data_4COX
#
_model_server_result.job_id            rP26nvu0OSGNcrqA84n8Xw 
_model_server_result.datetime_utc      '2024-11-04 22:58:55' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4cox 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"I","auth_seq_id":701}' 
#
_entry.id    4COX 
#
_exptl.entry_id    4COX 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              357.788 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            INDOMETHACIN 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            4COX 
_cell.length_a            179.8 
_cell.length_b            133.6 
_cell.length_c            118.4 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4COX 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        18 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 21 21 2' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,E,F,G,H,I,J,K,L,M,N 1 1 
C,D,O,P,Q,R,S,T,U,V,W,X 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 I N N 
? 4 N N N 
? 4 S N N 
? 4 X N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 4 A CYS 36 1_555 A SG CYS 15 A CYS 47 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.057 ? 
disulf ? disulf2 A SG CYS 5 A CYS 37 1_555 A SG CYS 128 A CYS 159 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? 
disulf ? disulf3 A SG CYS 9 A CYS 41 1_555 A SG CYS 25 A CYS 57 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.014 ? 
disulf ? disulf4 A SG CYS 27 A CYS 59 1_555 A SG CYS 37 A CYS 69 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
disulf ? disulf5 A SG CYS 538 A CYS 569 1_555 A SG CYS 544 A CYS 575 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
disulf ? disulf6 B SG CYS 4 B CYS 36 1_555 B SG CYS 15 B CYS 47 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? 
disulf ? disulf7 B SG CYS 5 B CYS 37 1_555 B SG CYS 128 B CYS 159 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
disulf ? disulf8 B SG CYS 9 B CYS 41 1_555 B SG CYS 25 B CYS 57 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.049 ? 
disulf ? disulf9 B SG CYS 27 B CYS 59 1_555 B SG CYS 37 B CYS 69 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? 
disulf ? disulf10 B SG CYS 538 B CYS 569 1_555 B SG CYS 544 B CYS 575 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
disulf ? disulf11 C SG CYS 4 C CYS 36 1_555 C SG CYS 15 C CYS 47 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? 
disulf ? disulf12 C SG CYS 5 C CYS 37 1_555 C SG CYS 128 C CYS 159 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.012 ? 
disulf ? disulf13 C SG CYS 9 C CYS 41 1_555 C SG CYS 25 C CYS 57 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.014 ? 
disulf ? disulf14 C SG CYS 27 C CYS 59 1_555 C SG CYS 37 C CYS 69 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? 
disulf ? disulf15 C SG CYS 538 C CYS 569 1_555 C SG CYS 544 C CYS 575 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? 
disulf ? disulf16 D SG CYS 4 D CYS 36 1_555 D SG CYS 15 D CYS 47 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? 
disulf ? disulf17 D SG CYS 5 D CYS 37 1_555 D SG CYS 128 D CYS 159 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.017 ? 
disulf ? disulf18 D SG CYS 9 D CYS 41 1_555 D SG CYS 25 D CYS 57 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? 
disulf ? disulf19 D SG CYS 27 D CYS 59 1_555 D SG CYS 37 D CYS 69 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? 
disulf ? disulf20 D SG CYS 538 D CYS 569 1_555 D SG CYS 544 D CYS 575 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? 
covale ? covale1 A ND2 ASN 36 A ASN 68 1_555 E C1 NAG . A NAG 661 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.45 ? 
covale ? covale2 A ND2 ASN 113 A ASN 144 1_555 F C1 NAG . A NAG 671 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.466 ? 
covale ? covale3 A ND2 ASN 379 A ASN 410 1_555 G C1 NAG . A NAG 681 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.452 ? 
covale ? covale4 B ND2 ASN 36 B ASN 68 1_555 J C1 NAG . B NAG 661 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.454 ? 
covale ? covale5 B ND2 ASN 113 B ASN 144 1_555 K C1 NAG . B NAG 671 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.444 ? 
covale ? covale6 B ND2 ASN 379 B ASN 410 1_555 L C1 NAG . B NAG 681 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.457 ? 
covale ? covale7 C ND2 ASN 36 C ASN 68 1_555 O C1 NAG . C NAG 661 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.438 ? 
covale ? covale8 C ND2 ASN 113 C ASN 144 1_555 P C1 NAG . C NAG 671 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.459 ? 
covale ? covale9 C ND2 ASN 379 C ASN 410 1_555 Q C1 NAG . C NAG 681 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.436 ? 
covale ? covale10 D ND2 ASN 36 D ASN 68 1_555 T C1 NAG . D NAG 661 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.488 ? 
covale ? covale11 D ND2 ASN 113 D ASN 144 1_555 U C1 NAG . D NAG 671 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.456 ? 
covale ? covale12 D ND2 ASN 379 D ASN 410 1_555 V C1 NAG . D NAG 681 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.458 ? 
metalc ? metalc1 A NE2 HIS 357 A HIS 388 1_555 H FE HEM . A HEM 682 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.203 ? 
metalc ? metalc2 B NE2 HIS 357 B HIS 388 1_555 M FE HEM . B HEM 682 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.245 ? 
metalc ? metalc3 C NE2 HIS 357 C HIS 388 1_555 R FE HEM . C HEM 682 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.173 ? 
metalc ? metalc4 D NE2 HIS 357 D HIS 388 1_555 W FE HEM . D HEM 682 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.236 ? 
#
_chem_comp.formula           'C19 H16 Cl N O4' 
_chem_comp.formula_weight    357.788 
_chem_comp.id                IMN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              INDOMETHACIN 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C C1 IMN doub 253 n y 
C C5 IMN sing 254 n y 
C N IMN sing 255 n y 
C1 C2 IMN sing 256 n y 
C1 C7 IMN sing 257 n y 
C2 C3 IMN doub 258 n y 
C2 H2 IMN sing 259 n n 
C3 C4 IMN sing 260 n y 
C3 O IMN sing 261 n n 
C4 C5 IMN doub 262 n y 
C4 H4 IMN sing 263 n n 
C5 H5 IMN sing 264 n n 
C6 O IMN sing 265 n n 
C6 H61 IMN sing 266 n n 
C6 H62 IMN sing 267 n n 
C6 H63 IMN sing 268 n n 
C7 C8 IMN doub 269 n y 
C7 C17 IMN sing 270 n n 
C8 C16 IMN sing 271 n n 
C8 N IMN sing 272 n y 
C9 C10 IMN sing 273 n n 
C9 N IMN sing 274 n n 
C9 O1 IMN doub 275 n n 
C10 C11 IMN doub 276 n y 
C10 C15 IMN sing 277 n y 
C11 C12 IMN sing 278 n y 
C11 H11 IMN sing 279 n n 
C12 C13 IMN doub 280 n y 
C12 H12 IMN sing 281 n n 
C13 C14 IMN sing 282 n y 
C13 CL IMN sing 283 n n 
C14 C15 IMN doub 284 n y 
C14 H14 IMN sing 285 n n 
C15 H15 IMN sing 286 n n 
C16 H161 IMN sing 287 n n 
C16 H162 IMN sing 288 n n 
C16 H163 IMN sing 289 n n 
C17 C18 IMN sing 290 n n 
C17 H171 IMN sing 291 n n 
C17 H172 IMN sing 292 n n 
C18 O2 IMN doub 293 n n 
C18 O3 IMN sing 294 n n 
O3 HO3 IMN sing 295 n n 
#
_atom_sites.entry_id                     4COX 
_atom_sites.fract_transf_matrix[1][1]    0.005562 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.007485 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.008446 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 NAG A 1 661 661 NAG NAG . 
F 2 NAG A 1 671 671 NAG NAG . 
G 2 NAG A 1 681 681 NAG NAG . 
H 3 HEM A 1 682 601 HEM HEM . 
I 4 IMN A 1 701 701 IMN IMN . 
J 2 NAG B 1 661 661 NAG NAG . 
K 2 NAG B 1 671 671 NAG NAG . 
L 2 NAG B 1 681 681 NAG NAG . 
M 3 HEM B 1 682 601 HEM HEM . 
N 4 IMN B 1 701 701 IMN IMN . 
O 2 NAG C 1 661 661 NAG NAG . 
P 2 NAG C 1 671 671 NAG NAG . 
Q 2 NAG C 1 681 681 NAG NAG . 
R 3 HEM C 1 682 601 HEM HEM . 
S 4 IMN C 1 701 701 IMN IMN . 
T 2 NAG D 1 661 661 NAG NAG . 
U 2 NAG D 1 671 671 NAG NAG . 
V 2 NAG D 1 681 681 NAG NAG . 
W 3 HEM D 1 682 601 HEM HEM . 
X 4 IMN D 1 701 701 IMN IMN . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C IMN . . . I 4 24.43 22.562 15.729 1 19.67 ? C IMN 701 A 1 
HETATM 2 C C1 IMN . . . I 4 24.613 21.627 16.766 1 19.79 ? C1 IMN 701 A 1 
HETATM 3 C C2 IMN . . . I 4 23.484 20.976 17.348 1 21.07 ? C2 IMN 701 A 1 
HETATM 4 C C3 IMN . . . I 4 22.161 21.258 16.9 1 22.88 ? C3 IMN 701 A 1 
HETATM 5 C C4 IMN . . . I 4 21.965 22.213 15.837 1 21.63 ? C4 IMN 701 A 1 
HETATM 6 C C5 IMN . . . I 4 23.1 22.863 15.255 1 20.9 ? C5 IMN 701 A 1 
HETATM 7 C C6 IMN . . . I 4 19.738 21.03 17.177 1 18.67 ? C6 IMN 701 A 1 
HETATM 8 C C7 IMN . . . I 4 26.113 21.561 16.993 1 22.25 ? C7 IMN 701 A 1 
HETATM 9 C C8 IMN . . . I 4 26.683 22.412 16.137 1 20.03 ? C8 IMN 701 A 1 
HETATM 10 C C9 IMN . . . I 4 26.023 24.019 14.517 1 15.58 ? C9 IMN 701 A 1 
HETATM 11 C C10 IMN . . . I 4 25.603 23.987 13.058 1 12.16 ? C10 IMN 701 A 1 
HETATM 12 C C11 IMN . . . I 4 25.613 25.184 12.313 1 10.82 ? C11 IMN 701 A 1 
HETATM 13 C C12 IMN . . . I 4 25.24 25.199 10.954 1 6.47 ? C12 IMN 701 A 1 
HETATM 14 C C13 IMN . . . I 4 24.864 24.048 10.33 1 5.21 ? C13 IMN 701 A 1 
HETATM 15 C C14 IMN . . . I 4 24.841 22.853 11.052 1 9.11 ? C14 IMN 701 A 1 
HETATM 16 C C15 IMN . . . I 4 25.217 22.822 12.434 1 11.28 ? C15 IMN 701 A 1 
HETATM 17 C C16 IMN . . . I 4 28.145 22.638 16.044 1 21.01 ? C16 IMN 701 A 1 
HETATM 18 C C17 IMN . . . I 4 26.876 20.721 18.062 1 21.3 ? C17 IMN 701 A 1 
HETATM 19 C C18 IMN . . . I 4 26.328 19.297 18.195 1 19.93 ? C18 IMN 701 A 1 
HETATM 20 N N IMN . . . I 4 25.75 23.043 15.371 1 18.94 ? N IMN 701 A 1 
HETATM 21 O O IMN . . . I 4 21.06 20.603 17.514 1 19.7 ? O IMN 701 A 1 
HETATM 22 O O1 IMN . . . I 4 26.627 24.982 14.945 1 13.03 ? O1 IMN 701 A 1 
HETATM 23 O O2 IMN . . . I 4 25.503 18.865 17.426 1 20.97 ? O2 IMN 701 A 1 
HETATM 24 O O3 IMN . . . I 4 26.753 18.534 19.135 1 18.57 ? O3 IMN 701 A 1 
HETATM 25 CL CL IMN . . . I 4 24.488 24.069 8.649 1 2.06 ? CL IMN 701 A 1 
#
_model_server_stats.io_time_ms              20 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    20 
_model_server_stats.query_time_ms           291 
_model_server_stats.encode_time_ms          7 
_model_server_stats.element_count           25 
#