data_4CIF # _model_server_result.job_id 7MKIqm_lznBcgTQlyPtDrA _model_server_result.datetime_utc '2024-11-22 05:33:19' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4cif # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":1216}' # _entry.id 4CIF # _exptl.entry_id 4CIF _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 448.511 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '2-methoxy-6-[[[2-[(4-methoxyphenyl)methylcarbamoyl]phenyl]methyl-methyl-amino]methyl]benzoic acid' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4CIF _cell.length_a 70.978 _cell.length_b 70.978 _cell.length_c 67.107 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4CIF _symmetry.cell_setting ? _symmetry.Int_Tables_number 144 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 31' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 I N N ? 5 Q N N # _chem_comp.formula 'C26 H28 N2 O5' _chem_comp.formula_weight 448.511 _chem_comp.id JDX _chem_comp.mon_nstd_flag . _chem_comp.name '2-methoxy-6-[[[2-[(4-methoxyphenyl)methylcarbamoyl]phenyl]methyl-methyl-amino]methyl]benzoic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C15 C16 JDX sing 179 n y C15 C14 JDX doub 180 n y C16 C17 JDX doub 181 n y C14 C13 JDX sing 182 n y C17 C18 JDX sing 183 n y C23 C24 JDX sing 184 n y C23 C22 JDX doub 185 n y C6 C7 JDX sing 186 n y C6 C5 JDX doub 187 n y C10 C9 JDX doub 188 n y C10 C5 JDX sing 189 n y C24 C25 JDX doub 190 n y C7 C8 JDX doub 191 n y C9 C8 JDX sing 192 n y C13 C18 JDX doub 193 n y C13 C2 JDX sing 194 n n C30 C22 JDX sing 195 n y C30 C29 JDX doub 196 n y C30 C31 JDX sing 197 n n C5 C4 JDX sing 198 n n C18 C19 JDX sing 199 n n C22 C21 JDX sing 200 n n C25 C29 JDX sing 201 n y C29 O28 JDX sing 202 n n C8 O11 JDX sing 203 n n C2 N3 JDX sing 204 n n C2 O1 JDX doub 205 n n C31 O33 JDX doub 206 n n C31 O32 JDX sing 207 n n C27 O28 JDX sing 208 n n C12 O11 JDX sing 209 n n C4 N3 JDX sing 210 n n C19 N20 JDX sing 211 n n C21 N20 JDX sing 212 n n N20 C20 JDX sing 213 n n C15 H15 JDX sing 214 n n C16 H16 JDX sing 215 n n C14 H14 JDX sing 216 n n C17 H17 JDX sing 217 n n C23 H23 JDX sing 218 n n C24 H24 JDX sing 219 n n C6 H6 JDX sing 220 n n C7 H7 JDX sing 221 n n C10 H10 JDX sing 222 n n C9 H9 JDX sing 223 n n C25 H25 JDX sing 224 n n C4 H41C JDX sing 225 n n C4 H42C JDX sing 226 n n C19 H191 JDX sing 227 n n C19 H192 JDX sing 228 n n C21 H211 JDX sing 229 n n C21 H212 JDX sing 230 n n N3 H3 JDX sing 231 n n O32 H32 JDX sing 232 n n C27 H271 JDX sing 233 n n C27 H272 JDX sing 234 n n C27 H273 JDX sing 235 n n C12 H121 JDX sing 236 n n C12 H122 JDX sing 237 n n C12 H123 JDX sing 238 n n C20 H201 JDX sing 239 n n C20 H202 JDX sing 240 n n C20 H203 JDX sing 241 n n # _atom_sites.entry_id 4CIF _atom_sites.fract_transf_matrix[1][1] 0.014089 _atom_sites.fract_transf_matrix[1][2] 0.008134 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016268 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014902 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 SO4 A 1 1210 1210 SO4 SO4 . D 2 SO4 A 1 1211 1211 SO4 SO4 . E 2 SO4 A 1 1212 1212 SO4 SO4 . F 2 SO4 A 1 1213 1213 SO4 SO4 . G 3 ACT A 1 1214 1214 ACT ACT . H 4 CL A 1 1215 1215 CL CL . I 5 JDX A 1 1216 1216 JDX JDX . J 2 SO4 B 1 1210 1210 SO4 SO4 . K 2 SO4 B 1 1211 1211 SO4 SO4 . L 2 SO4 B 1 1212 1212 SO4 SO4 . M 2 SO4 B 1 1213 1213 SO4 SO4 . N 4 CL B 1 1214 1214 CL CL . O 3 ACT B 1 1215 1215 ACT ACT . P 4 CL B 1 1216 1216 CL CL . Q 5 JDX B 1 1217 1217 JDX JDX . R 6 HOH A 1 2001 2001 HOH HOH . R 6 HOH A 2 2002 2002 HOH HOH . R 6 HOH A 3 2003 2003 HOH HOH . R 6 HOH A 4 2004 2004 HOH HOH . R 6 HOH A 5 2005 2005 HOH HOH . R 6 HOH A 6 2006 2006 HOH HOH . R 6 HOH A 7 2007 2007 HOH HOH . R 6 HOH A 8 2008 2008 HOH HOH . R 6 HOH A 9 2009 2009 HOH HOH . R 6 HOH A 10 2010 2010 HOH HOH . R 6 HOH A 11 2011 2011 HOH HOH . R 6 HOH A 12 2012 2012 HOH HOH . R 6 HOH A 13 2013 2013 HOH HOH . R 6 HOH A 14 2014 2014 HOH HOH . R 6 HOH A 15 2015 2015 HOH HOH . R 6 HOH A 16 2016 2016 HOH HOH . R 6 HOH A 17 2017 2017 HOH HOH . R 6 HOH A 18 2018 2018 HOH HOH . R 6 HOH A 19 2019 2019 HOH HOH . R 6 HOH A 20 2020 2020 HOH HOH . R 6 HOH A 21 2021 2021 HOH HOH . R 6 HOH A 22 2022 2022 HOH HOH . R 6 HOH A 23 2023 2023 HOH HOH . R 6 HOH A 24 2024 2024 HOH HOH . R 6 HOH A 25 2025 2025 HOH HOH . R 6 HOH A 26 2026 2026 HOH HOH . R 6 HOH A 27 2027 2027 HOH HOH . R 6 HOH A 28 2028 2028 HOH HOH . R 6 HOH A 29 2029 2029 HOH HOH . R 6 HOH A 30 2030 2030 HOH HOH . R 6 HOH A 31 2031 2031 HOH HOH . R 6 HOH A 32 2032 2032 HOH HOH . R 6 HOH A 33 2033 2033 HOH HOH . R 6 HOH A 34 2034 2034 HOH HOH . R 6 HOH A 35 2035 2035 HOH HOH . R 6 HOH A 36 2036 2036 HOH HOH . R 6 HOH A 37 2037 2037 HOH HOH . R 6 HOH A 38 2038 2038 HOH HOH . R 6 HOH A 39 2039 2039 HOH HOH . R 6 HOH A 40 2040 2040 HOH HOH . R 6 HOH A 41 2041 2041 HOH HOH . R 6 HOH A 42 2042 2042 HOH HOH . R 6 HOH A 43 2043 2043 HOH HOH . R 6 HOH A 44 2044 2044 HOH HOH . R 6 HOH A 45 2045 2045 HOH HOH . R 6 HOH A 46 2046 2046 HOH HOH . R 6 HOH A 47 2047 2047 HOH HOH . R 6 HOH A 48 2048 2048 HOH HOH . R 6 HOH A 49 2049 2049 HOH HOH . R 6 HOH A 50 2050 2050 HOH HOH . R 6 HOH A 51 2051 2051 HOH HOH . R 6 HOH A 52 2052 2052 HOH HOH . R 6 HOH A 53 2053 2053 HOH HOH . R 6 HOH A 54 2054 2054 HOH HOH . R 6 HOH A 55 2055 2055 HOH HOH . R 6 HOH A 56 2056 2056 HOH HOH . R 6 HOH A 57 2057 2057 HOH HOH . R 6 HOH A 58 2058 2058 HOH HOH . R 6 HOH A 59 2059 2059 HOH HOH . R 6 HOH A 60 2060 2060 HOH HOH . R 6 HOH A 61 2061 2061 HOH HOH . R 6 HOH A 62 2062 2062 HOH HOH . R 6 HOH A 63 2063 2063 HOH HOH . R 6 HOH A 64 2064 2064 HOH HOH . R 6 HOH A 65 2065 2065 HOH HOH . R 6 HOH A 66 2066 2066 HOH HOH . R 6 HOH A 67 2067 2067 HOH HOH . R 6 HOH A 68 2068 2068 HOH HOH . R 6 HOH A 69 2069 2069 HOH HOH . R 6 HOH A 70 2070 2070 HOH HOH . R 6 HOH A 71 2071 2071 HOH HOH . R 6 HOH A 72 2072 2072 HOH HOH . R 6 HOH A 73 2073 2073 HOH HOH . R 6 HOH A 74 2074 2074 HOH HOH . R 6 HOH A 75 2075 2075 HOH HOH . R 6 HOH A 76 2076 2076 HOH HOH . R 6 HOH A 77 2077 2077 HOH HOH . R 6 HOH A 78 2078 2078 HOH HOH . R 6 HOH A 79 2079 2079 HOH HOH . R 6 HOH A 80 2080 2080 HOH HOH . R 6 HOH A 81 2081 2081 HOH HOH . R 6 HOH A 82 2082 2082 HOH HOH . R 6 HOH A 83 2083 2083 HOH HOH . R 6 HOH A 84 2084 2084 HOH HOH . R 6 HOH A 85 2085 2085 HOH HOH . R 6 HOH A 86 2086 2086 HOH HOH . R 6 HOH A 87 2087 2087 HOH HOH . R 6 HOH A 88 2088 2088 HOH HOH . S 6 HOH B 1 2001 2001 HOH HOH . S 6 HOH B 2 2002 2002 HOH HOH . S 6 HOH B 3 2003 2003 HOH HOH . S 6 HOH B 4 2004 2004 HOH HOH . S 6 HOH B 5 2005 2005 HOH HOH . S 6 HOH B 6 2006 2006 HOH HOH . S 6 HOH B 7 2007 2007 HOH HOH . S 6 HOH B 8 2008 2008 HOH HOH . S 6 HOH B 9 2009 2009 HOH HOH . S 6 HOH B 10 2010 2010 HOH HOH . S 6 HOH B 11 2011 2011 HOH HOH . S 6 HOH B 12 2012 2012 HOH HOH . S 6 HOH B 13 2013 2013 HOH HOH . S 6 HOH B 14 2014 2014 HOH HOH . S 6 HOH B 15 2015 2015 HOH HOH . S 6 HOH B 16 2016 2016 HOH HOH . S 6 HOH B 17 2017 2017 HOH HOH . S 6 HOH B 18 2018 2018 HOH HOH . S 6 HOH B 19 2019 2019 HOH HOH . S 6 HOH B 20 2020 2020 HOH HOH . S 6 HOH B 21 2021 2021 HOH HOH . S 6 HOH B 22 2022 2022 HOH HOH . S 6 HOH B 23 2023 2023 HOH HOH . S 6 HOH B 24 2024 2024 HOH HOH . S 6 HOH B 25 2025 2025 HOH HOH . S 6 HOH B 26 2026 2026 HOH HOH . S 6 HOH B 27 2027 2027 HOH HOH . S 6 HOH B 28 2028 2028 HOH HOH . S 6 HOH B 29 2029 2029 HOH HOH . S 6 HOH B 30 2030 2030 HOH HOH . S 6 HOH B 31 2031 2031 HOH HOH . S 6 HOH B 32 2032 2032 HOH HOH . S 6 HOH B 33 2033 2033 HOH HOH . S 6 HOH B 34 2034 2034 HOH HOH . S 6 HOH B 35 2035 2035 HOH HOH . S 6 HOH B 36 2036 2036 HOH HOH . S 6 HOH B 37 2037 2037 HOH HOH . S 6 HOH B 38 2038 2038 HOH HOH . S 6 HOH B 39 2039 2039 HOH HOH . S 6 HOH B 40 2040 2040 HOH HOH . S 6 HOH B 41 2041 2041 HOH HOH . S 6 HOH B 42 2042 2042 HOH HOH . S 6 HOH B 43 2043 2043 HOH HOH . S 6 HOH B 44 2044 2044 HOH HOH . S 6 HOH B 45 2045 2045 HOH HOH . S 6 HOH B 46 2046 2046 HOH HOH . S 6 HOH B 47 2047 2047 HOH HOH . S 6 HOH B 48 2048 2048 HOH HOH . S 6 HOH B 49 2049 2049 HOH HOH . S 6 HOH B 50 2050 2050 HOH HOH . S 6 HOH B 51 2051 2051 HOH HOH . S 6 HOH B 52 2052 2052 HOH HOH . S 6 HOH B 53 2053 2053 HOH HOH . S 6 HOH B 54 2054 2054 HOH HOH . S 6 HOH B 55 2055 2055 HOH HOH . S 6 HOH B 56 2056 2056 HOH HOH . S 6 HOH B 57 2057 2057 HOH HOH . S 6 HOH B 58 2058 2058 HOH HOH . S 6 HOH B 59 2059 2059 HOH HOH . S 6 HOH B 60 2060 2060 HOH HOH . S 6 HOH B 61 2061 2061 HOH HOH . S 6 HOH B 62 2062 2062 HOH HOH . S 6 HOH B 63 2063 2063 HOH HOH . S 6 HOH B 64 2064 2064 HOH HOH . S 6 HOH B 65 2065 2065 HOH HOH . S 6 HOH B 66 2066 2066 HOH HOH . S 6 HOH B 67 2067 2067 HOH HOH . S 6 HOH B 68 2068 2068 HOH HOH . S 6 HOH B 69 2069 2069 HOH HOH . S 6 HOH B 70 2070 2070 HOH HOH . S 6 HOH B 71 2071 2071 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C15 JDX . . . I 5 10.778 -48.293 5.759 1 30.99 ? C15 JDX 1216 A 1 HETATM 2 C C16 JDX . . . I 5 11.697 -49.013 5.027 1 31.25 ? C16 JDX 1216 A 1 HETATM 3 C C14 JDX . . . I 5 9.687 -47.722 5.135 1 31.37 ? C14 JDX 1216 A 1 HETATM 4 C C17 JDX . . . I 5 11.526 -49.16 3.667 1 31.66 ? C17 JDX 1216 A 1 HETATM 5 C C23 JDX . . . I 5 11.161 -45.423 -1.5 1 26.77 ? C23 JDX 1216 A 1 HETATM 6 C C6 JDX . . . I 5 8.405 -43.275 1.833 1 36.21 ? C6 JDX 1216 A 1 HETATM 7 C C10 JDX . . . I 5 7.335 -44.823 0.368 1 32.8 ? C10 JDX 1216 A 1 HETATM 8 C C24 JDX . . . I 5 11.866 -44.81 -2.513 1 25.88 ? C24 JDX 1216 A 1 HETATM 9 C C7 JDX . . . I 5 8.897 -42.578 0.75 1 35.28 ? C7 JDX 1216 A 1 HETATM 10 C C9 JDX . . . I 5 7.821 -44.132 -0.721 1 31.96 ? C9 JDX 1216 A 1 HETATM 11 C C13 JDX . . . I 5 9.524 -47.872 3.774 1 31.78 ? C13 JDX 1216 A 1 HETATM 12 C C30 JDX . . . I 5 13.154 -45.637 -0.189 1 24.06 ? C30 JDX 1216 A 1 HETATM 13 C C5 JDX . . . I 5 7.626 -44.398 1.646 1 34.03 ? C5 JDX 1216 A 1 HETATM 14 C C18 JDX . . . I 5 10.443 -48.592 3.032 1 31.42 ? C18 JDX 1216 A 1 HETATM 15 C C22 JDX . . . I 5 11.789 -45.835 -0.34 1 26.61 ? C22 JDX 1216 A 1 HETATM 16 C C25 JDX . . . I 5 13.221 -44.612 -2.371 1 24.54 ? C25 JDX 1216 A 1 HETATM 17 C C29 JDX . . . I 5 13.85 -45.025 -1.215 1 23.52 ? C29 JDX 1216 A 1 HETATM 18 C C8 JDX . . . I 5 8.601 -43.014 -0.526 1 34.03 ? C8 JDX 1216 A 1 HETATM 19 C C2 JDX . . . I 5 8.351 -47.255 3.129 1 31.85 ? C2 JDX 1216 A 1 HETATM 20 C C31 JDX . . . I 5 13.889 -46.049 1.041 1 23.92 ? C31 JDX 1216 A 1 HETATM 21 C C27 JDX . . . I 5 15.795 -44.511 -2.311 1 24.36 ? C27 JDX 1216 A 1 HETATM 22 C C12 JDX . . . I 5 9.923 -41.301 -1.248 1 33.75 ? C12 JDX 1216 A 1 HETATM 23 C C4 JDX . . . I 5 7.102 -45.149 2.824 1 32.8 ? C4 JDX 1216 A 1 HETATM 24 C C19 JDX . . . I 5 10.294 -48.776 1.56 1 31.58 ? C19 JDX 1216 A 1 HETATM 25 C C21 JDX . . . I 5 10.951 -46.501 0.705 1 27.82 ? C21 JDX 1216 A 1 HETATM 26 N N3 JDX . . . I 5 8.151 -45.93 3.438 1 31.37 ? N3 JDX 1216 A 1 HETATM 27 N N20 JDX . . . I 5 11.247 -47.971 0.753 1 30.94 ? N20 JDX 1216 A 1 HETATM 28 O O33 JDX . . . I 5 13.551 -47.111 1.633 1 23.46 ? O33 JDX 1216 A 1 HETATM 29 O O1 JDX . . . I 5 7.648 -47.928 2.389 1 35.26 ? O1 JDX 1216 A 1 HETATM 30 O O32 JDX . . . I 5 14.802 -45.258 1.428 1 21.61 ? O32 JDX 1216 A 1 HETATM 31 O O28 JDX . . . I 5 15.212 -44.84 -1.055 1 23.61 ? O28 JDX 1216 A 1 HETATM 32 C C20 JDX . . . I 5 11.418 -48.628 -0.571 1 31.48 ? C20 JDX 1216 A 1 HETATM 33 O O11 JDX . . . I 5 9.065 -42.36 -1.654 1 32.93 ? O11 JDX 1216 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 307 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 33 #