data_4CHP # _model_server_result.job_id G6Un_qGzVoRsQ8kjw4AFdg _model_server_result.datetime_utc '2024-11-22 05:16:56' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4chp # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"Q","auth_seq_id":1216}' # _entry.id 4CHP # _exptl.entry_id 4CHP _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 311.289 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '5-[(2-oxo-2,3-dihydro-1H-indol-1-yl)methyl]-1,3-benzodioxole-4-carboxylic acid' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4CHP _cell.length_a 71.488 _cell.length_b 71.488 _cell.length_c 66.819 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4CHP _symmetry.cell_setting ? _symmetry.Int_Tables_number 144 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 31' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 I N N ? 5 J N N ? 5 Q N N ? 5 R N N # _chem_comp.formula 'C17 H13 N O5' _chem_comp.formula_weight 311.289 _chem_comp.id IMV _chem_comp.mon_nstd_flag . _chem_comp.name '5-[(2-oxo-2,3-dihydro-1H-indol-1-yl)methyl]-1,3-benzodioxole-4-carboxylic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C2 IMV sing 188 n n C2 O3 IMV doub 189 n n C2 C4 IMV sing 190 n n C4 C5 IMV doub 191 n y C4 C23 IMV sing 192 n y C5 C6 IMV sing 193 n n C5 C17 IMV sing 194 n y C6 N7 IMV sing 195 n n N7 C8 IMV sing 196 n n N7 C16 IMV sing 197 n n C8 O9 IMV doub 198 n n C8 C10 IMV sing 199 n n C10 C11 IMV sing 200 n n C11 C12 IMV doub 201 n y C11 C16 IMV sing 202 n y C12 C13 IMV sing 203 n y C13 C14 IMV doub 204 n y C14 C15 IMV sing 205 n y C15 C16 IMV doub 206 n y C17 C18 IMV doub 207 n y C18 C19 IMV sing 208 n y C19 O20 IMV sing 209 n n C19 C23 IMV doub 210 n y O20 C21 IMV sing 211 n n C21 O22 IMV sing 212 n n O22 C23 IMV sing 213 n n C6 H6 IMV sing 214 n n C6 H6A IMV sing 215 n n C10 H10 IMV sing 216 n n C10 H10A IMV sing 217 n n C12 H12 IMV sing 218 n n C13 H13 IMV sing 219 n n C14 H14 IMV sing 220 n n C15 H15 IMV sing 221 n n C17 H17 IMV sing 222 n n C18 H18 IMV sing 223 n n C21 H21 IMV sing 224 n n C21 H21A IMV sing 225 n n O1 H1 IMV sing 226 n n # _atom_sites.entry_id 4CHP _atom_sites.fract_transf_matrix[1][1] 0.013988 _atom_sites.fract_transf_matrix[1][2] 0.008076 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016152 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014966 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 SO4 A 1 1210 1210 SO4 SO4 . D 2 SO4 A 1 1211 1211 SO4 SO4 . E 2 SO4 A 1 1212 1212 SO4 SO4 . F 3 ACT A 1 1213 1213 ACT ACT . G 4 EDO A 1 1214 1214 EDO EDO . H 4 EDO A 1 1215 1215 EDO EDO . I 5 IMV A 1 1216 1216 IMV IMV . J 5 IMV A 1 1217 1217 IMV IMV . K 2 SO4 B 1 1210 1210 SO4 SO4 . L 2 SO4 B 1 1211 1211 SO4 SO4 . M 2 SO4 B 1 1212 1212 SO4 SO4 . N 3 ACT B 1 1213 1213 ACT ACT . O 4 EDO B 1 1214 1214 EDO EDO . P 4 EDO B 1 1215 1215 EDO EDO . Q 5 IMV B 1 1216 1216 IMV IMV . R 5 IMV B 1 1217 1217 IMV IMV . S 6 HOH A 1 2001 2001 HOH HOH . S 6 HOH A 2 2002 2002 HOH HOH . S 6 HOH A 3 2003 2003 HOH HOH . S 6 HOH A 4 2004 2004 HOH HOH . S 6 HOH A 5 2005 2005 HOH HOH . S 6 HOH A 6 2006 2006 HOH HOH . S 6 HOH A 7 2007 2007 HOH HOH . S 6 HOH A 8 2008 2008 HOH HOH . S 6 HOH A 9 2009 2009 HOH HOH . S 6 HOH A 10 2010 2010 HOH HOH . S 6 HOH A 11 2011 2011 HOH HOH . S 6 HOH A 12 2012 2012 HOH HOH . S 6 HOH A 13 2013 2013 HOH HOH . S 6 HOH A 14 2014 2014 HOH HOH . S 6 HOH A 15 2015 2015 HOH HOH . S 6 HOH A 16 2016 2016 HOH HOH . S 6 HOH A 17 2017 2017 HOH HOH . S 6 HOH A 18 2018 2018 HOH HOH . S 6 HOH A 19 2019 2019 HOH HOH . S 6 HOH A 20 2020 2020 HOH HOH . S 6 HOH A 21 2021 2021 HOH HOH . S 6 HOH A 22 2022 2022 HOH HOH . S 6 HOH A 23 2023 2023 HOH HOH . S 6 HOH A 24 2024 2024 HOH HOH . S 6 HOH A 25 2025 2025 HOH HOH . S 6 HOH A 26 2026 2026 HOH HOH . S 6 HOH A 27 2027 2027 HOH HOH . S 6 HOH A 28 2028 2028 HOH HOH . S 6 HOH A 29 2029 2029 HOH HOH . S 6 HOH A 30 2030 2030 HOH HOH . S 6 HOH A 31 2031 2031 HOH HOH . S 6 HOH A 32 2032 2032 HOH HOH . S 6 HOH A 33 2033 2033 HOH HOH . S 6 HOH A 34 2034 2034 HOH HOH . S 6 HOH A 35 2035 2035 HOH HOH . S 6 HOH A 36 2036 2036 HOH HOH . S 6 HOH A 37 2037 2037 HOH HOH . S 6 HOH A 38 2038 2038 HOH HOH . S 6 HOH A 39 2039 2039 HOH HOH . S 6 HOH A 40 2040 2040 HOH HOH . S 6 HOH A 41 2041 2041 HOH HOH . S 6 HOH A 42 2042 2042 HOH HOH . S 6 HOH A 43 2043 2043 HOH HOH . S 6 HOH A 44 2044 2044 HOH HOH . S 6 HOH A 45 2045 2045 HOH HOH . S 6 HOH A 46 2046 2046 HOH HOH . S 6 HOH A 47 2047 2047 HOH HOH . S 6 HOH A 48 2048 2048 HOH HOH . S 6 HOH A 49 2049 2049 HOH HOH . S 6 HOH A 50 2050 2050 HOH HOH . S 6 HOH A 51 2051 2051 HOH HOH . S 6 HOH A 52 2052 2052 HOH HOH . S 6 HOH A 53 2053 2053 HOH HOH . S 6 HOH A 54 2054 2054 HOH HOH . S 6 HOH A 55 2055 2055 HOH HOH . S 6 HOH A 56 2056 2056 HOH HOH . S 6 HOH A 57 2057 2057 HOH HOH . S 6 HOH A 58 2058 2058 HOH HOH . S 6 HOH A 59 2059 2059 HOH HOH . S 6 HOH A 60 2060 2060 HOH HOH . S 6 HOH A 61 2061 2061 HOH HOH . S 6 HOH A 62 2062 2062 HOH HOH . S 6 HOH A 63 2063 2063 HOH HOH . S 6 HOH A 64 2064 2064 HOH HOH . S 6 HOH A 65 2065 2065 HOH HOH . S 6 HOH A 66 2066 2066 HOH HOH . T 6 HOH B 1 2001 2001 HOH HOH . T 6 HOH B 2 2002 2002 HOH HOH . T 6 HOH B 3 2003 2003 HOH HOH . T 6 HOH B 4 2004 2004 HOH HOH . T 6 HOH B 5 2005 2005 HOH HOH . T 6 HOH B 6 2006 2006 HOH HOH . T 6 HOH B 7 2007 2007 HOH HOH . T 6 HOH B 8 2008 2008 HOH HOH . T 6 HOH B 9 2009 2009 HOH HOH . T 6 HOH B 10 2010 2010 HOH HOH . T 6 HOH B 11 2011 2011 HOH HOH . T 6 HOH B 12 2012 2012 HOH HOH . T 6 HOH B 13 2013 2013 HOH HOH . T 6 HOH B 14 2014 2014 HOH HOH . T 6 HOH B 15 2015 2015 HOH HOH . T 6 HOH B 16 2016 2016 HOH HOH . T 6 HOH B 17 2017 2017 HOH HOH . T 6 HOH B 18 2018 2018 HOH HOH . T 6 HOH B 19 2019 2019 HOH HOH . T 6 HOH B 20 2020 2020 HOH HOH . T 6 HOH B 21 2021 2021 HOH HOH . T 6 HOH B 22 2022 2022 HOH HOH . T 6 HOH B 23 2023 2023 HOH HOH . T 6 HOH B 24 2024 2024 HOH HOH . T 6 HOH B 25 2025 2025 HOH HOH . T 6 HOH B 26 2026 2026 HOH HOH . T 6 HOH B 27 2027 2027 HOH HOH . T 6 HOH B 28 2028 2028 HOH HOH . T 6 HOH B 29 2029 2029 HOH HOH . T 6 HOH B 30 2030 2030 HOH HOH . T 6 HOH B 31 2031 2031 HOH HOH . T 6 HOH B 32 2032 2032 HOH HOH . T 6 HOH B 33 2033 2033 HOH HOH . T 6 HOH B 34 2034 2034 HOH HOH . T 6 HOH B 35 2035 2035 HOH HOH . T 6 HOH B 36 2036 2036 HOH HOH . T 6 HOH B 37 2037 2037 HOH HOH . T 6 HOH B 38 2038 2038 HOH HOH . T 6 HOH B 39 2039 2039 HOH HOH . T 6 HOH B 40 2040 2040 HOH HOH . T 6 HOH B 41 2041 2041 HOH HOH . T 6 HOH B 42 2042 2042 HOH HOH . T 6 HOH B 43 2043 2043 HOH HOH . T 6 HOH B 44 2044 2044 HOH HOH . T 6 HOH B 45 2045 2045 HOH HOH . T 6 HOH B 46 2046 2046 HOH HOH . T 6 HOH B 47 2047 2047 HOH HOH . T 6 HOH B 48 2048 2048 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 IMV . . . Q 5 31.949 -35.571 -14.174 0.95 19.45 ? O1 IMV 1216 B 1 HETATM 2 C C2 IMV . . . Q 5 32.95 -34.914 -13.762 0.95 19.9 ? C2 IMV 1216 B 1 HETATM 3 O O3 IMV . . . Q 5 34.053 -34.827 -14.372 0.95 19.8 ? O3 IMV 1216 B 1 HETATM 4 C C4 IMV . . . Q 5 32.785 -34.183 -12.472 0.95 19.48 ? C4 IMV 1216 B 1 HETATM 5 C C5 IMV . . . Q 5 33.33 -32.925 -12.243 0.95 20.01 ? C5 IMV 1216 B 1 HETATM 6 C C6 IMV . . . Q 5 34.144 -32.241 -13.306 0.95 20.49 ? C6 IMV 1216 B 1 HETATM 7 N N7 IMV . . . Q 5 34.455 -30.865 -13.007 0.95 19.99 ? N7 IMV 1216 B 1 HETATM 8 C C8 IMV . . . Q 5 35.62 -30.424 -12.422 0.95 21.16 ? C8 IMV 1216 B 1 HETATM 9 O O9 IMV . . . Q 5 36.571 -31.087 -12.035 0.95 22.78 ? O9 IMV 1216 B 1 HETATM 10 C C10 IMV . . . Q 5 35.523 -28.933 -12.306 0.95 20.94 ? C10 IMV 1216 B 1 HETATM 11 C C11 IMV . . . Q 5 34.212 -28.651 -12.936 0.95 20.23 ? C11 IMV 1216 B 1 HETATM 12 C C12 IMV . . . Q 5 33.603 -27.439 -13.137 0.95 19.64 ? C12 IMV 1216 B 1 HETATM 13 C C13 IMV . . . Q 5 32.369 -27.43 -13.75 0.95 20.25 ? C13 IMV 1216 B 1 HETATM 14 C C14 IMV . . . Q 5 31.766 -28.607 -14.153 0.95 19.67 ? C14 IMV 1216 B 1 HETATM 15 C C15 IMV . . . Q 5 32.386 -29.819 -13.944 0.95 19.48 ? C15 IMV 1216 B 1 HETATM 16 C C16 IMV . . . Q 5 33.614 -29.809 -13.333 0.95 19.67 ? C16 IMV 1216 B 1 HETATM 17 C C17 IMV . . . Q 5 33.136 -32.288 -11.026 0.95 19.84 ? C17 IMV 1216 B 1 HETATM 18 C C18 IMV . . . Q 5 32.404 -32.875 -10.017 0.95 20.05 ? C18 IMV 1216 B 1 HETATM 19 C C19 IMV . . . Q 5 31.878 -34.117 -10.258 0.95 19.21 ? C19 IMV 1216 B 1 HETATM 20 O O20 IMV . . . Q 5 31.136 -34.842 -9.372 0.95 19.47 ? O20 IMV 1216 B 1 HETATM 21 C C21 IMV . . . Q 5 30.764 -35.943 -10.203 0.95 19.4 ? C21 IMV 1216 B 1 HETATM 22 O O22 IMV . . . Q 5 31.441 -35.975 -11.464 0.95 20.45 ? O22 IMV 1216 B 1 HETATM 23 C C23 IMV . . . Q 5 32.061 -34.749 -11.445 0.95 18.98 ? C23 IMV 1216 B 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 325 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 23 #