data_4CFE
#
_model_server_result.job_id            tSqBU2r9RAzRdy8-wcL5vg 
_model_server_result.datetime_utc      '2025-01-05 02:43:57' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4cfe 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"J","auth_seq_id":1553}' 
#
_entry.id    4CFE 
#
_exptl.entry_id    4CFE 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              431.871 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '5-[[6-chloranyl-5-(1-methylindol-5-yl)-1H-benzimidazol-2-yl]oxy]-2-methyl-benzoic acid' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          92.42 
_cell.angle_gamma         90 
_cell.entry_id            4CFE 
_cell.length_a            76.03 
_cell.length_b            134.141 
_cell.length_c            140.558 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4CFE 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA trimeric 3 author_and_software_defined_assembly 1 
PISA trimeric 3 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
C,D,F,I,J,N,O,P,S,T,V 1 1 
A,B,E,G,H,K,L,M,Q,R,U 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 5 H N N 
? 5 J N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A C ARG 190 A ARG 171 1_555 A N TPO 191 A TPO 172 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? 
covale ? covale2 A C TPO 191 A TPO 172 1_555 A N SER 192 A SER 173 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? 
covale ? covale3 B C ARG 123 B ARG 107 1_555 B N SEP 124 B SEP 108 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? 
covale ? covale4 B C SEP 124 B SEP 108 1_555 B N HIS 125 B HIS 109 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? 
covale ? covale5 C C ARG 190 C ARG 171 1_555 C N TPO 191 C TPO 172 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? 
covale ? covale6 C C TPO 191 C TPO 172 1_555 C N SER 192 C SER 173 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? 
covale ? covale7 D C ARG 123 D ARG 107 1_555 D N SEP 124 D SEP 108 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? 
covale ? covale8 D C SEP 124 D SEP 108 1_555 D N HIS 125 D HIS 109 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? 
#
_chem_comp.formula           'C24 H18 Cl N3 O3' 
_chem_comp.formula_weight    431.871 
_chem_comp.id                992 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '5-[[6-chloranyl-5-(1-methylindol-5-yl)-1H-benzimidazol-2-yl]oxy]-2-methyl-benzoic acid' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C6 C21 992 sing 1 n y 
C6 C5 992 doub 2 n y 
C6 C8 992 sing 3 n y 
C21 C2 992 doub 4 n y 
C5 N7 992 sing 5 n y 
C5 C4 992 sing 6 n y 
N7 C1 992 sing 7 n n 
N7 C9 992 sing 8 n y 
C4 C3 992 doub 9 n y 
C3 C2 992 sing 10 n y 
C2 C7 992 sing 11 n n 
C7 C10 992 sing 12 n y 
C7 C14 992 doub 13 n y 
C10 C11 992 doub 14 n y 
C10 CL1 992 sing 15 n n 
C11 C12 992 sing 16 n y 
C12 C13 992 doub 17 n y 
C12 N21 992 sing 18 n y 
C13 C14 992 sing 19 n y 
C13 N22 992 sing 20 n y 
N21 C23 992 sing 21 n y 
N22 C23 992 doub 22 n y 
C23 O25 992 sing 23 n n 
O25 C26 992 sing 24 n n 
C26 C27 992 sing 25 n y 
C26 C31 992 doub 26 n y 
C27 C28 992 doub 27 n y 
C28 C29 992 sing 28 n y 
C29 C30 992 doub 29 n y 
C29 C32 992 sing 30 n n 
C30 C31 992 sing 31 n y 
C30 C18 992 sing 32 n n 
C8 C9 992 doub 33 n y 
C18 O19 992 sing 34 n n 
C18 O20 992 doub 35 n n 
C21 H21 992 sing 36 n n 
C8 H8 992 sing 37 n n 
C4 H4 992 sing 38 n n 
C1 H11C 992 sing 39 n n 
C1 H12C 992 sing 40 n n 
C1 H13C 992 sing 41 n n 
C9 H9 992 sing 42 n n 
C3 H3 992 sing 43 n n 
C14 H14 992 sing 44 n n 
C11 H11 992 sing 45 n n 
N21 HA 992 sing 46 n n 
C27 H27 992 sing 47 n n 
C31 H31 992 sing 48 n n 
C28 H28 992 sing 49 n n 
C32 H321 992 sing 50 n n 
C32 H322 992 sing 51 n n 
C32 H323 992 sing 52 n n 
O19 H19 992 sing 53 n n 
#
_atom_sites.entry_id                     4CFE 
_atom_sites.fract_transf_matrix[1][1]    0.013153 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.000556 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.007455 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007121 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
G 4 STU A 1 1552 1552 STU STU . 
H 5 992 A 1 1553 1553 992 992 . 
I 4 STU C 1 1552 1552 STU STU . 
J 5 992 C 1 1553 1553 992 992 . 
K 6 AMP E 1 1326 1326 AMP AMP . 
L 6 AMP E 1 1327 1327 AMP AMP . 
M 6 AMP E 1 1328 1328 AMP AMP . 
N 6 AMP F 1 1326 1326 AMP AMP . 
O 6 AMP F 1 1327 1327 AMP AMP . 
P 6 AMP F 1 1328 1328 AMP AMP . 
Q 7 HOH A 1 2001 2001 HOH HOH . 
Q 7 HOH A 2 2002 2002 HOH HOH . 
Q 7 HOH A 3 2003 2003 HOH HOH . 
Q 7 HOH A 4 2004 2004 HOH HOH . 
Q 7 HOH A 5 2005 2005 HOH HOH . 
Q 7 HOH A 6 2006 2006 HOH HOH . 
Q 7 HOH A 7 2007 2007 HOH HOH . 
Q 7 HOH A 8 2008 2008 HOH HOH . 
Q 7 HOH A 9 2009 2009 HOH HOH . 
Q 7 HOH A 10 2010 2010 HOH HOH . 
Q 7 HOH A 11 2011 2011 HOH HOH . 
Q 7 HOH A 12 2012 2012 HOH HOH . 
Q 7 HOH A 13 2013 2013 HOH HOH . 
R 7 HOH B 1 2001 2001 HOH HOH . 
R 7 HOH B 2 2002 2002 HOH HOH . 
R 7 HOH B 3 2003 2003 HOH HOH . 
R 7 HOH B 4 2004 2004 HOH HOH . 
R 7 HOH B 5 2005 2005 HOH HOH . 
R 7 HOH B 6 2006 2006 HOH HOH . 
S 7 HOH C 1 2001 2001 HOH HOH . 
S 7 HOH C 2 2002 2002 HOH HOH . 
S 7 HOH C 3 2003 2003 HOH HOH . 
S 7 HOH C 4 2004 2004 HOH HOH . 
S 7 HOH C 5 2005 2005 HOH HOH . 
S 7 HOH C 6 2006 2006 HOH HOH . 
T 7 HOH D 1 2001 2001 HOH HOH . 
U 7 HOH E 1 2001 2001 HOH HOH . 
U 7 HOH E 2 2002 2002 HOH HOH . 
V 7 HOH F 1 2001 2001 HOH HOH . 
V 7 HOH F 2 2002 2002 HOH HOH . 
V 7 HOH F 3 2003 2003 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C6 992 . . . J 5 511.486 45.811 1051.452 1 76.65 ? C6 992 1553 C 1 
HETATM 2 C C21 992 . . . J 5 512.526 45.64 1050.501 1 74.98 ? C21 992 1553 C 1 
HETATM 3 C C5 992 . . . J 5 510.36 44.936 1051.47 1 77.15 ? C5 992 1553 C 1 
HETATM 4 N N7 992 . . . J 5 509.562 45.384 1052.495 1 77.81 ? N7 992 1553 C 1 
HETATM 5 C C4 992 . . . J 5 510.295 43.896 1050.533 1 76.9 ? C4 992 1553 C 1 
HETATM 6 C C3 992 . . . J 5 511.337 43.744 1049.61 1 76.07 ? C3 992 1553 C 1 
HETATM 7 C C2 992 . . . J 5 512.433 44.586 1049.582 1 75.16 ? C2 992 1553 C 1 
HETATM 8 C C1 992 . . . J 5 508.298 44.773 1052.867 1 78.75 ? C1 992 1553 C 1 
HETATM 9 C C7 992 . . . J 5 513.501 44.34 1048.542 1 74.83 ? C7 992 1553 C 1 
HETATM 10 C C10 992 . . . J 5 514.826 44.027 1048.911 1 74.35 ? C10 992 1553 C 1 
HETATM 11 C C11 992 . . . J 5 515.795 43.795 1047.916 1 73.69 ? C11 992 1553 C 1 
HETATM 12 C C12 992 . . . J 5 515.451 43.863 1046.564 1 74.03 ? C12 992 1553 C 1 
HETATM 13 C C13 992 . . . J 5 514.107 44.174 1046.198 1 74.5 ? C13 992 1553 C 1 
HETATM 14 C C14 992 . . . J 5 513.158 44.405 1047.187 1 74.88 ? C14 992 1553 C 1 
HETATM 15 N N21 992 . . . J 5 516.153 43.691 1045.397 1 74.22 ? N21 992 1553 C 1 
HETATM 16 N N22 992 . . . J 5 514.045 44.178 1044.811 1 74.45 ? N22 992 1553 C 1 
HETATM 17 C C23 992 . . . J 5 515.27 43.891 1044.426 1 74.3 ? C23 992 1553 C 1 
HETATM 18 O O25 992 . . . J 5 515.638 43.791 1043.074 1 74.79 ? O25 992 1553 C 1 
HETATM 19 C C26 992 . . . J 5 514.814 44.571 1042.242 1 74.86 ? C26 992 1553 C 1 
HETATM 20 C C27 992 . . . J 5 515.081 45.897 1042.055 1 74.34 ? C27 992 1553 C 1 
HETATM 21 C C28 992 . . . J 5 514.287 46.671 1041.234 1 74.93 ? C28 992 1553 C 1 
HETATM 22 C C29 992 . . . J 5 513.179 46.11 1040.563 1 76.45 ? C29 992 1553 C 1 
HETATM 23 C C30 992 . . . J 5 512.898 44.717 1040.753 1 77.4 ? C30 992 1553 C 1 
HETATM 24 C C31 992 . . . J 5 513.735 43.974 1041.596 1 76.14 ? C31 992 1553 C 1 
HETATM 25 C C32 992 . . . J 5 512.308 46.96 1039.664 1 75.84 ? C32 992 1553 C 1 
HETATM 26 CL CL1 992 . . . J 5 515.279 43.937 1050.584 1 75.56 ? CL1 992 1553 C 1 
HETATM 27 C C8 992 . . . J 5 511.299 46.757 1052.486 1 77.65 ? C8 992 1553 C 1 
HETATM 28 C C9 992 . . . J 5 510.094 46.437 1053.092 1 78.19 ? C9 992 1553 C 1 
HETATM 29 C C18 992 . . . J 5 511.754 44.074 1040.079 1 80.3 ? C18 992 1553 C 1 
HETATM 30 O O19 992 . . . J 5 510.64 43.982 1040.672 1 81.08 ? O19 992 1553 C 1 
HETATM 31 O O20 992 . . . J 5 511.891 43.622 1038.927 1 82.01 ? O20 992 1553 C 1 
#
_model_server_stats.io_time_ms              136 
_model_server_stats.parse_time_ms           24 
_model_server_stats.create_model_time_ms    120 
_model_server_stats.query_time_ms           305 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           31 
#