data_4CFH # _model_server_result.job_id w_6CdHhkrwgTxNazjhD-gQ _model_server_result.datetime_utc '2024-11-05 12:35:22' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4cfh # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":1550}' # _entry.id 4CFH # _exptl.entry_id 4CFH _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 466.531 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description STAUROSPORINE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4CFH _cell.length_a 133.917 _cell.length_b 133.917 _cell.length_c 141.896 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4CFH _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C ARG 190 A ARG 171 1_555 A N TPO 191 A TPO 172 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.339 ? covale ? covale2 A C TPO 191 A TPO 172 1_555 A N SER 192 A SER 173 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? # _chem_comp.formula 'C28 H26 N4 O3' _chem_comp.formula_weight 466.531 _chem_comp.id STU _chem_comp.mon_nstd_flag . _chem_comp.name STAUROSPORINE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O4 C25 STU sing 327 n n O4 C21 STU sing 328 n n C25 C24 STU sing 329 n n C25 N3 STU sing 330 n n C25 H25 STU sing 331 n n C24 C23 STU sing 332 n n C24 H241 STU sing 333 n n C24 H242 STU sing 334 n n C23 C22 STU sing 335 n n C23 N4 STU sing 336 n n C23 H23 STU sing 337 n n C22 C21 STU sing 338 n n C22 O6 STU sing 339 n n C22 H22 STU sing 340 n n C21 C26 STU sing 341 n n C21 N2 STU sing 342 n n C26 H261 STU sing 343 n n C26 H262 STU sing 344 n n C26 H263 STU sing 345 n n N2 C18 STU sing 346 n y N2 C17 STU sing 347 n y C18 C19 STU doub 348 n y C18 C11 STU sing 349 n y C19 C6 STU sing 350 n y C19 N3 STU sing 351 n y C6 C7 STU doub 352 n y C6 C5 STU sing 353 n y C7 C10 STU sing 354 n y C7 C8 STU sing 355 n n C10 C11 STU doub 356 n y C10 C9 STU sing 357 n n C11 C12 STU sing 358 n y C12 C17 STU doub 359 n y C12 C13 STU sing 360 n y C17 C16 STU sing 361 n y C16 C15 STU doub 362 n y C16 H16 STU sing 363 n n C15 C14 STU sing 364 n y C15 H15 STU sing 365 n n C14 C13 STU doub 366 n y C14 H14 STU sing 367 n n C13 H13 STU sing 368 n n C9 N1 STU sing 369 n n C9 H91 STU sing 370 n n C9 H92 STU sing 371 n n N1 C8 STU sing 372 n n N1 HN1 STU sing 373 n n C8 O5 STU doub 374 n n C5 C20 STU doub 375 n y C5 C4 STU sing 376 n y C20 C1 STU sing 377 n y C20 N3 STU sing 378 n y C1 C2 STU doub 379 n y C1 H1 STU sing 380 n n C2 C3 STU sing 381 n y C2 H2 STU sing 382 n n C3 C4 STU doub 383 n y C3 H3 STU sing 384 n n C4 H4 STU sing 385 n n O6 C27 STU sing 386 n n C27 H271 STU sing 387 n n C27 H272 STU sing 388 n n C27 H273 STU sing 389 n n N4 C28 STU sing 390 n n N4 HN4 STU sing 391 n n C28 H281 STU sing 392 n n C28 H282 STU sing 393 n n C28 H283 STU sing 394 n n # _atom_sites.entry_id 4CFH _atom_sites.fract_transf_matrix[1][1] 0.007467 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007467 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007047 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 5 STU A 1 1550 1550 STU STU . F 6 AMP E 1 1325 1325 AMP AMP . G 6 AMP E 1 1326 1326 AMP AMP . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O4 STU . . . E 5 -33.899 72.527 -4.061 1 107.11 ? O4 STU 1550 A 1 HETATM 2 C C25 STU . . . E 5 -34.392 72.132 -2.817 1 103.85 ? C25 STU 1550 A 1 HETATM 3 C C24 STU . . . E 5 -33.322 71.668 -1.843 1 94.36 ? C24 STU 1550 A 1 HETATM 4 C C23 STU . . . E 5 -31.965 71.998 -2.465 1 92.39 ? C23 STU 1550 A 1 HETATM 5 C C22 STU . . . E 5 -31.872 71.2 -3.774 1 96.38 ? C22 STU 1550 A 1 HETATM 6 C C21 STU . . . E 5 -32.973 71.696 -4.694 1 104.66 ? C21 STU 1550 A 1 HETATM 7 C C26 STU . . . E 5 -32.256 72.671 -5.616 1 99.73 ? C26 STU 1550 A 1 HETATM 8 N N2 STU . . . E 5 -33.586 70.585 -5.447 1 110.05 ? N2 STU 1550 A 1 HETATM 9 C C18 STU . . . E 5 -34.769 69.973 -5.025 1 112.81 ? C18 STU 1550 A 1 HETATM 10 C C19 STU . . . E 5 -35.593 70.236 -3.917 1 112.12 ? C19 STU 1550 A 1 HETATM 11 C C6 STU . . . E 5 -36.751 69.483 -3.696 1 115.47 ? C6 STU 1550 A 1 HETATM 12 C C7 STU . . . E 5 -37.096 68.448 -4.595 1 111.5 ? C7 STU 1550 A 1 HETATM 13 C C10 STU . . . E 5 -36.274 68.196 -5.685 1 112.74 ? C10 STU 1550 A 1 HETATM 14 C C11 STU . . . E 5 -35.122 68.943 -5.907 1 117.64 ? C11 STU 1550 A 1 HETATM 15 C C12 STU . . . E 5 -34.083 68.922 -6.932 1 118.06 ? C12 STU 1550 A 1 HETATM 16 C C17 STU . . . E 5 -33.157 69.944 -6.61 1 113.66 ? C17 STU 1550 A 1 HETATM 17 C C16 STU . . . E 5 -32.05 70.125 -7.452 1 113.66 ? C16 STU 1550 A 1 HETATM 18 C C15 STU . . . E 5 -31.911 69.312 -8.561 1 109.61 ? C15 STU 1550 A 1 HETATM 19 C C14 STU . . . E 5 -32.825 68.323 -8.855 1 121.87 ? C14 STU 1550 A 1 HETATM 20 C C13 STU . . . E 5 -33.928 68.105 -8.051 1 121.91 ? C13 STU 1550 A 1 HETATM 21 C C9 STU . . . E 5 -36.904 67.051 -6.434 1 126.43 ? C9 STU 1550 A 1 HETATM 22 N N1 STU . . . E 5 -38.116 66.689 -5.692 1 120.55 ? N1 STU 1550 A 1 HETATM 23 C C8 STU . . . E 5 -38.223 67.501 -4.629 1 116.42 ? C8 STU 1550 A 1 HETATM 24 O O5 STU . . . E 5 -39.126 67.455 -3.815 1 119.59 ? O5 STU 1550 A 1 HETATM 25 C C5 STU . . . E 5 -37.353 70.017 -2.479 1 112.96 ? C5 STU 1550 A 1 HETATM 26 C C20 STU . . . E 5 -36.519 71.066 -2.037 1 99.43 ? C20 STU 1550 A 1 HETATM 27 C C1 STU . . . E 5 -36.825 71.786 -0.887 1 96.54 ? C1 STU 1550 A 1 HETATM 28 C C2 STU . . . E 5 -37.975 71.428 -0.207 1 112.42 ? C2 STU 1550 A 1 HETATM 29 C C3 STU . . . E 5 -38.791 70.398 -0.637 1 103.3 ? C3 STU 1550 A 1 HETATM 30 C C4 STU . . . E 5 -38.506 69.669 -1.778 1 114.83 ? C4 STU 1550 A 1 HETATM 31 N N3 STU . . . E 5 -35.466 71.161 -2.937 1 108.18 ? N3 STU 1550 A 1 HETATM 32 O O6 STU . . . E 5 -32.115 69.819 -3.492 1 87.28 ? O6 STU 1550 A 1 HETATM 33 C C27 STU . . . E 5 -30.979 69.086 -3.951 1 84.42 ? C27 STU 1550 A 1 HETATM 34 N N4 STU . . . E 5 -30.878 71.643 -1.544 1 86.77 ? N4 STU 1550 A 1 HETATM 35 C C28 STU . . . E 5 -29.635 72.125 -2.161 1 86.85 ? C28 STU 1550 A 1 # _model_server_stats.io_time_ms 72 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 274 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 35 #