data_4CQA # _model_server_result.job_id 5SJ9QfvIt4JnD6ctgwaTBA _model_server_result.datetime_utc '2024-11-28 06:45:16' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4cqa # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":800}' # _entry.id 4CQA # _exptl.entry_id 4CQA _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 456.344 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FLAVIN MONONUCLEOTIDE' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 107.91 _cell.angle_gamma 90 _cell.entry_id 4CQA _cell.length_a 52.95 _cell.length_b 166.41 _cell.length_c 63.16 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4CQA _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,I 1 1 B,F,G,H,J 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 F N N # _chem_comp.formula 'C17 H21 N4 O9 P' _chem_comp.formula_weight 456.344 _chem_comp.id FMN _chem_comp.mon_nstd_flag . _chem_comp.name 'FLAVIN MONONUCLEOTIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'RIBOFLAVIN MONOPHOSPHATE' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 FMN sing 83 n n N1 C10 FMN doub 84 n n C2 O2 FMN doub 85 n n C2 N3 FMN sing 86 n n N3 C4 FMN sing 87 n n N3 HN3 FMN sing 88 n n C4 O4 FMN doub 89 n n C4 C4A FMN sing 90 n n C4A N5 FMN doub 91 n n C4A C10 FMN sing 92 n n N5 C5A FMN sing 93 n n C5A C6 FMN doub 94 n y C5A C9A FMN sing 95 n y C6 C7 FMN sing 96 n y C6 H6 FMN sing 97 n n C7 C7M FMN sing 98 n n C7 C8 FMN doub 99 n y C7M HM71 FMN sing 100 n n C7M HM72 FMN sing 101 n n C7M HM73 FMN sing 102 n n C8 C8M FMN sing 103 n n C8 C9 FMN sing 104 n y C8M HM81 FMN sing 105 n n C8M HM82 FMN sing 106 n n C8M HM83 FMN sing 107 n n C9 C9A FMN doub 108 n y C9 H9 FMN sing 109 n n C9A N10 FMN sing 110 n n N10 C10 FMN sing 111 n n N10 C1' FMN sing 112 n n C1' C2' FMN sing 113 n n C1' "H1'1" FMN sing 114 n n C1' "H1'2" FMN sing 115 n n C2' O2' FMN sing 116 n n C2' C3' FMN sing 117 n n C2' H2' FMN sing 118 n n O2' HO2' FMN sing 119 n n C3' O3' FMN sing 120 n n C3' C4' FMN sing 121 n n C3' H3' FMN sing 122 n n O3' HO3' FMN sing 123 n n C4' O4' FMN sing 124 n n C4' C5' FMN sing 125 n n C4' H4' FMN sing 126 n n O4' HO4' FMN sing 127 n n C5' O5' FMN sing 128 n n C5' "H5'1" FMN sing 129 n n C5' "H5'2" FMN sing 130 n n O5' P FMN sing 131 n n P O1P FMN doub 132 n n P O2P FMN sing 133 n n P O3P FMN sing 134 n n O2P HOP2 FMN sing 135 n n O3P HOP3 FMN sing 136 n n # _atom_sites.entry_id 4CQA _atom_sites.fract_transf_matrix[1][1] 0.018886 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.006104 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006009 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016639 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 FMN A 1 800 800 FMN FMN . D 3 ORO A 1 900 900 ORO ORO . E 4 ID6 A 1 1000 1000 ID6 ID6 . F 2 FMN B 1 800 800 FMN FMN . G 3 ORO B 1 900 900 ORO ORO . H 4 ID6 B 1 1000 1000 ID6 ID6 . I 5 HOH A 1 2001 2001 HOH HOH . I 5 HOH A 2 2002 2002 HOH HOH . I 5 HOH A 3 2003 2003 HOH HOH . I 5 HOH A 4 2004 2004 HOH HOH . I 5 HOH A 5 2005 2005 HOH HOH . I 5 HOH A 6 2006 2006 HOH HOH . I 5 HOH A 7 2007 2007 HOH HOH . I 5 HOH A 8 2008 2008 HOH HOH . I 5 HOH A 9 2009 2009 HOH HOH . I 5 HOH A 10 2010 2010 HOH HOH . I 5 HOH A 11 2011 2011 HOH HOH . I 5 HOH A 12 2012 2012 HOH HOH . I 5 HOH A 13 2013 2013 HOH HOH . I 5 HOH A 14 2014 2014 HOH HOH . I 5 HOH A 15 2015 2015 HOH HOH . I 5 HOH A 16 2016 2016 HOH HOH . I 5 HOH A 17 2017 2017 HOH HOH . I 5 HOH A 18 2018 2018 HOH HOH . I 5 HOH A 19 2019 2019 HOH HOH . I 5 HOH A 20 2020 2020 HOH HOH . I 5 HOH A 21 2021 2021 HOH HOH . I 5 HOH A 22 2022 2022 HOH HOH . I 5 HOH A 23 2023 2023 HOH HOH . I 5 HOH A 24 2024 2024 HOH HOH . I 5 HOH A 25 2025 2025 HOH HOH . I 5 HOH A 26 2026 2026 HOH HOH . I 5 HOH A 27 2027 2027 HOH HOH . I 5 HOH A 28 2028 2028 HOH HOH . I 5 HOH A 29 2029 2029 HOH HOH . I 5 HOH A 30 2030 2030 HOH HOH . I 5 HOH A 31 2031 2031 HOH HOH . I 5 HOH A 32 2032 2032 HOH HOH . I 5 HOH A 33 2033 2033 HOH HOH . I 5 HOH A 34 2034 2034 HOH HOH . I 5 HOH A 35 2035 2035 HOH HOH . I 5 HOH A 36 2036 2036 HOH HOH . I 5 HOH A 37 2037 2037 HOH HOH . I 5 HOH A 38 2038 2038 HOH HOH . I 5 HOH A 39 2039 2039 HOH HOH . I 5 HOH A 40 2040 2040 HOH HOH . I 5 HOH A 41 2041 2041 HOH HOH . I 5 HOH A 42 2042 2042 HOH HOH . I 5 HOH A 43 2043 2043 HOH HOH . I 5 HOH A 44 2044 2044 HOH HOH . I 5 HOH A 45 2045 2045 HOH HOH . I 5 HOH A 46 2046 2046 HOH HOH . I 5 HOH A 47 2047 2047 HOH HOH . I 5 HOH A 48 2048 2048 HOH HOH . I 5 HOH A 49 2049 2049 HOH HOH . I 5 HOH A 50 2050 2050 HOH HOH . I 5 HOH A 51 2051 2051 HOH HOH . I 5 HOH A 52 2052 2052 HOH HOH . I 5 HOH A 53 2053 2053 HOH HOH . I 5 HOH A 54 2054 2054 HOH HOH . I 5 HOH A 55 2055 2055 HOH HOH . I 5 HOH A 56 2056 2056 HOH HOH . I 5 HOH A 57 2057 2057 HOH HOH . I 5 HOH A 58 2058 2058 HOH HOH . I 5 HOH A 59 2059 2059 HOH HOH . I 5 HOH A 60 2060 2060 HOH HOH . I 5 HOH A 61 2061 2061 HOH HOH . I 5 HOH A 62 2062 2062 HOH HOH . I 5 HOH A 63 2063 2063 HOH HOH . I 5 HOH A 64 2064 2064 HOH HOH . I 5 HOH A 65 2065 2065 HOH HOH . J 5 HOH B 1 2001 2001 HOH HOH . J 5 HOH B 2 2002 2002 HOH HOH . J 5 HOH B 3 2003 2003 HOH HOH . J 5 HOH B 4 2004 2004 HOH HOH . J 5 HOH B 5 2005 2005 HOH HOH . J 5 HOH B 6 2006 2006 HOH HOH . J 5 HOH B 7 2007 2007 HOH HOH . J 5 HOH B 8 2008 2008 HOH HOH . J 5 HOH B 9 2009 2009 HOH HOH . J 5 HOH B 10 2010 2010 HOH HOH . J 5 HOH B 11 2011 2011 HOH HOH . J 5 HOH B 12 2012 2012 HOH HOH . J 5 HOH B 13 2013 2013 HOH HOH . J 5 HOH B 14 2014 2014 HOH HOH . J 5 HOH B 15 2015 2015 HOH HOH . J 5 HOH B 16 2016 2016 HOH HOH . J 5 HOH B 17 2017 2017 HOH HOH . J 5 HOH B 18 2018 2018 HOH HOH . J 5 HOH B 19 2019 2019 HOH HOH . J 5 HOH B 20 2020 2020 HOH HOH . J 5 HOH B 21 2021 2021 HOH HOH . J 5 HOH B 22 2022 2022 HOH HOH . J 5 HOH B 23 2023 2023 HOH HOH . J 5 HOH B 24 2024 2024 HOH HOH . J 5 HOH B 25 2025 2025 HOH HOH . J 5 HOH B 26 2026 2026 HOH HOH . J 5 HOH B 27 2027 2027 HOH HOH . J 5 HOH B 28 2028 2028 HOH HOH . J 5 HOH B 29 2029 2029 HOH HOH . J 5 HOH B 30 2030 2030 HOH HOH . J 5 HOH B 31 2031 2031 HOH HOH . J 5 HOH B 32 2032 2032 HOH HOH . J 5 HOH B 33 2033 2033 HOH HOH . J 5 HOH B 34 2034 2034 HOH HOH . J 5 HOH B 35 2035 2035 HOH HOH . J 5 HOH B 36 2036 2036 HOH HOH . J 5 HOH B 37 2037 2037 HOH HOH . J 5 HOH B 38 2038 2038 HOH HOH . J 5 HOH B 39 2039 2039 HOH HOH . J 5 HOH B 40 2040 2040 HOH HOH . J 5 HOH B 41 2041 2041 HOH HOH . J 5 HOH B 42 2042 2042 HOH HOH . J 5 HOH B 43 2043 2043 HOH HOH . J 5 HOH B 44 2044 2044 HOH HOH . J 5 HOH B 45 2045 2045 HOH HOH . J 5 HOH B 46 2046 2046 HOH HOH . J 5 HOH B 47 2047 2047 HOH HOH . J 5 HOH B 48 2048 2048 HOH HOH . J 5 HOH B 49 2049 2049 HOH HOH . J 5 HOH B 50 2050 2050 HOH HOH . J 5 HOH B 51 2051 2051 HOH HOH . J 5 HOH B 52 2052 2052 HOH HOH . J 5 HOH B 53 2053 2053 HOH HOH . J 5 HOH B 54 2054 2054 HOH HOH . J 5 HOH B 55 2055 2055 HOH HOH . J 5 HOH B 56 2056 2056 HOH HOH . J 5 HOH B 57 2057 2057 HOH HOH . J 5 HOH B 58 2058 2058 HOH HOH . J 5 HOH B 59 2059 2059 HOH HOH . J 5 HOH B 60 2060 2060 HOH HOH . J 5 HOH B 61 2061 2061 HOH HOH . J 5 HOH B 62 2062 2062 HOH HOH . J 5 HOH B 63 2063 2063 HOH HOH . J 5 HOH B 64 2064 2064 HOH HOH . J 5 HOH B 65 2065 2065 HOH HOH . J 5 HOH B 66 2066 2066 HOH HOH . J 5 HOH B 67 2067 2067 HOH HOH . J 5 HOH B 68 2068 2068 HOH HOH . J 5 HOH B 69 2069 2069 HOH HOH . J 5 HOH B 70 2070 2070 HOH HOH . J 5 HOH B 71 2071 2071 HOH HOH . J 5 HOH B 72 2072 2072 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 FMN . . . C 2 -2.3 12.436 8.764 1 47.7 ? N1 FMN 800 A 1 HETATM 2 C C2 FMN . . . C 2 -1.533 11.369 8.387 1 47 ? C2 FMN 800 A 1 HETATM 3 O O2 FMN . . . C 2 -0.87 10.718 9.211 1 45.21 ? O2 FMN 800 A 1 HETATM 4 N N3 FMN . . . C 2 -1.482 11.003 7.051 1 48.13 ? N3 FMN 800 A 1 HETATM 5 C C4 FMN . . . C 2 -2.164 11.616 6.013 1 50.19 ? C4 FMN 800 A 1 HETATM 6 O O4 FMN . . . C 2 -1.981 11.242 4.855 1 52.58 ? O4 FMN 800 A 1 HETATM 7 C C4A FMN . . . C 2 -3.005 12.745 6.435 1 49.06 ? C4A FMN 800 A 1 HETATM 8 N N5 FMN . . . C 2 -3.684 13.388 5.522 1 49.15 ? N5 FMN 800 A 1 HETATM 9 C C5A FMN . . . C 2 -4.35 14.546 5.904 1 48.71 ? C5A FMN 800 A 1 HETATM 10 C C6 FMN . . . C 2 -5.029 15.281 4.928 1 50.11 ? C6 FMN 800 A 1 HETATM 11 C C7 FMN . . . C 2 -5.652 16.488 5.23 1 50.09 ? C7 FMN 800 A 1 HETATM 12 C C7M FMN . . . C 2 -6.363 17.239 4.137 1 54.07 ? C7M FMN 800 A 1 HETATM 13 C C8 FMN . . . C 2 -5.594 16.983 6.547 1 48.27 ? C8 FMN 800 A 1 HETATM 14 C C8M FMN . . . C 2 -6.22 18.305 6.907 1 48.55 ? C8M FMN 800 A 1 HETATM 15 C C9 FMN . . . C 2 -4.933 16.245 7.528 1 47.71 ? C9 FMN 800 A 1 HETATM 16 C C9A FMN . . . C 2 -4.317 15.025 7.228 1 46.6 ? C9A FMN 800 A 1 HETATM 17 N N10 FMN . . . C 2 -3.631 14.25 8.197 1 45.41 ? N10 FMN 800 A 1 HETATM 18 C C10 FMN . . . C 2 -2.977 13.104 7.837 1 46.92 ? C10 FMN 800 A 1 HETATM 19 C C1' FMN . . . C 2 -3.637 14.635 9.622 1 45.05 ? C1' FMN 800 A 1 HETATM 20 C C2' FMN . . . C 2 -2.48 15.572 9.958 1 44.68 ? C2' FMN 800 A 1 HETATM 21 O O2' FMN . . . C 2 -1.233 14.905 9.769 1 45.03 ? O2' FMN 800 A 1 HETATM 22 C C3' FMN . . . C 2 -2.583 16.13 11.378 1 44.06 ? C3' FMN 800 A 1 HETATM 23 O O3' FMN . . . C 2 -2.263 15.117 12.326 1 41.58 ? O3' FMN 800 A 1 HETATM 24 C C4' FMN . . . C 2 -3.919 16.785 11.727 1 47.93 ? C4' FMN 800 A 1 HETATM 25 O O4' FMN . . . C 2 -4.319 17.65 10.662 1 53.09 ? O4' FMN 800 A 1 HETATM 26 C C5' FMN . . . C 2 -3.891 17.539 13.036 1 46.57 ? C5' FMN 800 A 1 HETATM 27 O O5' FMN . . . C 2 -2.949 18.633 12.937 1 47.11 ? O5' FMN 800 A 1 HETATM 28 P P FMN . . . C 2 -3.459 20.157 12.865 1 49.57 ? P FMN 800 A 1 HETATM 29 O O1P FMN . . . C 2 -3.905 20.47 11.509 1 57.84 ? O1P FMN 800 A 1 HETATM 30 O O2P FMN . . . C 2 -2.281 21.002 13.28 1 49.7 ? O2P FMN 800 A 1 HETATM 31 O O3P FMN . . . C 2 -4.59 20.312 13.864 1 51.3 ? O3P FMN 800 A 1 # _model_server_stats.io_time_ms 28 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 14 _model_server_stats.query_time_ms 319 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 31 #