data_4COX # _model_server_result.job_id 21wNMipg7x9RRpK7_ZORXg _model_server_result.datetime_utc '2024-11-27 02:12:47' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4cox # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"S","auth_seq_id":701}' # _entry.id 4COX # _exptl.entry_id 4COX _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 357.788 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description INDOMETHACIN _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4COX _cell.length_a 179.8 _cell.length_b 133.6 _cell.length_c 118.4 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4COX _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,F,G,H,I,J,K,L,M,N 1 1 C,D,O,P,Q,R,S,T,U,V,W,X 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 I N N ? 4 N N N ? 4 S N N ? 4 X N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 4 A CYS 36 1_555 A SG CYS 15 A CYS 47 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.057 ? disulf ? disulf2 A SG CYS 5 A CYS 37 1_555 A SG CYS 128 A CYS 159 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf3 A SG CYS 9 A CYS 41 1_555 A SG CYS 25 A CYS 57 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.014 ? disulf ? disulf4 A SG CYS 27 A CYS 59 1_555 A SG CYS 37 A CYS 69 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf5 A SG CYS 538 A CYS 569 1_555 A SG CYS 544 A CYS 575 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf6 B SG CYS 4 B CYS 36 1_555 B SG CYS 15 B CYS 47 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? disulf ? disulf7 B SG CYS 5 B CYS 37 1_555 B SG CYS 128 B CYS 159 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf8 B SG CYS 9 B CYS 41 1_555 B SG CYS 25 B CYS 57 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.049 ? disulf ? disulf9 B SG CYS 27 B CYS 59 1_555 B SG CYS 37 B CYS 69 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? disulf ? disulf10 B SG CYS 538 B CYS 569 1_555 B SG CYS 544 B CYS 575 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf11 C SG CYS 4 C CYS 36 1_555 C SG CYS 15 C CYS 47 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? disulf ? disulf12 C SG CYS 5 C CYS 37 1_555 C SG CYS 128 C CYS 159 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.012 ? disulf ? disulf13 C SG CYS 9 C CYS 41 1_555 C SG CYS 25 C CYS 57 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.014 ? disulf ? disulf14 C SG CYS 27 C CYS 59 1_555 C SG CYS 37 C CYS 69 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf15 C SG CYS 538 C CYS 569 1_555 C SG CYS 544 C CYS 575 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? disulf ? disulf16 D SG CYS 4 D CYS 36 1_555 D SG CYS 15 D CYS 47 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf17 D SG CYS 5 D CYS 37 1_555 D SG CYS 128 D CYS 159 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.017 ? disulf ? disulf18 D SG CYS 9 D CYS 41 1_555 D SG CYS 25 D CYS 57 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? disulf ? disulf19 D SG CYS 27 D CYS 59 1_555 D SG CYS 37 D CYS 69 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf20 D SG CYS 538 D CYS 569 1_555 D SG CYS 544 D CYS 575 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? covale ? covale1 A ND2 ASN 36 A ASN 68 1_555 E C1 NAG . A NAG 661 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.45 ? covale ? covale2 A ND2 ASN 113 A ASN 144 1_555 F C1 NAG . A NAG 671 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.466 ? covale ? covale3 A ND2 ASN 379 A ASN 410 1_555 G C1 NAG . A NAG 681 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.452 ? covale ? covale4 B ND2 ASN 36 B ASN 68 1_555 J C1 NAG . B NAG 661 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.454 ? covale ? covale5 B ND2 ASN 113 B ASN 144 1_555 K C1 NAG . B NAG 671 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.444 ? covale ? covale6 B ND2 ASN 379 B ASN 410 1_555 L C1 NAG . B NAG 681 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.457 ? covale ? covale7 C ND2 ASN 36 C ASN 68 1_555 O C1 NAG . C NAG 661 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.438 ? covale ? covale8 C ND2 ASN 113 C ASN 144 1_555 P C1 NAG . C NAG 671 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.459 ? covale ? covale9 C ND2 ASN 379 C ASN 410 1_555 Q C1 NAG . C NAG 681 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.436 ? covale ? covale10 D ND2 ASN 36 D ASN 68 1_555 T C1 NAG . D NAG 661 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.488 ? covale ? covale11 D ND2 ASN 113 D ASN 144 1_555 U C1 NAG . D NAG 671 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.456 ? covale ? covale12 D ND2 ASN 379 D ASN 410 1_555 V C1 NAG . D NAG 681 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.458 ? metalc ? metalc1 A NE2 HIS 357 A HIS 388 1_555 H FE HEM . A HEM 682 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.203 ? metalc ? metalc2 B NE2 HIS 357 B HIS 388 1_555 M FE HEM . B HEM 682 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.245 ? metalc ? metalc3 C NE2 HIS 357 C HIS 388 1_555 R FE HEM . C HEM 682 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.173 ? metalc ? metalc4 D NE2 HIS 357 D HIS 388 1_555 W FE HEM . D HEM 682 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.236 ? # _chem_comp.formula 'C19 H16 Cl N O4' _chem_comp.formula_weight 357.788 _chem_comp.id IMN _chem_comp.mon_nstd_flag . _chem_comp.name INDOMETHACIN _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C C1 IMN doub 253 n y C C5 IMN sing 254 n y C N IMN sing 255 n y C1 C2 IMN sing 256 n y C1 C7 IMN sing 257 n y C2 C3 IMN doub 258 n y C2 H2 IMN sing 259 n n C3 C4 IMN sing 260 n y C3 O IMN sing 261 n n C4 C5 IMN doub 262 n y C4 H4 IMN sing 263 n n C5 H5 IMN sing 264 n n C6 O IMN sing 265 n n C6 H61 IMN sing 266 n n C6 H62 IMN sing 267 n n C6 H63 IMN sing 268 n n C7 C8 IMN doub 269 n y C7 C17 IMN sing 270 n n C8 C16 IMN sing 271 n n C8 N IMN sing 272 n y C9 C10 IMN sing 273 n n C9 N IMN sing 274 n n C9 O1 IMN doub 275 n n C10 C11 IMN doub 276 n y C10 C15 IMN sing 277 n y C11 C12 IMN sing 278 n y C11 H11 IMN sing 279 n n C12 C13 IMN doub 280 n y C12 H12 IMN sing 281 n n C13 C14 IMN sing 282 n y C13 CL IMN sing 283 n n C14 C15 IMN doub 284 n y C14 H14 IMN sing 285 n n C15 H15 IMN sing 286 n n C16 H161 IMN sing 287 n n C16 H162 IMN sing 288 n n C16 H163 IMN sing 289 n n C17 C18 IMN sing 290 n n C17 H171 IMN sing 291 n n C17 H172 IMN sing 292 n n C18 O2 IMN doub 293 n n C18 O3 IMN sing 294 n n O3 HO3 IMN sing 295 n n # _atom_sites.entry_id 4COX _atom_sites.fract_transf_matrix[1][1] 0.005562 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007485 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008446 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 NAG A 1 661 661 NAG NAG . F 2 NAG A 1 671 671 NAG NAG . G 2 NAG A 1 681 681 NAG NAG . H 3 HEM A 1 682 601 HEM HEM . I 4 IMN A 1 701 701 IMN IMN . J 2 NAG B 1 661 661 NAG NAG . K 2 NAG B 1 671 671 NAG NAG . L 2 NAG B 1 681 681 NAG NAG . M 3 HEM B 1 682 601 HEM HEM . N 4 IMN B 1 701 701 IMN IMN . O 2 NAG C 1 661 661 NAG NAG . P 2 NAG C 1 671 671 NAG NAG . Q 2 NAG C 1 681 681 NAG NAG . R 3 HEM C 1 682 601 HEM HEM . S 4 IMN C 1 701 701 IMN IMN . T 2 NAG D 1 661 661 NAG NAG . U 2 NAG D 1 671 671 NAG NAG . V 2 NAG D 1 681 681 NAG NAG . W 3 HEM D 1 682 601 HEM HEM . X 4 IMN D 1 701 701 IMN IMN . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C IMN . . . S 4 60.214 43.705 74.033 1 20.47 ? C IMN 701 C 1 HETATM 2 C C1 IMN . . . S 4 60.167 44.692 75.051 1 19.57 ? C1 IMN 701 C 1 HETATM 3 C C2 IMN . . . S 4 61.37 45.2 75.611 1 21.83 ? C2 IMN 701 C 1 HETATM 4 C C3 IMN . . . S 4 62.642 44.731 75.152 1 23.61 ? C3 IMN 701 C 1 HETATM 5 C C4 IMN . . . S 4 62.704 43.719 74.114 1 24.35 ? C4 IMN 701 C 1 HETATM 6 C C5 IMN . . . S 4 61.484 43.213 73.556 1 22.03 ? C5 IMN 701 C 1 HETATM 7 C C6 IMN . . . S 4 65.098 44.712 75.33 1 23.01 ? C6 IMN 701 C 1 HETATM 8 C C7 IMN . . . S 4 58.705 44.96 75.282 1 22.51 ? C7 IMN 701 C 1 HETATM 9 C C8 IMN . . . S 4 58.02 44.17 74.448 1 21.44 ? C8 IMN 701 C 1 HETATM 10 C C9 IMN . . . S 4 58.435 42.451 72.857 1 18.18 ? C9 IMN 701 C 1 HETATM 11 C C10 IMN . . . S 4 58.848 42.389 71.382 1 15.05 ? C10 IMN 701 C 1 HETATM 12 C C11 IMN . . . S 4 58.673 41.182 70.661 1 15.18 ? C11 IMN 701 C 1 HETATM 13 C C12 IMN . . . S 4 59.039 41.088 69.295 1 10.13 ? C12 IMN 701 C 1 HETATM 14 C C13 IMN . . . S 4 59.564 42.162 68.654 1 5.01 ? C13 IMN 701 C 1 HETATM 15 C C14 IMN . . . S 4 59.751 43.348 69.337 1 9.86 ? C14 IMN 701 C 1 HETATM 16 C C15 IMN . . . S 4 59.39 43.476 70.721 1 14.35 ? C15 IMN 701 C 1 HETATM 17 C C16 IMN . . . S 4 56.509 44.131 74.368 1 21.96 ? C16 IMN 701 C 1 HETATM 18 C C17 IMN . . . S 4 58.056 45.941 76.31 1 22.13 ? C17 IMN 701 C 1 HETATM 19 C C18 IMN . . . S 4 58.801 47.27 76.422 1 20.15 ? C18 IMN 701 C 1 HETATM 20 N N IMN . . . S 4 58.855 43.404 73.694 1 20.24 ? N IMN 701 C 1 HETATM 21 O O IMN . . . S 4 63.805 45.271 75.699 1 21.72 ? O IMN 701 C 1 HETATM 22 O O1 IMN . . . S 4 57.679 41.588 73.314 1 16.64 ? O1 IMN 701 C 1 HETATM 23 O O2 IMN . . . S 4 59.697 47.562 75.647 1 21.61 ? O2 IMN 701 C 1 HETATM 24 O O3 IMN . . . S 4 58.474 48.117 77.354 1 18.53 ? O3 IMN 701 C 1 HETATM 25 CL CL IMN . . . S 4 59.924 42.053 66.997 1 3.06 ? CL IMN 701 C 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 21 _model_server_stats.query_time_ms 289 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 25 #