data_4CRN
#
_model_server_result.job_id            y7Km5al6NEEQ4Wv4A6QuQw 
_model_server_result.datetime_utc      '2024-12-26 12:23:55' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4crn 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":1685}' 
#
_entry.id    4CRN 
#
_exptl.entry_id    4CRN 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              522.196 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            4CRN 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               1 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4CRN 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C10 H17 N6 O13 P3' 
_chem_comp.formula_weight    522.196 
_chem_comp.id                GNP 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PG O1G GNP doub 129 n n 
PG O2G GNP sing 130 n n 
PG O3G GNP sing 131 n n 
PG N3B GNP sing 132 n n 
O2G HOG2 GNP sing 133 n n 
O3G HOG3 GNP sing 134 n n 
N3B PB GNP sing 135 n n 
N3B HNB3 GNP sing 136 n n 
PB O1B GNP doub 137 n n 
PB O2B GNP sing 138 n n 
PB O3A GNP sing 139 n n 
O2B HOB2 GNP sing 140 n n 
O3A PA GNP sing 141 n n 
PA O1A GNP doub 142 n n 
PA O2A GNP sing 143 n n 
PA O5' GNP sing 144 n n 
O2A HOA2 GNP sing 145 n n 
O5' C5' GNP sing 146 n n 
C5' C4' GNP sing 147 n n 
C5' "H5'2" GNP sing 148 n n 
C5' "H5'1" GNP sing 149 n n 
C4' O4' GNP sing 150 n n 
C4' C3' GNP sing 151 n n 
C4' H4' GNP sing 152 n n 
O4' C1' GNP sing 153 n n 
C3' O3' GNP sing 154 n n 
C3' C2' GNP sing 155 n n 
C3' H3' GNP sing 156 n n 
O3' HO3' GNP sing 157 n n 
C2' O2' GNP sing 158 n n 
C2' C1' GNP sing 159 n n 
C2' H2' GNP sing 160 n n 
O2' HO2' GNP sing 161 n n 
C1' N9 GNP sing 162 n n 
C1' H1' GNP sing 163 n n 
N9 C8 GNP sing 164 n y 
N9 C4 GNP sing 165 n y 
C8 N7 GNP doub 166 n y 
C8 H8 GNP sing 167 n n 
N7 C5 GNP sing 168 n y 
C5 C6 GNP sing 169 n y 
C5 C4 GNP doub 170 n y 
C6 O6 GNP doub 171 n n 
C6 N1 GNP sing 172 n y 
N1 C2 GNP sing 173 n y 
N1 HN1 GNP sing 174 n n 
C2 N2 GNP sing 175 n n 
C2 N3 GNP doub 176 n y 
N2 HN21 GNP sing 177 n n 
N2 HN22 GNP sing 178 n n 
N3 C4 GNP sing 179 n y 
#
_atom_sites.entry_id                     4CRN 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
_pdbx_nonpoly_scheme.asym_id          C 
_pdbx_nonpoly_scheme.entity_id        3 
_pdbx_nonpoly_scheme.mon_id           GNP 
_pdbx_nonpoly_scheme.pdb_strand_id    P 
_pdbx_nonpoly_scheme.ndb_seq_num      1 
_pdbx_nonpoly_scheme.pdb_seq_num      1685 
_pdbx_nonpoly_scheme.auth_seq_num     1685 
_pdbx_nonpoly_scheme.pdb_mon_id       GNP 
_pdbx_nonpoly_scheme.auth_mon_id      GNP 
_pdbx_nonpoly_scheme.pdb_ins_code     . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PG GNP . . . C 3 -15.007 55.652 -57.713 1 123.15 ? PG GNP 1685 P 1 
HETATM 2 O O1G GNP . . . C 3 -14.477 55.945 -56.349 1 123.26 ? O1G GNP 1685 P 1 
HETATM 3 O O2G GNP . . . C 3 -15.563 56.819 -58.432 1 122.99 ? O2G GNP 1685 P 1 
HETATM 4 O O3G GNP . . . C 3 -15.929 54.446 -57.544 1 123.25 ? O3G GNP 1685 P 1 
HETATM 5 N N3B GNP . . . C 3 -13.793 55.187 -58.617 1 121.67 ? N3B GNP 1685 P 1 
HETATM 6 P PB GNP . . . C 3 -13.989 54.186 -59.844 1 120.26 ? PB GNP 1685 P 1 
HETATM 7 O O1B GNP . . . C 3 -14.73 52.979 -59.413 1 119.17 ? O1B GNP 1685 P 1 
HETATM 8 O O2B GNP . . . C 3 -14.58 54.991 -60.934 1 119.99 ? O2B GNP 1685 P 1 
HETATM 9 O O3A GNP . . . C 3 -12.614 53.731 -60.341 1 119.14 ? O3A GNP 1685 P 1 
HETATM 10 P PA GNP . . . C 3 -11.275 54.303 -59.864 1 117.84 ? PA GNP 1685 P 1 
HETATM 11 O O1A GNP . . . C 3 -11.18 55.707 -60.309 1 117.52 ? O1A GNP 1685 P 1 
HETATM 12 O O2A GNP . . . C 3 -11.089 54.071 -58.413 1 117.87 ? O2A GNP 1685 P 1 
HETATM 13 O O5' GNP . . . C 3 -10.143 53.483 -60.605 1 117.06 ? O5' GNP 1685 P 1 
HETATM 14 C C5' GNP . . . C 3 -10.024 52.071 -60.396 1 116.58 ? C5' GNP 1685 P 1 
HETATM 15 C C4' GNP . . . C 3 -8.643 51.566 -60.758 1 116.32 ? C4' GNP 1685 P 1 
HETATM 16 O O4' GNP . . . C 3 -8.341 51.918 -62.127 1 116.19 ? O4' GNP 1685 P 1 
HETATM 17 C C3' GNP . . . C 3 -7.526 52.159 -59.906 1 116.36 ? C3' GNP 1685 P 1 
HETATM 18 O O3' GNP . . . C 3 -7.199 51.276 -58.825 1 116.76 ? O3' GNP 1685 P 1 
HETATM 19 C C2' GNP . . . C 3 -6.36 52.383 -60.878 1 116.36 ? C2' GNP 1685 P 1 
HETATM 20 O O2' GNP . . . C 3 -5.294 51.461 -60.712 1 116.34 ? O2' GNP 1685 P 1 
HETATM 21 C C1' GNP . . . C 3 -6.975 52.264 -62.277 1 116.3 ? C1' GNP 1685 P 1 
HETATM 22 N N9 GNP . . . C 3 -6.884 53.505 -63.055 1 116.19 ? N9 GNP 1685 P 1 
HETATM 23 C C8 GNP . . . C 3 -7.591 54.655 -62.801 1 116 ? C8 GNP 1685 P 1 
HETATM 24 N N7 GNP . . . C 3 -7.335 55.626 -63.631 1 115.73 ? N7 GNP 1685 P 1 
HETATM 25 C C5 GNP . . . C 3 -6.385 55.106 -64.497 1 115.88 ? C5 GNP 1685 P 1 
HETATM 26 C C6 GNP . . . C 3 -5.738 55.716 -65.606 1 115.79 ? C6 GNP 1685 P 1 
HETATM 27 O O6 GNP . . . C 3 -5.887 56.865 -66.041 1 115.3 ? O6 GNP 1685 P 1 
HETATM 28 N N1 GNP . . . C 3 -4.844 54.848 -66.232 1 115.97 ? N1 GNP 1685 P 1 
HETATM 29 C C2 GNP . . . C 3 -4.616 53.546 -65.826 1 116.33 ? C2 GNP 1685 P 1 
HETATM 30 N N2 GNP . . . C 3 -3.716 52.857 -66.548 1 116.26 ? N2 GNP 1685 P 1 
HETATM 31 N N3 GNP . . . C 3 -5.219 52.962 -64.788 1 116.54 ? N3 GNP 1685 P 1 
HETATM 32 C C4 GNP . . . C 3 -6.094 53.795 -64.158 1 116.23 ? C4 GNP 1685 P 1 
#
_model_server_stats.io_time_ms              49 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    27 
_model_server_stats.query_time_ms           333 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           32 
#