275 -43.958 1.108 0.8 31.81 ? C21 7NV 1216 A 1 HETATM 23 N N3 7NV . . . I 5 9.194 -47.762 3.851 0.8 42.21 ? N3 7NV 1216 A 1 HETATM 24 O O33 7NV . . . I 5 12.042 -45.925 2.488 0.8 28.52 ? O33 7NV 1216 A 1 HETATM 25 O O1 7NV . . . I 5 9.095 -49.823 2.828 0.8 42.49 ? O1 7NV 1216 A 1 HETATM 26 O O32 7NV . . . I 5 14.127 -45.181 2.116 0.8 22.85 ? O32 7NV 1216 A 1 HETATM 27 O O26 7NV . . . I 5 14.013 -45.251 -2.861 0.8 32.2 ? O26 7NV 1216 A 1 HETATM 28 O O28 7NV . . . I 5 14.569 -45.869 -0.598 0.8 33.28 ? O28 7NV 1216 A 1 HETATM 29 O O11 7NV . . . I 5 7.447 -46.168 0.574 0.8 32.27 ? O11 7NV 1216 A 1 HETATM 30 C C3 7NV . . . I 5 11.634 -48.794 -1.436 0.8 44.84 ? C3 7NV 1216 A 1 HETATM 31 N N25 7NV . . . I 5 9.468 -46.533 1.579 0.8 37.52 ? N25 7NV 1216 A 1 HETATM 32 N N26 7NV . . . I 5 8.943 -44.409 0.746 0.8 35.21 ? N26 7NV 1216 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 28 _model_server_stats.query_time_ms 288 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 32 #