data_4CID # _model_server_result.job_id GLntZC5W2YSn4sZicySEbw _model_server_result.datetime_utc '2025-01-02 23:27:36' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4cid # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":1541}' # _entry.id 4CID # _exptl.entry_id 4CID _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 106.05 _cell.angle_gamma 90 _cell.entry_id 4CID _cell.length_a 99.851 _cell.length_b 134.653 _cell.length_c 56.068 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4CID _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_554 -x,y,-z-1 -1 0 0 0 1 0 0 0 -1 15.501463 0 -53.882514 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C MSE 8 A MSE 1 1_555 A N PHE 9 A PHE 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale2 A C TRP 11 A TRP 4 1_555 A N MSE 12 A MSE 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale3 A C MSE 12 A MSE 5 1_555 A N LYS 13 A LYS 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale4 A C PRO 66 A PRO 59 1_555 A N MSE 67 A MSE 60 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale5 A C MSE 67 A MSE 60 1_555 A N VAL 68 A VAL 61 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.338 ? covale ? covale6 A C VAL 107 A VAL 100 1_555 A N MSE 108 A MSE 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale7 A C MSE 108 A MSE 101 1_555 A N HIS 109 A HIS 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale8 A C PHE 143 A PHE 136 1_555 A N MSE 144 A MSE 137 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale9 A C MSE 144 A MSE 137 1_555 A N CYS 145 A CYS 138 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale10 A C ASP 229 A ASP 222 1_555 A N MSE 230 A MSE 223 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale11 A C MSE 230 A MSE 223 1_555 A N VAL 231 A VAL 224 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale12 A C LEU 236 A LEU 229 1_555 A N MSE 237 A MSE 230 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale13 A C MSE 237 A MSE 230 1_555 A N ARG 238 A ARG 231 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale14 A C LEU 243 A LEU 236 1_555 A N MSE 244 A MSE 237 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale15 A C MSE 244 A MSE 237 1_555 A N TRP 245 A TRP 238 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale16 A C GLU 324 A GLU 317 1_555 A N MSE 325 A MSE 318 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale17 A C MSE 325 A MSE 318 1_555 A N PRO 326 A PRO 319 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.352 ? covale ? covale18 A C LYS 365 A LYS 358 1_555 A N MSE 366 A MSE 359 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale19 A C MSE 366 A MSE 359 1_555 A N GLN 367 A GLN 360 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale20 A C LEU 370 A LEU 363 1_555 A N MSE 371 A MSE 364 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale21 A C MSE 371 A MSE 364 1_555 A N ALA 372 A ALA 365 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale22 A C ASP 391 A ASP 384 1_555 A N MSE 392 A MSE 385 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale23 A C MSE 392 A MSE 385 1_555 A N LEU 393 A LEU 386 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? covale ? covale24 A C LEU 400 A LEU 393 1_555 A N MSE 401 A MSE 394 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale25 A C MSE 401 A MSE 394 1_555 A N PRO 402 A PRO 395 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.351 ? covale ? covale26 A C ARG 425 A ARG 418 1_555 A N MSE 426 A MSE 419 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale27 A C MSE 426 A MSE 419 1_555 A N GLY 427 A GLY 420 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale28 A C TRP 482 A TRP 475 1_555 A N MSE 483 A MSE 476 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale29 A C MSE 483 A MSE 476 1_555 A N VAL 484 A VAL 477 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale30 A C GLY 506 A GLY 499 1_555 A N MSE 507 A MSE 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale31 A C MSE 507 A MSE 500 1_555 A N LEU 508 A LEU 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? metalc ? metalc1 A OG1 THR 79 A THR 72 1_555 D MG MG . A MG 1541 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.119 ? metalc ? metalc2 A OG1 THR 101 A THR 94 1_555 D MG MG . A MG 1541 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.525 ? metalc ? metalc3 A OD1 ASP 501 A ASP 494 1_555 B CA CA . A CA 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.627 ? metalc ? metalc4 A OD1 ASP 503 A ASP 496 1_555 B CA CA . A CA 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.303 ? metalc ? metalc5 A OD1 ASP 505 A ASP 498 1_555 B CA CA . A CA 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.276 ? metalc ? metalc6 A O MSE 507 A MSE 500 1_555 B CA CA . A CA 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.196 ? metalc ? metalc7 A OE2 GLU 512 A GLU 505 1_555 B CA CA . A CA 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.908 ? metalc ? metalc8 A OE1 GLU 512 A GLU 505 1_555 B CA CA . A CA 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.276 ? metalc ? metalc9 C O3G ANP . A ANP 1540 1_555 D MG MG . A MG 1541 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.88 ? metalc ? metalc10 C O2B ANP . A ANP 1540 1_555 D MG MG . A MG 1541 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.195 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4CID _atom_sites.fract_transf_matrix[1][1] 0.010015 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002881 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007426 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.018559 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CA A 1 701 701 CA CA . C 3 ANP A 1 1540 1540 ANP ANP . D 4 MG A 1 1541 1541 MG MG . E 5 HOH A 1 2001 2001 HOH HOH . E 5 HOH A 2 2002 2002 HOH HOH . E 5 HOH A 3 2003 2003 HOH HOH . E 5 HOH A 4 2004 2004 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 4 _atom_site.Cartn_x 13.902 _atom_site.Cartn_y -53.654 _atom_site.Cartn_z -1.371 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 59.46 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 1541 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 315 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 1 #