data_4CRM # _model_server_result.job_id FAd0add29_GlZqVVlWHErg _model_server_result.datetime_utc '2024-11-05 01:13:22' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4crm # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":1611}' # _entry.id 4CRM # _exptl.entry_id 4CRM _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 351.64 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'IRON/SULFUR CLUSTER' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4CRM _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4CRM _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 D N N ? 4 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 16 P CYS 16 1_555 E FE4 SF4 . P SF4 1611 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.415 ? metalc ? metalc2 A SG CYS 55 P CYS 55 1_555 D FE2 SF4 . P SF4 1610 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.62 ? metalc ? metalc3 C O1G ATP . P ATP 1609 1_555 G MG MG . P MG 1613 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.674 ? metalc ? metalc4 C O2B ATP . P ATP 1609 1_555 G MG MG . P MG 1613 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.199 ? # _chem_comp.formula 'Fe4 S4' _chem_comp.formula_weight 351.64 _chem_comp.id SF4 _chem_comp.mon_nstd_flag . _chem_comp.name 'IRON/SULFUR CLUSTER' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag FE1 S2 SF4 sing 383 n n FE1 S3 SF4 sing 384 n n FE1 S4 SF4 sing 385 n n FE2 S1 SF4 sing 386 n n FE2 S3 SF4 sing 387 n n FE2 S4 SF4 sing 388 n n FE3 S1 SF4 sing 389 n n FE3 S2 SF4 sing 390 n n FE3 S4 SF4 sing 391 n n FE4 S1 SF4 sing 392 n n FE4 S2 SF4 sing 393 n n FE4 S3 SF4 sing 394 n n # _atom_sites.entry_id 4CRM _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 ATP P 1 1609 1609 ATP ATP . D 4 SF4 P 1 1610 1610 SF4 SF4 . E 4 SF4 P 1 1611 1611 SF4 SF4 . F 5 ADP P 1 1612 1612 ADP ADP . G 6 MG P 1 1613 1613 MG MG . H 7 HOH P 1 1903 1903 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 FE FE1 SF4 . . . E 4 -35.406 47.669 -62.54 1 22.71 ? FE1 SF4 1611 P 1 HETATM 2 FE FE2 SF4 . . . E 4 -35.69 46.829 -65.124 1 23.33 ? FE2 SF4 1611 P 1 HETATM 3 FE FE3 SF4 . . . E 4 -33.167 47.337 -64.065 1 23.3 ? FE3 SF4 1611 P 1 HETATM 4 FE FE4 SF4 . . . E 4 -34.766 49.355 -64.685 1 22.56 ? FE4 SF4 1611 P 1 HETATM 5 S S1 SF4 . . . E 4 -33.954 48.001 -66.127 1 21.55 ? S1 SF4 1611 P 1 HETATM 6 S S2 SF4 . . . E 4 -33.669 49.14 -62.856 1 20.2 ? S2 SF4 1611 P 1 HETATM 7 S S3 SF4 . . . E 4 -36.684 48.629 -64.217 1 21.07 ? S3 SF4 1611 P 1 HETATM 8 S S4 SF4 . . . E 4 -34.647 45.756 -63.534 1 20.43 ? S4 SF4 1611 P 1 # _model_server_stats.io_time_ms 64 _model_server_stats.parse_time_ms 27 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 302 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 8 #