data_4CIS # _model_server_result.job_id Ja5-UhPyoV_lq6-duVkwnA _model_server_result.datetime_utc '2024-11-15 05:48:47' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4cis # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":1272}' # _entry.id 4CIS # _exptl.entry_id 4CIS _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 90.121 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (R,R)-2,3-BUTANEDIOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4CIS _cell.length_a 43.063 _cell.length_b 112.692 _cell.length_c 132.882 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4CIS _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id F _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 D O3' DT 6 D DT 6 1_555 D P 68Z 7 D 68Z 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.584 ? covale ? covale2 D O3' 68Z 7 D 68Z 7 1_555 D P DT 8 D DT 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.621 ? metalc ? metalc1 A SG CYS 246 A CYS 245 1_555 E ZN ZN . A ZN 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.301 ? metalc ? metalc2 A SG CYS 249 A CYS 248 1_555 E ZN ZN . A ZN 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.334 ? metalc ? metalc3 A SG CYS 266 A CYS 265 1_555 E ZN ZN . A ZN 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.341 ? metalc ? metalc4 A SG CYS 269 A CYS 268 1_555 E ZN ZN . A ZN 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.165 ? metalc ? metalc5 B SG CYS 246 B CYS 245 1_555 G ZN ZN . B ZN 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.202 ? metalc ? metalc6 B SG CYS 249 B CYS 248 1_555 G ZN ZN . B ZN 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.452 ? metalc ? metalc7 B SG CYS 266 B CYS 265 1_555 G ZN ZN . B ZN 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.243 ? metalc ? metalc8 B SG CYS 269 B CYS 268 1_555 G ZN ZN . B ZN 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.248 ? hydrog WATSON-CRICK hydrog1 C N3 DC 2 C DC 2 1_555 D N1 DG 14 D DG 14 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog2 C N4 DC 2 C DC 2 1_555 D O6 DG 14 D DG 14 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog3 C O2 DC 2 C DC 2 1_555 D N2 DG 14 D DG 14 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog4 C N1 DG 3 C DG 3 1_555 D N3 DC 13 D DC 13 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog5 C N2 DG 3 C DG 3 1_555 D O2 DC 13 D DC 13 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog6 C O6 DG 3 C DG 3 1_555 D N4 DC 13 D DC 13 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog7 C N1 DA 4 C DA 4 1_555 D N3 DT 12 D DT 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog8 C N6 DA 4 C DA 4 1_555 D O4 DT 12 D DT 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog9 C N1 DG 5 C DG 5 1_555 D N3 DC 11 D DC 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog10 C N2 DG 5 C DG 5 1_555 D O2 DC 11 D DC 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog11 C O6 DG 5 C DG 5 1_555 D N4 DC 11 D DC 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog12 C N1 DA 6 C DA 6 1_555 D N3 DT 10 D DT 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog13 C N6 DA 6 C DA 6 1_555 D O4 DT 10 D DT 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog14 C N1 DA 7 C DA 7 1_555 D N3 DT 9 D DT 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog15 C N6 DA 7 C DA 7 1_555 D O4 DT 9 D DT 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog16 C N1 DA 8 C DA 8 1_555 D N3 DT 8 D DT 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog17 C N6 DA 8 C DA 8 1_555 D O4 DT 8 D DT 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog18 C N1 DA 10 C DA 10 1_555 D N3 DT 6 D DT 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog19 C N6 DA 10 C DA 10 1_555 D O4 DT 6 D DT 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog20 C N1 DA 11 C DA 11 1_555 D N3 DT 5 D DT 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog21 C N6 DA 11 C DA 11 1_555 D O4 DT 5 D DT 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog22 C N1 DA 12 C DA 12 1_555 D N3 DT 4 D DT 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog23 C N6 DA 12 C DA 12 1_555 D O4 DT 4 D DT 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog24 C N1 DG 13 C DG 13 1_555 D N3 DC 3 D DC 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog25 C N2 DG 13 C DG 13 1_555 D O2 DC 3 D DC 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog26 C O6 DG 13 C DG 13 1_555 D N4 DC 3 D DC 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog27 C N1 DA 14 C DA 14 1_555 D N3 DT 2 D DT 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog28 C N6 DA 14 C DA 14 1_555 D O4 DT 2 D DT 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? # _chem_comp.formula 'C4 H10 O2' _chem_comp.formula_weight 90.121 _chem_comp.id BU3 _chem_comp.mon_nstd_flag . _chem_comp.name (R,R)-2,3-BUTANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O6 C3 BU3 sing 112 n n O6 HO6 BU3 sing 113 n n C3 C4 BU3 sing 114 n n C3 C2 BU3 sing 115 n n C3 H3 BU3 sing 116 n n C4 H41 BU3 sing 117 n n C4 H42 BU3 sing 118 n n C4 H43 BU3 sing 119 n n C2 O5 BU3 sing 120 n n C2 C1 BU3 sing 121 n n C2 H2 BU3 sing 122 n n O5 HO5 BU3 sing 123 n n C1 H11 BU3 sing 124 n n C1 H12 BU3 sing 125 n n C1 H13 BU3 sing 126 n n # _atom_sites.entry_id 4CIS _atom_sites.fract_transf_matrix[1][1] 0.023222 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008874 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007525 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 4 ZN A 1 300 300 ZN ZN . F 5 BU3 A 1 1272 1272 BU3 BU3 . G 4 ZN B 1 300 300 ZN ZN . H 6 HOH A 1 2001 2001 HOH HOH . H 6 HOH A 2 2002 2002 HOH HOH . H 6 HOH A 3 2003 2003 HOH HOH . H 6 HOH A 4 2004 2004 HOH HOH . H 6 HOH A 5 2005 2005 HOH HOH . H 6 HOH A 6 2006 2006 HOH HOH . H 6 HOH A 7 2007 2007 HOH HOH . H 6 HOH A 8 2008 2008 HOH HOH . H 6 HOH A 9 2009 2009 HOH HOH . H 6 HOH A 10 2010 2010 HOH HOH . H 6 HOH A 11 2011 2011 HOH HOH . H 6 HOH A 12 2012 2012 HOH HOH . H 6 HOH A 13 2013 2013 HOH HOH . H 6 HOH A 14 2014 2014 HOH HOH . H 6 HOH A 15 2015 2015 HOH HOH . H 6 HOH A 16 2016 2016 HOH HOH . H 6 HOH A 17 2017 2017 HOH HOH . H 6 HOH A 18 2018 2018 HOH HOH . H 6 HOH A 19 2019 2019 HOH HOH . H 6 HOH A 20 2020 2020 HOH HOH . H 6 HOH A 21 2021 2021 HOH HOH . H 6 HOH A 22 2022 2022 HOH HOH . H 6 HOH A 23 2023 2023 HOH HOH . H 6 HOH A 24 2024 2024 HOH HOH . H 6 HOH A 25 2025 2025 HOH HOH . H 6 HOH A 26 2026 2026 HOH HOH . H 6 HOH A 27 2027 2027 HOH HOH . H 6 HOH A 28 2028 2028 HOH HOH . H 6 HOH A 29 2029 2029 HOH HOH . H 6 HOH A 30 2030 2030 HOH HOH . H 6 HOH A 31 2031 2031 HOH HOH . H 6 HOH A 32 2032 2032 HOH HOH . H 6 HOH A 33 2033 2033 HOH HOH . H 6 HOH A 34 2034 2034 HOH HOH . H 6 HOH A 35 2035 2035 HOH HOH . H 6 HOH A 36 2036 2036 HOH HOH . H 6 HOH A 37 2037 2037 HOH HOH . H 6 HOH A 38 2038 2038 HOH HOH . H 6 HOH A 39 2039 2039 HOH HOH . H 6 HOH A 40 2040 2040 HOH HOH . H 6 HOH A 41 2041 2041 HOH HOH . H 6 HOH A 42 2042 2042 HOH HOH . H 6 HOH A 43 2043 2043 HOH HOH . H 6 HOH A 44 2044 2044 HOH HOH . H 6 HOH A 45 2045 2045 HOH HOH . H 6 HOH A 46 2046 2046 HOH HOH . H 6 HOH A 47 2047 2047 HOH HOH . H 6 HOH A 48 2048 2048 HOH HOH . H 6 HOH A 49 2049 2049 HOH HOH . H 6 HOH A 50 2050 2050 HOH HOH . H 6 HOH A 51 2051 2051 HOH HOH . H 6 HOH A 52 2052 2052 HOH HOH . H 6 HOH A 53 2053 2053 HOH HOH . H 6 HOH A 54 2054 2054 HOH HOH . H 6 HOH A 55 2055 2055 HOH HOH . H 6 HOH A 56 2056 2056 HOH HOH . H 6 HOH A 57 2057 2057 HOH HOH . H 6 HOH A 58 2058 2058 HOH HOH . H 6 HOH A 59 2059 2059 HOH HOH . H 6 HOH A 60 2060 2060 HOH HOH . H 6 HOH A 61 2061 2061 HOH HOH . H 6 HOH A 62 2062 2062 HOH HOH . H 6 HOH A 63 2063 2063 HOH HOH . H 6 HOH A 64 2064 2064 HOH HOH . H 6 HOH A 65 2065 2065 HOH HOH . H 6 HOH A 66 2066 2066 HOH HOH . I 6 HOH B 1 2001 2001 HOH HOH . I 6 HOH B 2 2002 2002 HOH HOH . I 6 HOH B 3 2003 2003 HOH HOH . I 6 HOH B 4 2004 2004 HOH HOH . I 6 HOH B 5 2005 2005 HOH HOH . I 6 HOH B 6 2006 2006 HOH HOH . I 6 HOH B 7 2007 2007 HOH HOH . I 6 HOH B 8 2008 2008 HOH HOH . I 6 HOH B 9 2009 2009 HOH HOH . I 6 HOH B 10 2010 2010 HOH HOH . I 6 HOH B 11 2011 2011 HOH HOH . I 6 HOH B 12 2012 2012 HOH HOH . I 6 HOH B 13 2013 2013 HOH HOH . I 6 HOH B 14 2014 2014 HOH HOH . I 6 HOH B 15 2015 2015 HOH HOH . I 6 HOH B 16 2016 2016 HOH HOH . I 6 HOH B 17 2017 2017 HOH HOH . I 6 HOH B 18 2018 2018 HOH HOH . I 6 HOH B 19 2019 2019 HOH HOH . I 6 HOH B 20 2020 2020 HOH HOH . I 6 HOH B 21 2021 2021 HOH HOH . I 6 HOH B 22 2022 2022 HOH HOH . I 6 HOH B 23 2023 2023 HOH HOH . I 6 HOH B 24 2024 2024 HOH HOH . I 6 HOH B 25 2025 2025 HOH HOH . I 6 HOH B 26 2026 2026 HOH HOH . I 6 HOH B 27 2027 2027 HOH HOH . I 6 HOH B 28 2028 2028 HOH HOH . I 6 HOH B 29 2029 2029 HOH HOH . I 6 HOH B 30 2030 2030 HOH HOH . I 6 HOH B 31 2031 2031 HOH HOH . I 6 HOH B 32 2032 2032 HOH HOH . I 6 HOH B 33 2033 2033 HOH HOH . I 6 HOH B 34 2034 2034 HOH HOH . I 6 HOH B 35 2035 2035 HOH HOH . I 6 HOH B 36 2036 2036 HOH HOH . I 6 HOH B 37 2037 2037 HOH HOH . I 6 HOH B 38 2038 2038 HOH HOH . I 6 HOH B 39 2039 2039 HOH HOH . I 6 HOH B 40 2040 2040 HOH HOH . I 6 HOH B 41 2041 2041 HOH HOH . I 6 HOH B 42 2042 2042 HOH HOH . I 6 HOH B 43 2043 2043 HOH HOH . I 6 HOH B 44 2044 2044 HOH HOH . I 6 HOH B 45 2045 2045 HOH HOH . I 6 HOH B 46 2046 2046 HOH HOH . I 6 HOH B 47 2047 2047 HOH HOH . I 6 HOH B 48 2048 2048 HOH HOH . I 6 HOH B 49 2049 2049 HOH HOH . I 6 HOH B 50 2050 2050 HOH HOH . I 6 HOH B 51 2051 2051 HOH HOH . I 6 HOH B 52 2052 2052 HOH HOH . I 6 HOH B 53 2053 2053 HOH HOH . I 6 HOH B 54 2054 2054 HOH HOH . I 6 HOH B 55 2055 2055 HOH HOH . I 6 HOH B 56 2056 2056 HOH HOH . I 6 HOH B 57 2057 2057 HOH HOH . I 6 HOH B 58 2058 2058 HOH HOH . I 6 HOH B 59 2059 2059 HOH HOH . I 6 HOH B 60 2060 2060 HOH HOH . I 6 HOH B 61 2061 2061 HOH HOH . I 6 HOH B 62 2062 2062 HOH HOH . I 6 HOH B 63 2063 2063 HOH HOH . I 6 HOH B 64 2064 2064 HOH HOH . I 6 HOH B 65 2065 2065 HOH HOH . I 6 HOH B 66 2066 2066 HOH HOH . I 6 HOH B 67 2067 2067 HOH HOH . J 6 HOH D 1 2001 2001 HOH HOH . J 6 HOH D 2 2002 2002 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O6 BU3 . . . F 5 -3.738 -10.093 45.478 1 20.5 ? O6 BU3 1272 A 1 HETATM 2 C C3 BU3 . . . F 5 -5.055 -10.461 45.987 1 20.54 ? C3 BU3 1272 A 1 HETATM 3 C C4 BU3 . . . F 5 -4.995 -11.904 46.392 1 27.32 ? C4 BU3 1272 A 1 HETATM 4 C C2 BU3 . . . F 5 -6.054 -10.587 44.897 1 25.19 ? C2 BU3 1272 A 1 HETATM 5 O O5 BU3 . . . F 5 -6.243 -9.187 44.419 1 24.84 ? O5 BU3 1272 A 1 HETATM 6 C C1 BU3 . . . F 5 -7.256 -11.49 45.449 1 21.54 ? C1 BU3 1272 A 1 # _model_server_stats.io_time_ms 19 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 333 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 6 #