data_4CIE # _model_server_result.job_id -JJCXuF70t4fV9XYbjdR7w _model_server_result.datetime_utc '2024-11-22 06:51:03' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4cie # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":1215}' # _entry.id 4CIE # _exptl.entry_id 4CIE _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 422.474 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '5-[(E)-[(2S)-2-(6-azanylhexanoylamino)-2,3-dihydroinden-1-ylidene]methyl]-1,3-benzodioxole-4-carboxylic acid' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4CIE _cell.length_a 71.244 _cell.length_b 71.244 _cell.length_c 66.943 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4CIE _symmetry.cell_setting ? _symmetry.Int_Tables_number 144 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 31' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 I N N ? 5 R N N # _chem_comp.formula 'C24 H26 N2 O5' _chem_comp.formula_weight 422.474 _chem_comp.id Y7N _chem_comp.mon_nstd_flag . _chem_comp.name '5-[(E)-[(2S)-2-(6-azanylhexanoylamino)-2,3-dihydroinden-1-ylidene]methyl]-1,3-benzodioxole-4-carboxylic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 Y7N sing 387 n y C1 C3 Y7N doub 388 n y C2 C5 Y7N doub 389 n y C3 C7 Y7N sing 390 n y C4 C6 Y7N sing 391 n y C4 C8 Y7N doub 392 n y C5 C10 Y7N sing 393 n y C6 C11 Y7N doub 394 n y C7 C10 Y7N doub 395 n y C7 C13 Y7N sing 396 n n C8 C9 Y7N sing 397 n y C8 C14 Y7N sing 398 n n C9 C12 Y7N doub 399 n y C9 C15 Y7N sing 400 n n C10 C17 Y7N sing 401 n n C11 C12 Y7N sing 402 n y C11 O29 Y7N sing 403 n n C12 O30 Y7N sing 404 n n C13 C14 Y7N doub 405 e n C13 C19 Y7N sing 406 n n C15 O31 Y7N doub 407 n n C15 O27 Y7N sing 408 n n C16 C20 Y7N sing 409 n n C16 N26 Y7N sing 410 n n C16 O28 Y7N doub 411 n n C17 C19 Y7N sing 412 n n C18 O29 Y7N sing 413 n n C18 O30 Y7N sing 414 n n C19 N26 Y7N sing 415 n n C20 C21 Y7N sing 416 n n C21 C22 Y7N sing 417 n n C22 C23 Y7N sing 418 n n C23 C24 Y7N sing 419 n n C24 N25 Y7N sing 420 n n C1 H1 Y7N sing 421 n n C2 H2 Y7N sing 422 n n C3 H3 Y7N sing 423 n n C5 H5 Y7N sing 424 n n C4 H4 Y7N sing 425 n n C6 H6 Y7N sing 426 n n C14 H14 Y7N sing 427 n n C17 H171 Y7N sing 428 n n C17 H172 Y7N sing 429 n n C19 H19 Y7N sing 430 n n O27 H27 Y7N sing 431 n n C20 H201 Y7N sing 432 n n C20 H202 Y7N sing 433 n n N26 H26 Y7N sing 434 n n C18 H181 Y7N sing 435 n n C18 H182 Y7N sing 436 n n C21 H211 Y7N sing 437 n n C21 H212 Y7N sing 438 n n C22 H221 Y7N sing 439 n n C22 H222 Y7N sing 440 n n C23 H231 Y7N sing 441 n n C23 H232 Y7N sing 442 n n C24 H241 Y7N sing 443 n n C24 H242 Y7N sing 444 n n N25 H251 Y7N sing 445 n n N25 H252 Y7N sing 446 n n # _atom_sites.entry_id 4CIE _atom_sites.fract_transf_matrix[1][1] 0.014036 _atom_sites.fract_transf_matrix[1][2] 0.008104 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016208 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014938 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 SO4 A 1 1209 1209 SO4 SO4 . D 2 SO4 A 1 1210 1210 SO4 SO4 . E 2 SO4 A 1 1211 1211 SO4 SO4 . F 2 SO4 A 1 1212 1212 SO4 SO4 . G 3 CL A 1 1213 1213 CL CL . H 4 ACY A 1 1214 1214 ACY ACY . I 5 Y7N A 1 1215 1215 Y7N Y7N . J 2 SO4 B 1 1209 1209 SO4 SO4 . K 2 SO4 B 1 1210 1210 SO4 SO4 . L 2 SO4 B 1 1211 1211 SO4 SO4 . M 2 SO4 B 1 1212 1212 SO4 SO4 . N 3 CL B 1 1213 1213 CL CL . O 4 ACY B 1 1214 1214 ACY ACY . P 4 ACY B 1 1215 1215 ACY ACY . Q 4 ACY B 1 1216 1216 ACY ACY . R 5 Y7N B 1 1217 1217 Y7N Y7N . S 6 HOH A 1 2001 2001 HOH HOH . S 6 HOH A 2 2002 2002 HOH HOH . S 6 HOH A 3 2003 2003 HOH HOH . S 6 HOH A 4 2004 2004 HOH HOH . S 6 HOH A 5 2005 2005 HOH HOH . S 6 HOH A 6 2006 2006 HOH HOH . S 6 HOH A 7 2007 2007 HOH HOH . S 6 HOH A 8 2008 2008 HOH HOH . S 6 HOH A 9 2009 2009 HOH HOH . S 6 HOH A 10 2010 2010 HOH HOH . S 6 HOH A 11 2011 2011 HOH HOH . S 6 HOH A 12 2012 2012 HOH HOH . S 6 HOH A 13 2013 2013 HOH HOH . S 6 HOH A 14 2014 2014 HOH HOH . S 6 HOH A 15 2015 2015 HOH HOH . S 6 HOH A 16 2016 2016 HOH HOH . S 6 HOH A 17 2017 2017 HOH HOH . S 6 HOH A 18 2018 2018 HOH HOH . S 6 HOH A 19 2019 2019 HOH HOH . S 6 HOH A 20 2020 2020 HOH HOH . S 6 HOH A 21 2021 2021 HOH HOH . S 6 HOH A 22 2022 2022 HOH HOH . S 6 HOH A 23 2023 2023 HOH HOH . S 6 HOH A 24 2024 2024 HOH HOH . S 6 HOH A 25 2025 2025 HOH HOH . S 6 HOH A 26 2026 2026 HOH HOH . S 6 HOH A 27 2027 2027 HOH HOH . S 6 HOH A 28 2028 2028 HOH HOH . S 6 HOH A 29 2029 2029 HOH HOH . S 6 HOH A 30 2030 2030 HOH HOH . S 6 HOH A 31 2031 2031 HOH HOH . S 6 HOH A 32 2032 2032 HOH HOH . S 6 HOH A 33 2033 2033 HOH HOH . S 6 HOH A 34 2034 2034 HOH HOH . S 6 HOH A 35 2035 2035 HOH HOH . S 6 HOH A 36 2036 2036 HOH HOH . S 6 HOH A 37 2037 2037 HOH HOH . S 6 HOH A 38 2038 2038 HOH HOH . S 6 HOH A 39 2039 2039 HOH HOH . S 6 HOH A 40 2040 2040 HOH HOH . S 6 HOH A 41 2041 2041 HOH HOH . S 6 HOH A 42 2042 2042 HOH HOH . S 6 HOH A 43 2043 2043 HOH HOH . S 6 HOH A 44 2044 2044 HOH HOH . S 6 HOH A 45 2045 2045 HOH HOH . S 6 HOH A 46 2046 2046 HOH HOH . S 6 HOH A 47 2047 2047 HOH HOH . S 6 HOH A 48 2048 2048 HOH HOH . S 6 HOH A 49 2049 2049 HOH HOH . S 6 HOH A 50 2050 2050 HOH HOH . S 6 HOH A 51 2051 2051 HOH HOH . S 6 HOH A 52 2052 2052 HOH HOH . S 6 HOH A 53 2053 2053 HOH HOH . S 6 HOH A 54 2054 2054 HOH HOH . S 6 HOH A 55 2055 2055 HOH HOH . S 6 HOH A 56 2056 2056 HOH HOH . S 6 HOH A 57 2057 2057 HOH HOH . S 6 HOH A 58 2058 2058 HOH HOH . S 6 HOH A 59 2059 2059 HOH HOH . S 6 HOH A 60 2060 2060 HOH HOH . S 6 HOH A 61 2061 2061 HOH HOH . S 6 HOH A 62 2062 2062 HOH HOH . S 6 HOH A 63 2063 2063 HOH HOH . S 6 HOH A 64 2064 2064 HOH HOH . S 6 HOH A 65 2065 2065 HOH HOH . S 6 HOH A 66 2066 2066 HOH HOH . S 6 HOH A 67 2067 2067 HOH HOH . S 6 HOH A 68 2068 2068 HOH HOH . S 6 HOH A 69 2069 2069 HOH HOH . S 6 HOH A 70 2070 2070 HOH HOH . S 6 HOH A 71 2071 2071 HOH HOH . S 6 HOH A 72 2072 2072 HOH HOH . S 6 HOH A 73 2073 2073 HOH HOH . S 6 HOH A 74 2074 2074 HOH HOH . S 6 HOH A 75 2075 2075 HOH HOH . S 6 HOH A 76 2076 2076 HOH HOH . S 6 HOH A 77 2077 2077 HOH HOH . S 6 HOH A 78 2078 2078 HOH HOH . S 6 HOH A 79 2079 2079 HOH HOH . S 6 HOH A 80 2080 2080 HOH HOH . T 6 HOH B 1 2001 2001 HOH HOH . T 6 HOH B 2 2002 2002 HOH HOH . T 6 HOH B 3 2003 2003 HOH HOH . T 6 HOH B 4 2004 2004 HOH HOH . T 6 HOH B 5 2005 2005 HOH HOH . T 6 HOH B 6 2006 2006 HOH HOH . T 6 HOH B 7 2007 2007 HOH HOH . T 6 HOH B 8 2008 2008 HOH HOH . T 6 HOH B 9 2009 2009 HOH HOH . T 6 HOH B 10 2010 2010 HOH HOH . T 6 HOH B 11 2011 2011 HOH HOH . T 6 HOH B 12 2012 2012 HOH HOH . T 6 HOH B 13 2013 2013 HOH HOH . T 6 HOH B 14 2014 2014 HOH HOH . T 6 HOH B 15 2015 2015 HOH HOH . T 6 HOH B 16 2016 2016 HOH HOH . T 6 HOH B 17 2017 2017 HOH HOH . T 6 HOH B 18 2018 2018 HOH HOH . T 6 HOH B 19 2019 2019 HOH HOH . T 6 HOH B 20 2020 2020 HOH HOH . T 6 HOH B 21 2021 2021 HOH HOH . T 6 HOH B 22 2022 2022 HOH HOH . T 6 HOH B 23 2023 2023 HOH HOH . T 6 HOH B 24 2024 2024 HOH HOH . T 6 HOH B 25 2025 2025 HOH HOH . T 6 HOH B 26 2026 2026 HOH HOH . T 6 HOH B 27 2027 2027 HOH HOH . T 6 HOH B 28 2028 2028 HOH HOH . T 6 HOH B 29 2029 2029 HOH HOH . T 6 HOH B 30 2030 2030 HOH HOH . T 6 HOH B 31 2031 2031 HOH HOH . T 6 HOH B 32 2032 2032 HOH HOH . T 6 HOH B 33 2033 2033 HOH HOH . T 6 HOH B 34 2034 2034 HOH HOH . T 6 HOH B 35 2035 2035 HOH HOH . T 6 HOH B 36 2036 2036 HOH HOH . T 6 HOH B 37 2037 2037 HOH HOH . T 6 HOH B 38 2038 2038 HOH HOH . T 6 HOH B 39 2039 2039 HOH HOH . T 6 HOH B 40 2040 2040 HOH HOH . T 6 HOH B 41 2041 2041 HOH HOH . T 6 HOH B 42 2042 2042 HOH HOH . T 6 HOH B 43 2043 2043 HOH HOH . T 6 HOH B 44 2044 2044 HOH HOH . T 6 HOH B 45 2045 2045 HOH HOH . T 6 HOH B 46 2046 2046 HOH HOH . T 6 HOH B 47 2047 2047 HOH HOH . T 6 HOH B 48 2048 2048 HOH HOH . T 6 HOH B 49 2049 2049 HOH HOH . T 6 HOH B 50 2050 2050 HOH HOH . T 6 HOH B 51 2051 2051 HOH HOH . T 6 HOH B 52 2052 2052 HOH HOH . T 6 HOH B 53 2053 2053 HOH HOH . T 6 HOH B 54 2054 2054 HOH HOH . T 6 HOH B 55 2055 2055 HOH HOH . T 6 HOH B 56 2056 2056 HOH HOH . T 6 HOH B 57 2057 2057 HOH HOH . T 6 HOH B 58 2058 2058 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 Y7N . . . I 5 -9.685 41.188 -0.989 1 25.21 ? C1 Y7N 1215 A 1 HETATM 2 C C2 Y7N . . . I 5 -8.686 40.666 -0.199 1 25.31 ? C2 Y7N 1215 A 1 HETATM 3 C C3 Y7N . . . I 5 -10.099 42.494 -0.843 1 26.43 ? C3 Y7N 1215 A 1 HETATM 4 C C4 Y7N . . . I 5 -11.407 44.972 -2.187 1 21.66 ? C4 Y7N 1215 A 1 HETATM 5 C C5 Y7N . . . I 5 -8.08 41.45 0.756 1 26.26 ? C5 Y7N 1215 A 1 HETATM 6 C C6 Y7N . . . I 5 -12.421 44.684 -3.077 1 21.41 ? C6 Y7N 1215 A 1 HETATM 7 C C7 Y7N . . . I 5 -9.494 43.275 0.116 1 26.93 ? C7 Y7N 1215 A 1 HETATM 8 C C8 Y7N . . . I 5 -11.684 45.267 -0.864 1 23.08 ? C8 Y7N 1215 A 1 HETATM 9 C C9 Y7N . . . I 5 -12.988 45.298 -0.403 1 22.09 ? C9 Y7N 1215 A 1 HETATM 10 C C10 Y7N . . . I 5 -8.497 42.75 0.891 1 27.48 ? C10 Y7N 1215 A 1 HETATM 11 C C11 Y7N . . . I 5 -13.706 44.712 -2.604 1 20.66 ? C11 Y7N 1215 A 1 HETATM 12 C C12 Y7N . . . I 5 -13.982 45.012 -1.308 1 21.29 ? C12 Y7N 1215 A 1 HETATM 13 C C13 Y7N . . . I 5 -9.688 44.668 0.483 1 28.16 ? C13 Y7N 1215 A 1 HETATM 14 C C14 Y7N . . . I 5 -10.587 45.562 0.044 1 25.99 ? C14 Y7N 1215 A 1 HETATM 15 C C15 Y7N . . . I 5 -13.338 45.612 1.001 1 22.45 ? C15 Y7N 1215 A 1 HETATM 16 C C16 Y7N . . . I 5 -8.65 47.13 2.625 1 38.8 ? C16 Y7N 1215 A 1 HETATM 17 C C17 Y7N . . . I 5 -7.947 43.725 1.862 1 28.97 ? C17 Y7N 1215 A 1 HETATM 18 C C18 Y7N . . . I 5 -15.789 44.402 -2.274 1 21.42 ? C18 Y7N 1215 A 1 HETATM 19 C C19 Y7N . . . I 5 -8.571 45.025 1.407 1 30.27 ? C19 Y7N 1215 A 1 HETATM 20 C C20 Y7N . . . I 5 -8.989 47.745 3.944 1 40.48 ? C20 Y7N 1215 A 1 HETATM 21 C C21 Y7N . . . I 5 -10.367 48.344 3.832 1 41.58 ? C21 Y7N 1215 A 1 HETATM 22 C C22 Y7N . . . I 5 -10.615 49.302 4.979 1 42.57 ? C22 Y7N 1215 A 1 HETATM 23 C C23 Y7N . . . I 5 -10.682 48.552 6.287 1 43.63 ? C23 Y7N 1215 A 1 HETATM 24 C C24 Y7N . . . I 5 -11.704 49.187 7.205 1 44.99 ? C24 Y7N 1215 A 1 HETATM 25 N N26 Y7N . . . I 5 -9.031 45.81 2.527 1 34.89 ? N26 Y7N 1215 A 1 HETATM 26 N N25 Y7N . . . I 5 -11.218 49.111 8.604 1 46.29 ? N25 Y7N 1215 A 1 HETATM 27 O O31 Y7N . . . I 5 -12.623 46.456 1.61 1 24.21 ? O31 Y7N 1215 A 1 HETATM 28 O O27 Y7N . . . I 5 -14.337 45.021 1.489 1 21.46 ? O27 Y7N 1215 A 1 HETATM 29 O O28 Y7N . . . I 5 -8.092 47.778 1.751 1 39.35 ? O28 Y7N 1215 A 1 HETATM 30 O O29 Y7N . . . I 5 -14.83 44.453 -3.334 1 21.45 ? O29 Y7N 1215 A 1 HETATM 31 O O30 Y7N . . . I 5 -15.326 44.979 -1.044 1 21.18 ? O30 Y7N 1215 A 1 # _model_server_stats.io_time_ms 4 _model_server_stats.parse_time_ms 5 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 260 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 31 #