data_4CJ5 # _model_server_result.job_id qRiwFs1ov2d6xAmRQw6o8A _model_server_result.datetime_utc '2024-11-22 05:48:38' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4cj5 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"N","auth_seq_id":1214}' # _entry.id 4CJ5 # _exptl.entry_id 4CJ5 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 398.452 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '5-[(2S)-2-[[(4-aminophenyl)carbonylamino]methyl]-4-methyl-pentyl]-1,3-benzodioxole-4-carboxylic acid' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4CJ5 _cell.length_a 71.346 _cell.length_b 71.346 _cell.length_c 66.825 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4CJ5 _symmetry.cell_setting ? _symmetry.Int_Tables_number 144 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 31' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 I N N ? 5 N N N # _chem_comp.formula 'C22 H26 N2 O5' _chem_comp.formula_weight 398.452 _chem_comp.id 4VW _chem_comp.mon_nstd_flag . _chem_comp.name '5-[(2S)-2-[[(4-aminophenyl)carbonylamino]methyl]-4-methyl-pentyl]-1,3-benzodioxole-4-carboxylic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C4 4VW sing 1 n y C1 C7 4VW doub 2 n y C2 C5 4VW doub 3 n y C2 C7 4VW sing 4 n y C3 C6 4VW sing 5 n y C3 C9 4VW doub 6 n y C4 C10 4VW doub 7 n y C5 C10 4VW sing 8 n y C6 C11 4VW doub 9 n y C7 C13 4VW sing 10 n n C8 C9 4VW sing 11 n y C8 C12 4VW doub 12 n y C8 C14 4VW sing 13 n n C9 C18 4VW sing 14 n n C10 N23 4VW sing 15 n n C11 C12 4VW sing 16 n y C11 O28 4VW sing 17 n n C12 O29 4VW sing 18 n n C13 N24 4VW sing 19 n n C13 O26 4VW doub 20 n n C14 O25 4VW sing 21 n n C14 O27 4VW doub 22 n n C15 O28 4VW sing 23 n n C15 O29 4VW sing 24 n n C16 C21 4VW sing 25 n n C17 C21 4VW sing 26 n n C18 C22 4VW sing 27 n n C19 C21 4VW sing 28 n n C19 C22 4VW sing 29 n n C20 C22 4VW sing 30 n n C20 N24 4VW sing 31 n n C1 H1 4VW sing 32 n n C4 H4 4VW sing 33 n n C2 H2 4VW sing 34 n n C5 H5 4VW sing 35 n n C3 H3 4VW sing 36 n n C6 H6 4VW sing 37 n n C18 H181 4VW sing 38 n n C18 H182 4VW sing 39 n n N23 H231 4VW sing 40 n n N23 H232 4VW sing 41 n n N24 H24 4VW sing 42 n n O25 H25 4VW sing 43 n n C15 H151 4VW sing 44 n n C15 H152 4VW sing 45 n n C16 H161 4VW sing 46 n n C16 H162 4VW sing 47 n n C16 H163 4VW sing 48 n n C21 H21 4VW sing 49 n n C17 H171 4VW sing 50 n n C17 H172 4VW sing 51 n n C17 H173 4VW sing 52 n n C22 H22 4VW sing 53 n n C19 H191 4VW sing 54 n n C19 H192 4VW sing 55 n n C20 H201 4VW sing 56 n n C20 H202 4VW sing 57 n n # _atom_sites.entry_id 4CJ5 _atom_sites.fract_transf_matrix[1][1] 0.014016 _atom_sites.fract_transf_matrix[1][2] 0.008092 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016185 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014964 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 SO4 A 1 1210 1210 SO4 SO4 . D 2 SO4 A 1 1211 1211 SO4 SO4 . E 2 SO4 A 1 1212 1212 SO4 SO4 . F 3 ACT A 1 1213 1213 ACT ACT . G 4 CL A 1 1214 1214 CL CL . H 4 CL A 1 1215 1215 CL CL . I 5 4VW A 1 1216 1216 4VW 4VW . J 2 SO4 B 1 1210 1210 SO4 SO4 . K 2 SO4 B 1 1211 1211 SO4 SO4 . L 2 SO4 B 1 1212 1212 SO4 SO4 . M 3 ACT B 1 1213 1213 ACT ACT . N 5 4VW B 1 1214 1214 4VW 4VW . O 6 HOH A 1 2001 2001 HOH HOH . O 6 HOH A 2 2002 2002 HOH HOH . O 6 HOH A 3 2003 2003 HOH HOH . O 6 HOH A 4 2004 2004 HOH HOH . O 6 HOH A 5 2005 2005 HOH HOH . O 6 HOH A 6 2006 2006 HOH HOH . O 6 HOH A 7 2007 2007 HOH HOH . O 6 HOH A 8 2008 2008 HOH HOH . O 6 HOH A 9 2009 2009 HOH HOH . O 6 HOH A 10 2010 2010 HOH HOH . O 6 HOH A 11 2011 2011 HOH HOH . O 6 HOH A 12 2012 2012 HOH HOH . O 6 HOH A 13 2013 2013 HOH HOH . O 6 HOH A 14 2014 2014 HOH HOH . O 6 HOH A 15 2015 2015 HOH HOH . O 6 HOH A 16 2016 2016 HOH HOH . O 6 HOH A 17 2017 2017 HOH HOH . O 6 HOH A 18 2018 2018 HOH HOH . O 6 HOH A 19 2019 2019 HOH HOH . O 6 HOH A 20 2020 2020 HOH HOH . O 6 HOH A 21 2021 2021 HOH HOH . O 6 HOH A 22 2022 2022 HOH HOH . O 6 HOH A 23 2023 2023 HOH HOH . O 6 HOH A 24 2024 2024 HOH HOH . O 6 HOH A 25 2025 2025 HOH HOH . O 6 HOH A 26 2026 2026 HOH HOH . O 6 HOH A 27 2027 2027 HOH HOH . O 6 HOH A 28 2028 2028 HOH HOH . O 6 HOH A 29 2029 2029 HOH HOH . O 6 HOH A 30 2030 2030 HOH HOH . O 6 HOH A 31 2031 2031 HOH HOH . O 6 HOH A 32 2032 2032 HOH HOH . O 6 HOH A 33 2033 2033 HOH HOH . O 6 HOH A 34 2034 2034 HOH HOH . O 6 HOH A 35 2035 2035 HOH HOH . O 6 HOH A 36 2036 2036 HOH HOH . O 6 HOH A 37 2037 2037 HOH HOH . O 6 HOH A 38 2038 2038 HOH HOH . O 6 HOH A 39 2039 2039 HOH HOH . O 6 HOH A 40 2040 2040 HOH HOH . O 6 HOH A 41 2041 2041 HOH HOH . O 6 HOH A 42 2042 2042 HOH HOH . O 6 HOH A 43 2043 2043 HOH HOH . O 6 HOH A 44 2044 2044 HOH HOH . O 6 HOH A 45 2045 2045 HOH HOH . O 6 HOH A 46 2046 2046 HOH HOH . O 6 HOH A 47 2047 2047 HOH HOH . O 6 HOH A 48 2048 2048 HOH HOH . O 6 HOH A 49 2049 2049 HOH HOH . O 6 HOH A 50 2050 2050 HOH HOH . O 6 HOH A 51 2051 2051 HOH HOH . O 6 HOH A 52 2052 2052 HOH HOH . O 6 HOH A 53 2053 2053 HOH HOH . O 6 HOH A 54 2054 2054 HOH HOH . O 6 HOH A 55 2055 2055 HOH HOH . O 6 HOH A 56 2056 2056 HOH HOH . O 6 HOH A 57 2057 2057 HOH HOH . O 6 HOH A 58 2058 2058 HOH HOH . O 6 HOH A 59 2059 2059 HOH HOH . O 6 HOH A 60 2060 2060 HOH HOH . O 6 HOH A 61 2061 2061 HOH HOH . P 6 HOH B 1 2001 2001 HOH HOH . P 6 HOH B 2 2002 2002 HOH HOH . P 6 HOH B 3 2003 2003 HOH HOH . P 6 HOH B 4 2004 2004 HOH HOH . P 6 HOH B 5 2005 2005 HOH HOH . P 6 HOH B 6 2006 2006 HOH HOH . P 6 HOH B 7 2007 2007 HOH HOH . P 6 HOH B 8 2008 2008 HOH HOH . P 6 HOH B 9 2009 2009 HOH HOH . P 6 HOH B 10 2010 2010 HOH HOH . P 6 HOH B 11 2011 2011 HOH HOH . P 6 HOH B 12 2012 2012 HOH HOH . P 6 HOH B 13 2013 2013 HOH HOH . P 6 HOH B 14 2014 2014 HOH HOH . P 6 HOH B 15 2015 2015 HOH HOH . P 6 HOH B 16 2016 2016 HOH HOH . P 6 HOH B 17 2017 2017 HOH HOH . P 6 HOH B 18 2018 2018 HOH HOH . P 6 HOH B 19 2019 2019 HOH HOH . P 6 HOH B 20 2020 2020 HOH HOH . P 6 HOH B 21 2021 2021 HOH HOH . P 6 HOH B 22 2022 2022 HOH HOH . P 6 HOH B 23 2023 2023 HOH HOH . P 6 HOH B 24 2024 2024 HOH HOH . P 6 HOH B 25 2025 2025 HOH HOH . P 6 HOH B 26 2026 2026 HOH HOH . P 6 HOH B 27 2027 2027 HOH HOH . P 6 HOH B 28 2028 2028 HOH HOH . P 6 HOH B 29 2029 2029 HOH HOH . P 6 HOH B 30 2030 2030 HOH HOH . P 6 HOH B 31 2031 2031 HOH HOH . P 6 HOH B 32 2032 2032 HOH HOH . P 6 HOH B 33 2033 2033 HOH HOH . P 6 HOH B 34 2034 2034 HOH HOH . P 6 HOH B 35 2035 2035 HOH HOH . P 6 HOH B 36 2036 2036 HOH HOH . P 6 HOH B 37 2037 2037 HOH HOH . P 6 HOH B 38 2038 2038 HOH HOH . P 6 HOH B 39 2039 2039 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 4VW . . . N 5 10.362 -49.846 15.433 1 50.14 ? C1 4VW 1214 B 1 HETATM 2 C C2 4VW . . . N 5 9.74 -47.769 16.455 1 46.3 ? C2 4VW 1214 B 1 HETATM 3 C C3 4VW . . . N 5 11.23 -44.067 10.551 1 24.4 ? C3 4VW 1214 B 1 HETATM 4 C C4 4VW . . . N 5 10.921 -50.252 16.626 1 51.61 ? C4 4VW 1214 B 1 HETATM 5 C C5 4VW . . . N 5 10.302 -48.183 17.64 1 48.42 ? C5 4VW 1214 B 1 HETATM 6 C C6 4VW . . . N 5 12.144 -44.129 9.523 1 26.16 ? C6 4VW 1214 B 1 HETATM 7 C C7 4VW . . . N 5 9.778 -48.603 15.367 1 43.9 ? C7 4VW 1214 B 1 HETATM 8 C C8 4VW . . . N 5 12.801 -44.998 12.122 1 25.41 ? C8 4VW 1214 B 1 HETATM 9 C C9 4VW . . . N 5 11.535 -44.498 11.834 1 24.26 ? C9 4VW 1214 B 1 HETATM 10 C C10 4VW . . . N 5 10.893 -49.423 17.728 1 51.3 ? C10 4VW 1214 B 1 HETATM 11 C C11 4VW . . . N 5 13.386 -44.624 9.82 1 27 ? C11 4VW 1214 B 1 HETATM 12 C C12 4VW . . . N 5 13.698 -45.045 11.078 1 26.38 ? C12 4VW 1214 B 1 HETATM 13 C C13 4VW . . . N 5 9.17 -48.14 14.122 1 39.89 ? C13 4VW 1214 B 1 HETATM 14 C C14 4VW . . . N 5 13.251 -45.482 13.464 1 26.11 ? C14 4VW 1214 B 1 HETATM 15 C C15 4VW . . . N 5 15.471 -44.918 9.915 1 31.3 ? C15 4VW 1214 B 1 HETATM 16 C C16 4VW . . . N 5 7.406 -42.45 12.601 1 26.06 ? C16 4VW 1214 B 1 HETATM 17 C C17 4VW . . . N 5 6.812 -43.076 14.931 1 28.98 ? C17 4VW 1214 B 1 HETATM 18 C C18 4VW . . . N 5 10.457 -44.358 12.867 1 24.85 ? C18 4VW 1214 B 1 HETATM 19 C C19 4VW . . . N 5 8.067 -44.692 13.527 1 26.69 ? C19 4VW 1214 B 1 HETATM 20 C C20 4VW . . . N 5 9.277 -46.475 12.346 1 29.7 ? C20 4VW 1214 B 1 HETATM 21 C C21 4VW . . . N 5 7.846 -43.215 13.829 1 26.73 ? C21 4VW 1214 B 1 HETATM 22 C C22 4VW . . . N 5 9.127 -44.977 12.477 1 26.27 ? C22 4VW 1214 B 1 HETATM 23 N N23 4VW . . . N 5 11.457 -49.827 18.946 1 53.81 ? N23 4VW 1214 B 1 HETATM 24 N N24 4VW . . . N 5 9.835 -47.084 13.532 1 30.55 ? N24 4VW 1214 B 1 HETATM 25 O O25 4VW . . . N 5 14.372 -45.077 13.892 1 24.17 ? O25 4VW 1214 B 1 HETATM 26 O O26 4VW . . . N 5 8.155 -48.693 13.725 1 37.96 ? O26 4VW 1214 B 1 HETATM 27 O O27 4VW . . . N 5 12.502 -46.291 14.079 1 24.22 ? O27 4VW 1214 B 1 HETATM 28 O O28 4VW . . . N 5 14.428 -44.749 8.945 1 29.77 ? O28 4VW 1214 B 1 HETATM 29 O O29 4VW . . . N 5 14.99 -45.493 11.146 1 29.57 ? O29 4VW 1214 B 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 276 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 29 #