data_4CJK
#
_model_server_result.job_id            5_JnbesZrTiQm3elpfyang 
_model_server_result.datetime_utc      '2024-11-22 05:24:54' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4cjk 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"H","auth_seq_id":1215}' 
#
_entry.id    4CJK 
#
_exptl.entry_id    4CJK 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              386.442 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '5-[(2S)-4-methyl-2-{[(1H-pyrrol-3-ylacetyl)amino]methyl}pentyl]-1,3-benzodioxole-4-carboxylic acid' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            4CJK 
_cell.length_a            71.177 
_cell.length_b            71.177 
_cell.length_c            66.662 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4CJK 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        144 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 31' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 5 H N N 
? 5 P N N 
#
_chem_comp.formula           'C21 H26 N2 O5' 
_chem_comp.formula_weight    386.442 
_chem_comp.id                H39 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '5-[(2S)-4-methyl-2-{[(1H-pyrrol-3-ylacetyl)amino]methyl}pentyl]-1,3-benzodioxole-4-carboxylic acid' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C7 C1 H39 doub 135 n y 
C1 C2 H39 sing 136 n y 
C1 H1 H39 sing 137 n n 
C9 C2 H39 doub 138 n y 
C2 H2 H39 sing 139 n n 
C4 C3 H39 doub 140 n y 
C3 C8 H39 sing 141 n y 
C3 H3 H39 sing 142 n n 
C4 N22 H39 sing 143 n y 
C4 H4 H39 sing 144 n n 
N22 C5 H39 sing 145 n y 
C5 C8 H39 doub 146 n y 
C5 H5 H39 sing 147 n n 
C11 C6 H39 sing 148 n n 
C6 C7 H39 sing 149 n y 
C6 C10 H39 doub 150 n y 
C17 C7 H39 sing 151 n n 
C8 C16 H39 sing 152 n n 
C10 C9 H39 sing 153 n y 
C9 O27 H39 sing 154 n n 
O28 C10 H39 sing 155 n n 
O25 C11 H39 doub 156 n n 
O24 C11 H39 sing 157 n n 
C16 C12 H39 sing 158 n n 
C12 O26 H39 doub 159 n n 
C12 N23 H39 sing 160 n n 
O28 C13 H39 sing 161 n n 
C13 O27 H39 sing 162 n n 
C13 H13 H39 sing 163 n n 
C13 H13A H39 sing 164 n n 
C20 C14 H39 sing 165 n n 
C14 H14 H39 sing 166 n n 
C14 H14A H39 sing 167 n n 
C14 H14B H39 sing 168 n n 
C15 C20 H39 sing 169 n n 
C15 H15 H39 sing 170 n n 
C15 H15A H39 sing 171 n n 
C15 H15B H39 sing 172 n n 
C16 H16 H39 sing 173 n n 
C16 H16A H39 sing 174 n n 
C17 C21 H39 sing 175 n n 
C17 H17 H39 sing 176 n n 
C17 H17A H39 sing 177 n n 
C20 C18 H39 sing 178 n n 
C18 C21 H39 sing 179 n n 
C18 H18 H39 sing 180 n n 
C18 H18A H39 sing 181 n n 
N23 C19 H39 sing 182 n n 
C21 C19 H39 sing 183 n n 
C19 H19 H39 sing 184 n n 
C19 H19A H39 sing 185 n n 
C20 H20 H39 sing 186 n n 
C21 H21 H39 sing 187 n n 
N23 HN23 H39 sing 188 n n 
O24 HO24 H39 sing 189 n n 
N22 HN22 H39 sing 190 n n 
#
_atom_sites.entry_id                     4CJK 
_atom_sites.fract_transf_matrix[1][1]    0.014049 
_atom_sites.fract_transf_matrix[1][2]    0.008111 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.016223 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.015001 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 SO4 A 1 1210 1210 SO4 SO4 . 
D 2 SO4 A 1 1211 1211 SO4 SO4 . 
E 2 SO4 A 1 1212 1212 SO4 SO4 . 
F 3 ACT A 1 1213 1213 ACT ACT . 
G 4 CL A 1 1214 1214 CL CL . 
H 5 H39 A 1 1215 1215 H39 H39 . 
I 2 SO4 B 1 1210 1210 SO4 SO4 . 
J 2 SO4 B 1 1211 1211 SO4 SO4 . 
K 2 SO4 B 1 1212 1212 SO4 SO4 . 
L 3 ACT B 1 1213 1213 ACT ACT . 
M 3 ACT B 1 1214 1214 ACT ACT . 
N 3 ACT B 1 1215 1215 ACT ACT . 
O 4 CL B 1 1216 1216 CL CL . 
P 5 H39 B 1 1217 1217 H39 H39 . 
Q 6 HOH A 1 2001 2001 HOH HOH . 
Q 6 HOH A 2 2002 2002 HOH HOH . 
Q 6 HOH A 3 2003 2003 HOH HOH . 
Q 6 HOH A 4 2004 2004 HOH HOH . 
Q 6 HOH A 5 2005 2005 HOH HOH . 
Q 6 HOH A 6 2006 2006 HOH HOH . 
Q 6 HOH A 7 2007 2007 HOH HOH . 
Q 6 HOH A 8 2008 2008 HOH HOH . 
Q 6 HOH A 9 2009 2009 HOH HOH . 
Q 6 HOH A 10 2010 2010 HOH HOH . 
Q 6 HOH A 11 2011 2011 HOH HOH . 
Q 6 HOH A 12 2012 2012 HOH HOH . 
Q 6 HOH A 13 2013 2013 HOH HOH . 
Q 6 HOH A 14 2014 2014 HOH HOH . 
Q 6 HOH A 15 2015 2015 HOH HOH . 
Q 6 HOH A 16 2016 2016 HOH HOH . 
Q 6 HOH A 17 2017 2017 HOH HOH . 
Q 6 HOH A 18 2018 2018 HOH HOH . 
Q 6 HOH A 19 2019 2019 HOH HOH . 
Q 6 HOH A 20 2020 2020 HOH HOH . 
Q 6 HOH A 21 2021 2021 HOH HOH . 
Q 6 HOH A 22 2022 2022 HOH HOH . 
Q 6 HOH A 23 2023 2023 HOH HOH . 
Q 6 HOH A 24 2024 2024 HOH HOH . 
Q 6 HOH A 25 2025 2025 HOH HOH . 
Q 6 HOH A 26 2026 2026 HOH HOH . 
Q 6 HOH A 27 2027 2027 HOH HOH . 
Q 6 HOH A 28 2028 2028 HOH HOH . 
Q 6 HOH A 29 2029 2029 HOH HOH . 
Q 6 HOH A 30 2030 2030 HOH HOH . 
Q 6 HOH A 31 2031 2031 HOH HOH . 
Q 6 HOH A 32 2032 2032 HOH HOH . 
Q 6 HOH A 33 2033 2033 HOH HOH . 
Q 6 HOH A 34 2034 2034 HOH HOH . 
Q 6 HOH A 35 2035 2035 HOH HOH . 
Q 6 HOH A 36 2036 2036 HOH HOH . 
Q 6 HOH A 37 2037 2037 HOH HOH . 
Q 6 HOH A 38 2038 2038 HOH HOH . 
Q 6 HOH A 39 2039 2039 HOH HOH . 
Q 6 HOH A 40 2040 2040 HOH HOH . 
Q 6 HOH A 41 2041 2041 HOH HOH . 
Q 6 HOH A 42 2042 2042 HOH HOH . 
Q 6 HOH A 43 2043 2043 HOH HOH . 
Q 6 HOH A 44 2044 2044 HOH HOH . 
Q 6 HOH A 45 2045 2045 HOH HOH . 
Q 6 HOH A 46 2046 2046 HOH HOH . 
Q 6 HOH A 47 2047 2047 HOH HOH . 
Q 6 HOH A 48 2048 2048 HOH HOH . 
Q 6 HOH A 49 2049 2049 HOH HOH . 
Q 6 HOH A 50 2050 2050 HOH HOH . 
Q 6 HOH A 51 2051 2051 HOH HOH . 
Q 6 HOH A 52 2052 2052 HOH HOH . 
Q 6 HOH A 53 2053 2053 HOH HOH . 
Q 6 HOH A 54 2054 2054 HOH HOH . 
Q 6 HOH A 55 2055 2055 HOH HOH . 
Q 6 HOH A 56 2056 2056 HOH HOH . 
Q 6 HOH A 57 2057 2057 HOH HOH . 
Q 6 HOH A 58 2058 2058 HOH HOH . 
Q 6 HOH A 59 2059 2059 HOH HOH . 
Q 6 HOH A 60 2060 2060 HOH HOH . 
Q 6 HOH A 61 2061 2061 HOH HOH . 
Q 6 HOH A 62 2062 2062 HOH HOH . 
Q 6 HOH A 63 2063 2063 HOH HOH . 
Q 6 HOH A 64 2064 2064 HOH HOH . 
Q 6 HOH A 65 2065 2065 HOH HOH . 
Q 6 HOH A 66 2066 2066 HOH HOH . 
Q 6 HOH A 67 2067 2067 HOH HOH . 
Q 6 HOH A 68 2068 2068 HOH HOH . 
Q 6 HOH A 69 2069 2069 HOH HOH . 
Q 6 HOH A 70 2070 2070 HOH HOH . 
Q 6 HOH A 71 2071 2071 HOH HOH . 
Q 6 HOH A 72 2072 2072 HOH HOH . 
Q 6 HOH A 73 2073 2073 HOH HOH . 
R 6 HOH B 1 2001 2001 HOH HOH . 
R 6 HOH B 2 2002 2002 HOH HOH . 
R 6 HOH B 3 2003 2003 HOH HOH . 
R 6 HOH B 4 2004 2004 HOH HOH . 
R 6 HOH B 5 2005 2005 HOH HOH . 
R 6 HOH B 6 2006 2006 HOH HOH . 
R 6 HOH B 7 2007 2007 HOH HOH . 
R 6 HOH B 8 2008 2008 HOH HOH . 
R 6 HOH B 9 2009 2009 HOH HOH . 
R 6 HOH B 10 2010 2010 HOH HOH . 
R 6 HOH B 11 2011 2011 HOH HOH . 
R 6 HOH B 12 2012 2012 HOH HOH . 
R 6 HOH B 13 2013 2013 HOH HOH . 
R 6 HOH B 14 2014 2014 HOH HOH . 
R 6 HOH B 15 2015 2015 HOH HOH . 
R 6 HOH B 16 2016 2016 HOH HOH . 
R 6 HOH B 17 2017 2017 HOH HOH . 
R 6 HOH B 18 2018 2018 HOH HOH . 
R 6 HOH B 19 2019 2019 HOH HOH . 
R 6 HOH B 20 2020 2020 HOH HOH . 
R 6 HOH B 21 2021 2021 HOH HOH . 
R 6 HOH B 22 2022 2022 HOH HOH . 
R 6 HOH B 23 2023 2023 HOH HOH . 
R 6 HOH B 24 2024 2024 HOH HOH . 
R 6 HOH B 25 2025 2025 HOH HOH . 
R 6 HOH B 26 2026 2026 HOH HOH . 
R 6 HOH B 27 2027 2027 HOH HOH . 
R 6 HOH B 28 2028 2028 HOH HOH . 
R 6 HOH B 29 2029 2029 HOH HOH . 
R 6 HOH B 30 2030 2030 HOH HOH . 
R 6 HOH B 31 2031 2031 HOH HOH . 
R 6 HOH B 32 2032 2032 HOH HOH . 
R 6 HOH B 33 2033 2033 HOH HOH . 
R 6 HOH B 34 2034 2034 HOH HOH . 
R 6 HOH B 35 2035 2035 HOH HOH . 
R 6 HOH B 36 2036 2036 HOH HOH . 
R 6 HOH B 37 2037 2037 HOH HOH . 
R 6 HOH B 38 2038 2038 HOH HOH . 
R 6 HOH B 39 2039 2039 HOH HOH . 
R 6 HOH B 40 2040 2040 HOH HOH . 
R 6 HOH B 41 2041 2041 HOH HOH . 
R 6 HOH B 42 2042 2042 HOH HOH . 
R 6 HOH B 43 2043 2043 HOH HOH . 
R 6 HOH B 44 2044 2044 HOH HOH . 
R 6 HOH B 45 2045 2045 HOH HOH . 
R 6 HOH B 46 2046 2046 HOH HOH . 
R 6 HOH B 47 2047 2047 HOH HOH . 
R 6 HOH B 48 2048 2048 HOH HOH . 
R 6 HOH B 49 2049 2049 HOH HOH . 
R 6 HOH B 50 2050 2050 HOH HOH . 
R 6 HOH B 51 2051 2051 HOH HOH . 
R 6 HOH B 52 2052 2052 HOH HOH . 
R 6 HOH B 53 2053 2053 HOH HOH . 
R 6 HOH B 54 2054 2054 HOH HOH . 
R 6 HOH B 55 2055 2055 HOH HOH . 
R 6 HOH B 56 2056 2056 HOH HOH . 
R 6 HOH B 57 2057 2057 HOH HOH . 
R 6 HOH B 58 2058 2058 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 H39 . . . H 5 32.529 -31.727 1.005 1 22.2 ? C1 H39 1215 A 1 
HETATM 2 C C2 H39 . . . H 5 32.075 -32.507 2.045 1 22.66 ? C2 H39 1215 A 1 
HETATM 3 C C3 H39 . . . H 5 36.688 -32.576 -5.631 1 47.37 ? C3 H39 1215 A 1 
HETATM 4 C C4 H39 . . . H 5 37.383 -32.28 -6.782 1 49 ? C4 H39 1215 A 1 
HETATM 5 C C5 H39 . . . H 5 38.877 -32.842 -5.224 1 47.26 ? C5 H39 1215 A 1 
HETATM 6 C C6 H39 . . . H 5 32.509 -33.597 -0.504 1 22.72 ? C6 H39 1215 A 1 
HETATM 7 C C7 H39 . . . H 5 32.756 -32.247 -0.263 1 22.42 ? C7 H39 1215 A 1 
HETATM 8 C C8 H39 . . . H 5 37.633 -32.932 -4.638 1 44.51 ? C8 H39 1215 A 1 
HETATM 9 C C9 H39 . . . H 5 31.842 -33.832 1.788 1 22.21 ? C9 H39 1215 A 1 
HETATM 10 C C10 H39 . . . H 5 32.059 -34.358 0.551 1 22.13 ? C10 H39 1215 A 1 
HETATM 11 C C11 H39 . . . H 5 32.708 -34.272 -1.813 1 22.71 ? C11 H39 1215 A 1 
HETATM 12 C C12 H39 . . . H 5 37.112 -32.121 -2.39 1 36.96 ? C12 H39 1215 A 1 
HETATM 13 C C13 H39 . . . H 5 31.091 -35.823 1.776 1 24.88 ? C13 H39 1215 A 1 
HETATM 14 C C14 H39 . . . H 5 33.021 -27.696 -1.183 1 25.75 ? C14 H39 1215 A 1 
HETATM 15 C C15 H39 . . . H 5 34.013 -27.46 -3.44 1 27.42 ? C15 H39 1215 A 1 
HETATM 16 C C16 H39 . . . H 5 37.344 -33.328 -3.251 1 41.13 ? C16 H39 1215 A 1 
HETATM 17 C C17 H39 . . . H 5 33.225 -31.297 -1.331 1 24.26 ? C17 H39 1215 A 1 
HETATM 18 C C18 H39 . . . H 5 34.666 -29.399 -2.059 1 25.76 ? C18 H39 1215 A 1 
HETATM 19 C C19 H39 . . . H 5 35.618 -31.207 -0.671 1 28.67 ? C19 H39 1215 A 1 
HETATM 20 C C20 H39 . . . H 5 33.523 -28.448 -2.399 1 25.87 ? C20 H39 1215 A 1 
HETATM 21 C C21 H39 . . . H 5 34.37 -30.384 -0.94 1 25.9 ? C21 H39 1215 A 1 
HETATM 22 N N22 H39 . . . H 5 38.714 -32.445 -6.521 1 49.87 ? N22 H39 1215 A 1 
HETATM 23 N N23 H39 . . . H 5 35.901 -32.153 -1.726 1 30.77 ? N23 H39 1215 A 1 
HETATM 24 O O24 H39 . . . H 5 31.761 -34.976 -2.266 1 21.64 ? O24 H39 1215 A 1 
HETATM 25 O O25 H39 . . . H 5 33.837 -34.12 -2.361 1 23.55 ? O25 H39 1215 A 1 
HETATM 26 O O26 H39 . . . H 5 37.944 -31.23 -2.313 1 36.48 ? O26 H39 1215 A 1 
HETATM 27 O O27 H39 . . . H 5 31.379 -34.749 2.683 1 23.18 ? O27 H39 1215 A 1 
HETATM 28 O O28 H39 . . . H 5 31.754 -35.693 0.509 1 23.8 ? O28 H39 1215 A 1 
#
_model_server_stats.io_time_ms              7 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    20 
_model_server_stats.query_time_ms           299 
_model_server_stats.encode_time_ms          8 
_model_server_stats.element_count           28 
#