data_4CRF # _model_server_result.job_id f_TDuEc7v-7JpdrEm3hn0g _model_server_result.datetime_utc '2024-12-02 23:34:12' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4crf # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":1438}' # _entry.id 4CRF # _exptl.entry_id 4CRF _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 542.97 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-[(1S)-1-benzyl-2-[(6-chloro-2-oxo-1H-quinolin-4-yl)methylamino]-2-oxo-ethyl]-4-hydroxy-2-oxo-1H-quinoline-6-carbo _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4CRF _cell.length_a 120.99 _cell.length_b 120.99 _cell.length_c 120.99 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4CRF _symmetry.cell_setting ? _symmetry.Int_Tables_number 197 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'I 2 3' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 29 A CYS 40 1_555 A SG CYS 45 A CYS 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.012 ? disulf ? disulf2 A SG CYS 127 A CYS 136 1_555 A SG CYS 194 A CYS 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? disulf ? disulf3 A SG CYS 158 A CYS 168 1_555 A SG CYS 173 A CYS 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? disulf ? disulf4 A SG CYS 184 A CYS 191 1_555 A SG CYS 212 A CYS 219 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? # _chem_comp.formula 'C29 H23 Cl N4 O5' _chem_comp.formula_weight 542.97 _chem_comp.id R9B _chem_comp.mon_nstd_flag . _chem_comp.name N-[(1S)-1-benzyl-2-[(6-chloro-2-oxo-1H-quinolin-4-yl)methylamino]-2-oxo-ethyl]-4-hydroxy-2-oxo-1H-quinoline-6-carbo _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 R9B sing 290 n y C1 C7 R9B doub 291 n y C2 C3 R9B doub 292 n y C3 C4 R9B sing 293 n y C3 CL5 R9B sing 294 n n C4 C6 R9B doub 295 n y C6 C7 R9B sing 296 n y C6 C11 R9B sing 297 n n C7 N8 R9B sing 298 n n N8 C9 R9B sing 299 n n C9 C10 R9B sing 300 n n C9 O12 R9B doub 301 n n C10 C11 R9B doub 302 n n C11 C13 R9B sing 303 n n C13 N14 R9B sing 304 n n N14 C31 R9B sing 305 n n C15 C16 R9B sing 306 n y C15 C18 R9B doub 307 n y C15 C27 R9B sing 308 n n C16 C17 R9B doub 309 n y C17 C20 R9B sing 310 n y C18 C19 R9B sing 311 n y C19 C20 R9B doub 312 n y C19 C24 R9B sing 313 n n C20 N21 R9B sing 314 n n N21 C22 R9B sing 315 n n C22 C23 R9B sing 316 n n C22 O26 R9B doub 317 n n C23 C24 R9B doub 318 n n C24 O25 R9B sing 319 n n C27 O28 R9B doub 320 n n C27 N29 R9B sing 321 n n N29 C30 R9B sing 322 n n C30 C31 R9B sing 323 n n C30 C33 R9B sing 324 n n C31 O32 R9B doub 325 n n C33 C34 R9B sing 326 n n C34 C35 R9B sing 327 n y C34 C39 R9B doub 328 n y C35 C36 R9B doub 329 n y C36 C37 R9B sing 330 n y C37 C38 R9B doub 331 n y C38 C39 R9B sing 332 n y C1 H1 R9B sing 333 n n C2 H2 R9B sing 334 n n C4 H4 R9B sing 335 n n N8 H8 R9B sing 336 n n C10 H10 R9B sing 337 n n C13 H131 R9B sing 338 n n C13 H132 R9B sing 339 n n N14 H14 R9B sing 340 n n C16 H16 R9B sing 341 n n C18 H18 R9B sing 342 n n C17 H17 R9B sing 343 n n N21 H21 R9B sing 344 n n C23 H23 R9B sing 345 n n O25 H25 R9B sing 346 n n N29 H29 R9B sing 347 n n C30 H30 R9B sing 348 n n C33 H331 R9B sing 349 n n C33 H332 R9B sing 350 n n C35 H35 R9B sing 351 n n C39 H39 R9B sing 352 n n C36 H36 R9B sing 353 n n C37 H37 R9B sing 354 n n C38 H38 R9B sing 355 n n # _atom_sites.entry_id 4CRF _atom_sites.fract_transf_matrix[1][1] 0.008265 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008265 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008265 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GOL A 1 1435 1435 GOL GOL . C 2 GOL A 1 1436 1436 GOL GOL . D 2 GOL A 1 1437 1437 GOL GOL . E 3 R9B A 1 1438 1438 R9B R9B . F 4 SO4 A 1 1439 1439 SO4 SO4 . G 4 SO4 A 1 1440 1440 SO4 SO4 . H 4 SO4 A 1 1441 1441 SO4 SO4 . I 4 SO4 A 1 1442 1442 SO4 SO4 . J 5 CL A 1 1443 1443 CL CL . K 6 HOH A 1 2001 2001 HOH HOH . K 6 HOH A 2 2002 2002 HOH HOH . K 6 HOH A 3 2003 2003 HOH HOH . K 6 HOH A 4 2004 2004 HOH HOH . K 6 HOH A 5 2005 2005 HOH HOH . K 6 HOH A 6 2006 2006 HOH HOH . K 6 HOH A 7 2007 2007 HOH HOH . K 6 HOH A 8 2008 2008 HOH HOH . K 6 HOH A 9 2009 2009 HOH HOH . K 6 HOH A 10 2010 2010 HOH HOH . K 6 HOH A 11 2011 2011 HOH HOH . K 6 HOH A 12 2012 2012 HOH HOH . K 6 HOH A 13 2013 2013 HOH HOH . K 6 HOH A 14 2014 2014 HOH HOH . K 6 HOH A 15 2015 2015 HOH HOH . K 6 HOH A 16 2016 2016 HOH HOH . K 6 HOH A 17 2017 2017 HOH HOH . K 6 HOH A 18 2018 2018 HOH HOH . K 6 HOH A 19 2019 2019 HOH HOH . K 6 HOH A 20 2020 2020 HOH HOH . K 6 HOH A 21 2021 2021 HOH HOH . K 6 HOH A 22 2022 2022 HOH HOH . K 6 HOH A 23 2023 2023 HOH HOH . K 6 HOH A 24 2024 2024 HOH HOH . K 6 HOH A 25 2025 2025 HOH HOH . K 6 HOH A 26 2026 2026 HOH HOH . K 6 HOH A 27 2027 2027 HOH HOH . K 6 HOH A 28 2028 2028 HOH HOH . K 6 HOH A 29 2029 2029 HOH HOH . K 6 HOH A 30 2030 2030 HOH HOH . K 6 HOH A 31 2031 2031 HOH HOH . K 6 HOH A 32 2032 2032 HOH HOH . K 6 HOH A 33 2033 2033 HOH HOH . K 6 HOH A 34 2034 2034 HOH HOH . K 6 HOH A 35 2035 2035 HOH HOH . K 6 HOH A 36 2036 2036 HOH HOH . K 6 HOH A 37 2037 2037 HOH HOH . K 6 HOH A 38 2038 2038 HOH HOH . K 6 HOH A 39 2039 2039 HOH HOH . K 6 HOH A 40 2040 2040 HOH HOH . K 6 HOH A 41 2041 2041 HOH HOH . K 6 HOH A 42 2042 2042 HOH HOH . K 6 HOH A 43 2043 2043 HOH HOH . K 6 HOH A 44 2044 2044 HOH HOH . K 6 HOH A 45 2045 2045 HOH HOH . K 6 HOH A 46 2046 2046 HOH HOH . K 6 HOH A 47 2047 2047 HOH HOH . K 6 HOH A 48 2048 2048 HOH HOH . K 6 HOH A 49 2049 2049 HOH HOH . K 6 HOH A 50 2050 2050 HOH HOH . K 6 HOH A 51 2051 2051 HOH HOH . K 6 HOH A 52 2052 2052 HOH HOH . K 6 HOH A 53 2053 2053 HOH HOH . K 6 HOH A 54 2054 2054 HOH HOH . K 6 HOH A 55 2055 2055 HOH HOH . K 6 HOH A 56 2056 2056 HOH HOH . K 6 HOH A 57 2057 2057 HOH HOH . K 6 HOH A 58 2058 2058 HOH HOH . K 6 HOH A 59 2059 2059 HOH HOH . K 6 HOH A 60 2060 2060 HOH HOH . K 6 HOH A 61 2061 2061 HOH HOH . K 6 HOH A 62 2062 2062 HOH HOH . K 6 HOH A 63 2063 2063 HOH HOH . K 6 HOH A 64 2064 2064 HOH HOH . K 6 HOH A 65 2065 2065 HOH HOH . K 6 HOH A 66 2066 2066 HOH HOH . K 6 HOH A 67 2067 2067 HOH HOH . K 6 HOH A 68 2068 2068 HOH HOH . K 6 HOH A 69 2069 2069 HOH HOH . K 6 HOH A 70 2070 2070 HOH HOH . K 6 HOH A 71 2071 2071 HOH HOH . K 6 HOH A 72 2072 2072 HOH HOH . K 6 HOH A 73 2073 2073 HOH HOH . K 6 HOH A 74 2074 2074 HOH HOH . K 6 HOH A 75 2075 2075 HOH HOH . K 6 HOH A 76 2076 2076 HOH HOH . K 6 HOH A 77 2077 2077 HOH HOH . K 6 HOH A 78 2078 2078 HOH HOH . K 6 HOH A 79 2079 2079 HOH HOH . K 6 HOH A 80 2080 2080 HOH HOH . K 6 HOH A 81 2081 2081 HOH HOH . K 6 HOH A 82 2082 2082 HOH HOH . K 6 HOH A 83 2083 2083 HOH HOH . K 6 HOH A 84 2084 2084 HOH HOH . K 6 HOH A 85 2085 2085 HOH HOH . K 6 HOH A 86 2086 2086 HOH HOH . K 6 HOH A 87 2087 2087 HOH HOH . K 6 HOH A 88 2088 2088 HOH HOH . K 6 HOH A 89 2089 2089 HOH HOH . K 6 HOH A 90 2090 2090 HOH HOH . K 6 HOH A 91 2091 2091 HOH HOH . K 6 HOH A 92 2092 2092 HOH HOH . K 6 HOH A 93 2093 2093 HOH HOH . K 6 HOH A 94 2094 2094 HOH HOH . K 6 HOH A 95 2095 2095 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C27 R9B . . . E 3 55.108 26.291 9.746 1 23.21 ? C27 R9B 1438 A 1 HETATM 2 O O28 R9B . . . E 3 55.903 25.439 10.089 1 22.89 ? O28 R9B 1438 A 1 HETATM 3 C C15 R9B . . . E 3 55.503 27.21 8.638 1 24.43 ? C15 R9B 1438 A 1 HETATM 4 C C16 R9B . . . E 3 54.853 28.446 8.484 1 24.15 ? C16 R9B 1438 A 1 HETATM 5 C C17 R9B . . . E 3 55.224 29.287 7.48 1 24.83 ? C17 R9B 1438 A 1 HETATM 6 C C20 R9B . . . E 3 56.273 28.969 6.611 1 24.76 ? C20 R9B 1438 A 1 HETATM 7 C C19 R9B . . . E 3 56.958 27.758 6.755 1 24.52 ? C19 R9B 1438 A 1 HETATM 8 C C18 R9B . . . E 3 56.558 26.884 7.77 1 24.39 ? C18 R9B 1438 A 1 HETATM 9 C C24 R9B . . . E 3 58.087 27.491 5.813 1 26.68 ? C24 R9B 1438 A 1 HETATM 10 C C23 R9B . . . E 3 58.405 28.419 4.842 1 27.31 ? C23 R9B 1438 A 1 HETATM 11 C C22 R9B . . . E 3 57.66 29.613 4.753 1 26.05 ? C22 R9B 1438 A 1 HETATM 12 O O26 R9B . . . E 3 57.935 30.447 3.898 1 26.41 ? O26 R9B 1438 A 1 HETATM 13 N N21 R9B . . . E 3 56.653 29.85 5.609 1 25.05 ? N21 R9B 1438 A 1 HETATM 14 O O25 R9B . . . E 3 58.832 26.378 5.883 1 27.11 ? O25 R9B 1438 A 1 HETATM 15 N N29 R9B . . . E 3 53.913 26.409 10.394 1 22.67 ? N29 R9B 1438 A 1 HETATM 16 C C30 R9B . . . E 3 53.496 25.534 11.491 1 20.56 ? C30 R9B 1438 A 1 HETATM 17 C C31 R9B . . . E 3 52.185 24.858 11.187 1 20.07 ? C31 R9B 1438 A 1 HETATM 18 O O32 R9B . . . E 3 51.572 25.09 10.157 1 19.55 ? O32 R9B 1438 A 1 HETATM 19 C C33 R9B . . . E 3 53.225 26.383 12.73 1 22.86 ? C33 R9B 1438 A 1 HETATM 20 C C34 R9B . . . E 3 54.16 27.538 12.842 1 25.16 ? C34 R9B 1438 A 1 HETATM 21 C C35 R9B . . . E 3 53.707 28.801 12.482 1 26 ? C35 R9B 1438 A 1 HETATM 22 C C39 R9B . . . E 3 55.467 27.327 13.299 1 26.54 ? C39 R9B 1438 A 1 HETATM 23 C C36 R9B . . . E 3 54.57 29.881 12.587 1 28.1 ? C36 R9B 1438 A 1 HETATM 24 C C38 R9B . . . E 3 56.333 28.405 13.4 1 27.05 ? C38 R9B 1438 A 1 HETATM 25 C C37 R9B . . . E 3 55.87 29.671 13.048 1 28.52 ? C37 R9B 1438 A 1 HETATM 26 C C1 R9B . . . E 3 49.021 18.507 11.395 1 18.79 ? C1 R9B 1438 A 1 HETATM 27 C C2 R9B . . . E 3 47.716 18.88 11.62 1 17.85 ? C2 R9B 1438 A 1 HETATM 28 C C3 R9B . . . E 3 47.432 20.205 11.906 1 18.09 ? C3 R9B 1438 A 1 HETATM 29 C C4 R9B . . . E 3 48.394 21.191 11.975 1 17.64 ? C4 R9B 1438 A 1 HETATM 30 CL CL5 R9B . . . E 3 45.791 20.615 12.166 1 17.64 ? CL5 R9B 1438 A 1 HETATM 31 C C6 R9B . . . E 3 49.72 20.819 11.75 1 18.19 ? C6 R9B 1438 A 1 HETATM 32 C C7 R9B . . . E 3 50.03 19.471 11.458 1 18.77 ? C7 R9B 1438 A 1 HETATM 33 N N8 R9B . . . E 3 51.348 19.082 11.293 1 18.5 ? N8 R9B 1438 A 1 HETATM 34 C C9 R9B . . . E 3 52.349 19.988 11.449 1 20.29 ? C9 R9B 1438 A 1 HETATM 35 C C10 R9B . . . E 3 52.091 21.383 11.696 1 19.68 ? C10 R9B 1438 A 1 HETATM 36 C C11 R9B . . . E 3 50.801 21.822 11.816 1 19.17 ? C11 R9B 1438 A 1 HETATM 37 O O12 R9B . . . E 3 53.507 19.607 11.337 1 20.61 ? O12 R9B 1438 A 1 HETATM 38 C C13 R9B . . . E 3 50.466 23.28 12.024 1 19.16 ? C13 R9B 1438 A 1 HETATM 39 N N14 R9B . . . E 3 51.698 24.023 12.133 1 19.36 ? N14 R9B 1438 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 339 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 39 #