data_4CHY # _model_server_result.job_id TBBz4hMhSnhMECLQ7z3CCA _model_server_result.datetime_utc '2024-11-22 05:39:27' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4chy # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":1217}' # _entry.id 4CHY # _exptl.entry_id 4CHY _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 295.289 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '5-(1H-indol-3-ylmethyl)-1,3-benzodioxole-4-carboxylic acid' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4CHY _cell.length_a 71.235 _cell.length_b 71.235 _cell.length_c 67.68 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4CHY _symmetry.cell_setting ? _symmetry.Int_Tables_number 144 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 31' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 J N N ? 5 K N N ? 5 P N N ? 5 Q N N # _chem_comp.formula 'C17 H13 N O4' _chem_comp.formula_weight 295.289 _chem_comp.id C5Q _chem_comp.mon_nstd_flag . _chem_comp.name '5-(1H-indol-3-ylmethyl)-1,3-benzodioxole-4-carboxylic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C3 C1 C5Q doub 77 n y C1 C2 C5Q sing 78 n y C1 H1 C5Q sing 79 n n C2 C5 C5Q doub 80 n y C2 H2 C5Q sing 81 n n C3 C7 C5Q sing 82 n y C3 H3 C5Q sing 83 n n C6 C4 C5Q doub 84 n y C4 C8 C5Q sing 85 n y C4 H4 C5Q sing 86 n n C10 C5 C5Q sing 87 n y C5 H5 C5Q sing 88 n n C11 C6 C5Q sing 89 n y C6 H6 C5Q sing 90 n n C14 C7 C5Q sing 91 n y C7 C10 C5Q doub 92 n y C9 C8 C5Q doub 93 n y C8 C15 C5Q sing 94 n n C12 C9 C5Q sing 95 n y C9 C16 C5Q sing 96 n n N18 C10 C5Q sing 97 n y O21 C11 C5Q sing 98 n n C11 C12 C5Q doub 99 n y O22 C12 C5Q sing 100 n n C14 C13 C5Q doub 101 n y C13 N18 C5Q sing 102 n y C13 H13 C5Q sing 103 n n C15 C14 C5Q sing 104 n n C15 H15 C5Q sing 105 n n C15 H15A C5Q sing 106 n n O20 C16 C5Q doub 107 n n C16 O19 C5Q sing 108 n n C17 O21 C5Q sing 109 n n C17 O22 C5Q sing 110 n n C17 H17 C5Q sing 111 n n C17 H17A C5Q sing 112 n n O19 HO19 C5Q sing 113 n n N18 HN18 C5Q sing 114 n n # _atom_sites.entry_id 4CHY _atom_sites.fract_transf_matrix[1][1] 0.014038 _atom_sites.fract_transf_matrix[1][2] 0.008105 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01621 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014775 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 SO4 A 1 1210 1210 SO4 SO4 . D 2 SO4 A 1 1211 1211 SO4 SO4 . E 2 SO4 A 1 1212 1212 SO4 SO4 . F 3 ACY A 1 1213 1213 ACY ACY . G 3 ACY A 1 1214 1214 ACY ACY . H 3 ACY A 1 1215 1215 ACY ACY . I 4 EDO A 1 1216 1216 EDO EDO . J 5 C5Q A 1 1217 1217 C5Q C5Q . K 5 C5Q A 1 1218 1218 C5Q C5Q . L 2 SO4 B 1 1210 1210 SO4 SO4 . M 2 SO4 B 1 1211 1211 SO4 SO4 . N 2 SO4 B 1 1212 1212 SO4 SO4 . O 3 ACY B 1 1213 1213 ACY ACY . P 5 C5Q B 1 1214 1214 C5Q C5Q . Q 5 C5Q B 1 1215 1215 C5Q C5Q . R 6 HOH A 1 2001 2001 HOH HOH . R 6 HOH A 2 2002 2002 HOH HOH . R 6 HOH A 3 2003 2003 HOH HOH . R 6 HOH A 4 2004 2004 HOH HOH . R 6 HOH A 5 2005 2005 HOH HOH . R 6 HOH A 6 2006 2006 HOH HOH . R 6 HOH A 7 2007 2007 HOH HOH . R 6 HOH A 8 2008 2008 HOH HOH . R 6 HOH A 9 2009 2009 HOH HOH . R 6 HOH A 10 2010 2010 HOH HOH . R 6 HOH A 11 2011 2011 HOH HOH . R 6 HOH A 12 2012 2012 HOH HOH . R 6 HOH A 13 2013 2013 HOH HOH . R 6 HOH A 14 2014 2014 HOH HOH . R 6 HOH A 15 2015 2015 HOH HOH . R 6 HOH A 16 2016 2016 HOH HOH . R 6 HOH A 17 2017 2017 HOH HOH . R 6 HOH A 18 2018 2018 HOH HOH . R 6 HOH A 19 2019 2019 HOH HOH . R 6 HOH A 20 2020 2020 HOH HOH . R 6 HOH A 21 2021 2021 HOH HOH . R 6 HOH A 22 2022 2022 HOH HOH . R 6 HOH A 23 2023 2023 HOH HOH . R 6 HOH A 24 2024 2024 HOH HOH . R 6 HOH A 25 2025 2025 HOH HOH . R 6 HOH A 26 2026 2026 HOH HOH . R 6 HOH A 27 2027 2027 HOH HOH . R 6 HOH A 28 2028 2028 HOH HOH . R 6 HOH A 29 2029 2029 HOH HOH . R 6 HOH A 30 2030 2030 HOH HOH . R 6 HOH A 31 2031 2031 HOH HOH . R 6 HOH A 32 2032 2032 HOH HOH . R 6 HOH A 33 2033 2033 HOH HOH . R 6 HOH A 34 2034 2034 HOH HOH . R 6 HOH A 35 2035 2035 HOH HOH . R 6 HOH A 36 2036 2036 HOH HOH . R 6 HOH A 37 2037 2037 HOH HOH . R 6 HOH A 38 2038 2038 HOH HOH . R 6 HOH A 39 2039 2039 HOH HOH . R 6 HOH A 40 2040 2040 HOH HOH . R 6 HOH A 41 2041 2041 HOH HOH . R 6 HOH A 42 2042 2042 HOH HOH . R 6 HOH A 43 2043 2043 HOH HOH . R 6 HOH A 44 2044 2044 HOH HOH . R 6 HOH A 45 2045 2045 HOH HOH . R 6 HOH A 46 2046 2046 HOH HOH . R 6 HOH A 47 2047 2047 HOH HOH . R 6 HOH A 48 2048 2048 HOH HOH . R 6 HOH A 49 2049 2049 HOH HOH . R 6 HOH A 50 2050 2050 HOH HOH . R 6 HOH A 51 2051 2051 HOH HOH . R 6 HOH A 52 2052 2052 HOH HOH . R 6 HOH A 53 2053 2053 HOH HOH . R 6 HOH A 54 2054 2054 HOH HOH . R 6 HOH A 55 2055 2055 HOH HOH . R 6 HOH A 56 2056 2056 HOH HOH . R 6 HOH A 57 2057 2057 HOH HOH . R 6 HOH A 58 2058 2058 HOH HOH . R 6 HOH A 59 2059 2059 HOH HOH . R 6 HOH A 60 2060 2060 HOH HOH . R 6 HOH A 61 2061 2061 HOH HOH . R 6 HOH A 62 2062 2062 HOH HOH . R 6 HOH A 63 2063 2063 HOH HOH . R 6 HOH A 64 2064 2064 HOH HOH . R 6 HOH A 65 2065 2065 HOH HOH . R 6 HOH A 66 2066 2066 HOH HOH . R 6 HOH A 67 2067 2067 HOH HOH . R 6 HOH A 68 2068 2068 HOH HOH . R 6 HOH A 69 2069 2069 HOH HOH . R 6 HOH A 70 2070 2070 HOH HOH . R 6 HOH A 71 2071 2071 HOH HOH . R 6 HOH A 72 2072 2072 HOH HOH . R 6 HOH A 73 2073 2073 HOH HOH . R 6 HOH A 74 2074 2074 HOH HOH . S 6 HOH B 1 2001 2001 HOH HOH . S 6 HOH B 2 2002 2002 HOH HOH . S 6 HOH B 3 2003 2003 HOH HOH . S 6 HOH B 4 2004 2004 HOH HOH . S 6 HOH B 5 2005 2005 HOH HOH . S 6 HOH B 6 2006 2006 HOH HOH . S 6 HOH B 7 2007 2007 HOH HOH . S 6 HOH B 8 2008 2008 HOH HOH . S 6 HOH B 9 2009 2009 HOH HOH . S 6 HOH B 10 2010 2010 HOH HOH . S 6 HOH B 11 2011 2011 HOH HOH . S 6 HOH B 12 2012 2012 HOH HOH . S 6 HOH B 13 2013 2013 HOH HOH . S 6 HOH B 14 2014 2014 HOH HOH . S 6 HOH B 15 2015 2015 HOH HOH . S 6 HOH B 16 2016 2016 HOH HOH . S 6 HOH B 17 2017 2017 HOH HOH . S 6 HOH B 18 2018 2018 HOH HOH . S 6 HOH B 19 2019 2019 HOH HOH . S 6 HOH B 20 2020 2020 HOH HOH . S 6 HOH B 21 2021 2021 HOH HOH . S 6 HOH B 22 2022 2022 HOH HOH . S 6 HOH B 23 2023 2023 HOH HOH . S 6 HOH B 24 2024 2024 HOH HOH . S 6 HOH B 25 2025 2025 HOH HOH . S 6 HOH B 26 2026 2026 HOH HOH . S 6 HOH B 27 2027 2027 HOH HOH . S 6 HOH B 28 2028 2028 HOH HOH . S 6 HOH B 29 2029 2029 HOH HOH . S 6 HOH B 30 2030 2030 HOH HOH . S 6 HOH B 31 2031 2031 HOH HOH . S 6 HOH B 32 2032 2032 HOH HOH . S 6 HOH B 33 2033 2033 HOH HOH . S 6 HOH B 34 2034 2034 HOH HOH . S 6 HOH B 35 2035 2035 HOH HOH . S 6 HOH B 36 2036 2036 HOH HOH . S 6 HOH B 37 2037 2037 HOH HOH . S 6 HOH B 38 2038 2038 HOH HOH . S 6 HOH B 39 2039 2039 HOH HOH . S 6 HOH B 40 2040 2040 HOH HOH . S 6 HOH B 41 2041 2041 HOH HOH . S 6 HOH B 42 2042 2042 HOH HOH . S 6 HOH B 43 2043 2043 HOH HOH . S 6 HOH B 44 2044 2044 HOH HOH . S 6 HOH B 45 2045 2045 HOH HOH . S 6 HOH B 46 2046 2046 HOH HOH . S 6 HOH B 47 2047 2047 HOH HOH . S 6 HOH B 48 2048 2048 HOH HOH . S 6 HOH B 49 2049 2049 HOH HOH . S 6 HOH B 50 2050 2050 HOH HOH . S 6 HOH B 51 2051 2051 HOH HOH . S 6 HOH B 52 2052 2052 HOH HOH . S 6 HOH B 53 2053 2053 HOH HOH . S 6 HOH B 54 2054 2054 HOH HOH . S 6 HOH B 55 2055 2055 HOH HOH . S 6 HOH B 56 2056 2056 HOH HOH . S 6 HOH B 57 2057 2057 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 C5Q . . . J 5 -19.127 12.72 3.211 0.9 60.45 ? C1 C5Q 1217 A 1 HETATM 2 C C2 C5Q . . . J 5 -19.698 11.704 2.482 0.9 62.23 ? C2 C5Q 1217 A 1 HETATM 3 C C3 C5Q . . . J 5 -18.152 13.543 2.692 0.9 58.98 ? C3 C5Q 1217 A 1 HETATM 4 C C4 C5Q . . . J 5 -15.671 17.122 1.953 0.9 38.4 ? C4 C5Q 1217 A 1 HETATM 5 C C5 C5Q . . . J 5 -19.317 11.454 1.185 0.9 61.54 ? C5 C5Q 1217 A 1 HETATM 6 C C6 C5Q . . . J 5 -15.951 18.416 2.32 0.9 37.02 ? C6 C5Q 1217 A 1 HETATM 7 C C7 C5Q . . . J 5 -17.754 13.316 1.389 0.9 58.42 ? C7 C5Q 1217 A 1 HETATM 8 C C8 C5Q . . . J 5 -16.403 16.448 0.993 0.9 41.51 ? C8 C5Q 1217 A 1 HETATM 9 C C9 C5Q . . . J 5 -17.452 17.106 0.36 0.9 38.92 ? C9 C5Q 1217 A 1 HETATM 10 C C10 C5Q . . . J 5 -18.345 12.283 0.683 0.9 60.72 ? C10 C5Q 1217 A 1 HETATM 11 C C11 C5Q . . . J 5 -16.995 19.041 1.695 0.9 36.06 ? C11 C5Q 1217 A 1 HETATM 12 C C12 C5Q . . . J 5 -17.722 18.403 0.744 0.9 37.36 ? C12 C5Q 1217 A 1 HETATM 13 C C13 C5Q . . . J 5 -16.857 13.244 -0.667 0.9 58.45 ? C13 C5Q 1217 A 1 HETATM 14 C C14 C5Q . . . J 5 -16.815 13.935 0.521 0.9 53.92 ? C14 C5Q 1217 A 1 HETATM 15 C C15 C5Q . . . J 5 -15.886 15.056 0.754 0.9 46.72 ? C15 C5Q 1217 A 1 HETATM 16 C C16 C5Q . . . J 5 -18.304 16.512 -0.682 0.9 37.87 ? C16 C5Q 1217 A 1 HETATM 17 C C17 C5Q . . . J 5 -18.456 20.422 0.959 0.9 35.79 ? C17 C5Q 1217 A 1 HETATM 18 N N18 C5Q . . . J 5 -17.79 12.256 -0.562 0.9 60.6 ? N18 C5Q 1217 A 1 HETATM 19 O O19 C5Q . . . J 5 -17.865 16.55 -1.863 0.9 34.84 ? O19 C5Q 1217 A 1 HETATM 20 O O20 C5Q . . . J 5 -19.405 16.044 -0.29 0.9 37.3 ? O20 C5Q 1217 A 1 HETATM 21 O O21 C5Q . . . J 5 -17.42 20.326 1.928 0.9 36.47 ? O21 C5Q 1217 A 1 HETATM 22 O O22 C5Q . . . J 5 -18.713 19.216 0.248 0.9 36.88 ? O22 C5Q 1217 A 1 # _model_server_stats.io_time_ms 5 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 14 _model_server_stats.query_time_ms 303 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 22 #