data_4CNG # _model_server_result.job_id Us9vVGsP4C361NDSvPG1Qg _model_server_result.datetime_utc '2025-06-22 20:52:15' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4cng # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":1158}' # _entry.id 4CNG # _exptl.entry_id 4CNG _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 384.411 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description S-ADENOSYL-L-HOMOCYSTEINE _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4CNG _cell.length_a 45.803 _cell.length_b 54.097 _cell.length_c 130.637 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4CNG _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 F N N # _chem_comp.formula 'C14 H20 N6 O5 S' _chem_comp.formula_weight 384.411 _chem_comp.id SAH _chem_comp.mon_nstd_flag n _chem_comp.name S-ADENOSYL-L-HOMOCYSTEINE _chem_comp.type 'l-peptide linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N CA SAH sing 271 n n N HN1 SAH sing 272 n n N HN2 SAH sing 273 n n CA CB SAH sing 274 n n CA C SAH sing 275 n n CA HA SAH sing 276 n n CB CG SAH sing 277 n n CB HB1 SAH sing 278 n n CB HB2 SAH sing 279 n n CG SD SAH sing 280 n n CG HG1 SAH sing 281 n n CG HG2 SAH sing 282 n n SD C5' SAH sing 283 n n C O SAH doub 284 n n C OXT SAH sing 285 n n OXT HXT SAH sing 286 n n C5' C4' SAH sing 287 n n C5' "H5'1" SAH sing 288 n n C5' "H5'2" SAH sing 289 n n C4' O4' SAH sing 290 n n C4' C3' SAH sing 291 n n C4' H4' SAH sing 292 n n O4' C1' SAH sing 293 n n C3' O3' SAH sing 294 n n C3' C2' SAH sing 295 n n C3' H3' SAH sing 296 n n O3' HO3' SAH sing 297 n n C2' O2' SAH sing 298 n n C2' C1' SAH sing 299 n n C2' H2' SAH sing 300 n n O2' HO2' SAH sing 301 n n C1' N9 SAH sing 302 n n C1' H1' SAH sing 303 n n N9 C8 SAH sing 304 n y N9 C4 SAH sing 305 n y C8 N7 SAH doub 306 n y C8 H8 SAH sing 307 n n N7 C5 SAH sing 308 n y C5 C6 SAH sing 309 n y C5 C4 SAH doub 310 n y C6 N6 SAH sing 311 n n C6 N1 SAH doub 312 n y N6 HN61 SAH sing 313 n n N6 HN62 SAH sing 314 n n N1 C2 SAH sing 315 n y C2 N3 SAH doub 316 n y C2 H2 SAH sing 317 n n N3 C4 SAH sing 318 n y # _atom_sites.entry_id 4CNG _atom_sites.fract_transf_matrix[1][1] 0.021833 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018485 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007655 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 SAH A 1 1157 1157 SAH SAH . D 2 SAH A 1 1158 1158 SAH SAH . E 3 GOL B 1 1157 1157 GOL GOL . F 2 SAH B 1 1158 1158 SAH SAH . G 4 HOH A 1 2001 2001 HOH HOH . G 4 HOH A 2 2002 2002 HOH HOH . G 4 HOH A 3 2003 2003 HOH HOH . G 4 HOH A 4 2004 2004 HOH HOH . G 4 HOH A 5 2005 2005 HOH HOH . G 4 HOH A 6 2006 2006 HOH HOH . G 4 HOH A 7 2007 2007 HOH HOH . G 4 HOH A 8 2008 2008 HOH HOH . G 4 HOH A 9 2009 2009 HOH HOH . G 4 HOH A 10 2010 2010 HOH HOH . G 4 HOH A 11 2011 2011 HOH HOH . G 4 HOH A 12 2012 2012 HOH HOH . G 4 HOH A 13 2013 2013 HOH HOH . G 4 HOH A 14 2014 2014 HOH HOH . G 4 HOH A 15 2015 2015 HOH HOH . G 4 HOH A 16 2016 2016 HOH HOH . G 4 HOH A 17 2017 2017 HOH HOH . G 4 HOH A 18 2018 2018 HOH HOH . G 4 HOH A 19 2019 2019 HOH HOH . G 4 HOH A 20 2020 2020 HOH HOH . G 4 HOH A 21 2021 2021 HOH HOH . G 4 HOH A 22 2022 2022 HOH HOH . G 4 HOH A 23 2023 2023 HOH HOH . G 4 HOH A 24 2024 2024 HOH HOH . G 4 HOH A 25 2025 2025 HOH HOH . G 4 HOH A 26 2026 2026 HOH HOH . G 4 HOH A 27 2027 2027 HOH HOH . G 4 HOH A 28 2028 2028 HOH HOH . G 4 HOH A 29 2029 2029 HOH HOH . G 4 HOH A 30 2030 2030 HOH HOH . G 4 HOH A 31 2031 2031 HOH HOH . G 4 HOH A 32 2032 2032 HOH HOH . G 4 HOH A 33 2033 2033 HOH HOH . G 4 HOH A 34 2034 2034 HOH HOH . G 4 HOH A 35 2035 2035 HOH HOH . G 4 HOH A 36 2036 2036 HOH HOH . G 4 HOH A 37 2037 2037 HOH HOH . G 4 HOH A 38 2038 2038 HOH HOH . G 4 HOH A 39 2039 2039 HOH HOH . G 4 HOH A 40 2040 2040 HOH HOH . G 4 HOH A 41 2041 2041 HOH HOH . G 4 HOH A 42 2042 2042 HOH HOH . G 4 HOH A 43 2043 2043 HOH HOH . G 4 HOH A 44 2044 2044 HOH HOH . G 4 HOH A 45 2045 2045 HOH HOH . G 4 HOH A 46 2046 2046 HOH HOH . G 4 HOH A 47 2047 2047 HOH HOH . G 4 HOH A 48 2048 2048 HOH HOH . G 4 HOH A 49 2049 2049 HOH HOH . G 4 HOH A 50 2050 2050 HOH HOH . G 4 HOH A 51 2051 2051 HOH HOH . H 4 HOH B 1 2001 2001 HOH HOH . H 4 HOH B 2 2002 2002 HOH HOH . H 4 HOH B 3 2003 2003 HOH HOH . H 4 HOH B 4 2004 2004 HOH HOH . H 4 HOH B 5 2005 2005 HOH HOH . H 4 HOH B 6 2006 2006 HOH HOH . H 4 HOH B 7 2007 2007 HOH HOH . H 4 HOH B 8 2008 2008 HOH HOH . H 4 HOH B 9 2009 2009 HOH HOH . H 4 HOH B 10 2010 2010 HOH HOH . H 4 HOH B 11 2011 2011 HOH HOH . H 4 HOH B 12 2012 2012 HOH HOH . H 4 HOH B 13 2013 2013 HOH HOH . H 4 HOH B 14 2014 2014 HOH HOH . H 4 HOH B 15 2015 2015 HOH HOH . H 4 HOH B 16 2016 2016 HOH HOH . H 4 HOH B 17 2017 2017 HOH HOH . H 4 HOH B 18 2018 2018 HOH HOH . H 4 HOH B 19 2019 2019 HOH HOH . H 4 HOH B 20 2020 2020 HOH HOH . H 4 HOH B 21 2021 2021 HOH HOH . H 4 HOH B 22 2022 2022 HOH HOH . H 4 HOH B 23 2023 2023 HOH HOH . H 4 HOH B 24 2024 2024 HOH HOH . H 4 HOH B 25 2025 2025 HOH HOH . H 4 HOH B 26 2026 2026 HOH HOH . H 4 HOH B 27 2027 2027 HOH HOH . H 4 HOH B 28 2028 2028 HOH HOH . H 4 HOH B 29 2029 2029 HOH HOH . H 4 HOH B 30 2030 2030 HOH HOH . H 4 HOH B 31 2031 2031 HOH HOH . H 4 HOH B 32 2032 2032 HOH HOH . H 4 HOH B 33 2033 2033 HOH HOH . H 4 HOH B 34 2034 2034 HOH HOH . H 4 HOH B 35 2035 2035 HOH HOH . H 4 HOH B 36 2036 2036 HOH HOH . H 4 HOH B 37 2037 2037 HOH HOH . H 4 HOH B 38 2038 2038 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N SAH . . . F 2 -26.758 -47.941 158.149 1 42.23 ? N SAH 1158 B 1 HETATM 2 C CA SAH . . . F 2 -28.095 -48.576 157.997 1 31.17 ? CA SAH 1158 B 1 HETATM 3 C CB SAH . . . F 2 -28.865 -47.764 156.977 1 20.66 ? CB SAH 1158 B 1 HETATM 4 C CG SAH . . . F 2 -30.375 -47.913 157.129 1 18.11 ? CG SAH 1158 B 1 HETATM 5 S SD SAH . . . F 2 -31.242 -46.611 156.286 1 14.16 ? SD SAH 1158 B 1 HETATM 6 C C SAH . . . F 2 -27.942 -50.035 157.612 1 38.4 ? C SAH 1158 B 1 HETATM 7 O O SAH . . . F 2 -27.051 -50.735 158.113 1 43 ? O SAH 1158 B 1 HETATM 8 O OXT SAH . . . F 2 -28.671 -50.564 156.764 1 36.71 ? OXT SAH 1158 B 1 HETATM 9 C C5' SAH . . . F 2 -32.881 -47.039 156.844 1 12.76 ? C5' SAH 1158 B 1 HETATM 10 C C4' SAH . . . F 2 -33.782 -47.661 155.8 1 10.13 ? C4' SAH 1158 B 1 HETATM 11 O O4' SAH . . . F 2 -33.997 -46.746 154.742 1 10.84 ? O4' SAH 1158 B 1 HETATM 12 C C3' SAH . . . F 2 -33.238 -48.92 155.098 1 10.53 ? C3' SAH 1158 B 1 HETATM 13 O O3' SAH . . . F 2 -33.419 -50.055 155.923 1 11.78 ? O3' SAH 1158 B 1 HETATM 14 C C2' SAH . . . F 2 -34.077 -48.934 153.809 1 9.72 ? C2' SAH 1158 B 1 HETATM 15 O O2' SAH . . . F 2 -35.378 -49.407 154.124 1 10.4 ? O2' SAH 1158 B 1 HETATM 16 C C1' SAH . . . F 2 -34.149 -47.414 153.531 1 9.61 ? C1' SAH 1158 B 1 HETATM 17 N N9 SAH . . . F 2 -33.115 -46.974 152.59 1 10.23 ? N9 SAH 1158 B 1 HETATM 18 C C8 SAH . . . F 2 -32.158 -46.023 152.797 1 10.36 ? C8 SAH 1158 B 1 HETATM 19 N N7 SAH . . . F 2 -31.501 -45.732 151.666 1 11.49 ? N7 SAH 1158 B 1 HETATM 20 C C5 SAH . . . F 2 -32.046 -46.487 150.704 1 10.82 ? C5 SAH 1158 B 1 HETATM 21 C C6 SAH . . . F 2 -31.879 -46.595 149.294 1 11.75 ? C6 SAH 1158 B 1 HETATM 22 N N6 SAH . . . F 2 -30.952 -45.892 148.617 1 12.26 ? N6 SAH 1158 B 1 HETATM 23 N N1 SAH . . . F 2 -32.667 -47.438 148.626 1 12.66 ? N1 SAH 1158 B 1 HETATM 24 C C2 SAH . . . F 2 -33.593 -48.146 149.278 1 12.97 ? C2 SAH 1158 B 1 HETATM 25 N N3 SAH . . . F 2 -33.893 -48.113 150.575 1 11.53 ? N3 SAH 1158 B 1 HETATM 26 C C4 SAH . . . F 2 -33.121 -47.281 151.294 1 10.69 ? C4 SAH 1158 B 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 240 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 26 #