data_4CUN # _model_server_result.job_id mFSyaf1QWKztvu-5qodnPg _model_server_result.datetime_utc '2024-10-19 00:49:28' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4cun # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":800}' # _entry.id 4CUN # _exptl.entry_id 4CUN _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 247.253 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (9aS)-2-amino-9a-methyl-8,9,9a,10-tetrahydrobenzo[g]pteridine-4,6(3H,7H)-dione _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4CUN _cell.length_a 58.865 _cell.length_b 106.177 _cell.length_c 156.735 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4CUN _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 E N N ? 4 K N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 147 A CYS 186 1_555 D FE HEM . A HEM 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.474 ? covale ? covale1 A C VAL 344 A VAL 383 1_555 A N CAS 345 A CAS 384 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale2 A C CAS 345 A CAS 384 1_555 A N MET 346 A MET 385 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? metalc ? metalc2 H ZN ZN . A ZN 1483 1_555 A SG CYS 57 A CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.342 ? metalc ? metalc3 H ZN ZN . A ZN 1483 1_555 A SG CYS 62 A CYS 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.471 ? metalc ? metalc4 H ZN ZN . A ZN 1483 1_555 B SG CYS 57 B CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.36 ? metalc ? metalc5 H ZN ZN . A ZN 1483 1_555 B SG CYS 62 B CYS 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.344 ? metalc ? metalc6 B SG CYS 147 B CYS 186 1_555 J FE HEM . B HEM 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.354 ? covale ? covale3 B C VAL 344 B VAL 383 1_555 B N CAS 345 B CAS 384 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.315 ? covale ? covale4 B C CAS 345 B CAS 384 1_555 B N MET 346 B MET 385 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? # _chem_comp.formula 'C11 H13 N5 O2' _chem_comp.formula_weight 247.253 _chem_comp.id WS6 _chem_comp.mon_nstd_flag . _chem_comp.name (9aS)-2-amino-9a-methyl-8,9,9a,10-tetrahydrobenzo[g]pteridine-4,6(3H,7H)-dione _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4CUN _atom_sites.fract_transf_matrix[1][1] 0.016988 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009418 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00638 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 ARG A 1 700 700 ARG ARG . D 3 HEM A 1 500 500 HEM HEM . E 4 WS6 A 1 800 800 WS6 WS6 . F 5 ACT A 1 860 860 ACT ACT . G 6 GOL A 1 880 880 GOL GOL . H 7 ZN A 1 1483 1483 ZN ZN . I 2 ARG B 1 700 700 ARG ARG . J 3 HEM B 1 500 500 HEM HEM . K 4 WS6 B 1 800 800 WS6 WS6 . L 5 ACT B 1 860 860 ACT ACT . M 6 GOL B 1 880 880 GOL GOL . N 8 HOH A 1 2001 2001 HOH HOH . N 8 HOH A 2 2002 2002 HOH HOH . N 8 HOH A 3 2003 2003 HOH HOH . N 8 HOH A 4 2004 2004 HOH HOH . N 8 HOH A 5 2005 2005 HOH HOH . N 8 HOH A 6 2006 2006 HOH HOH . N 8 HOH A 7 2007 2007 HOH HOH . N 8 HOH A 8 2008 2008 HOH HOH . N 8 HOH A 9 2009 2009 HOH HOH . N 8 HOH A 10 2010 2010 HOH HOH . N 8 HOH A 11 2011 2011 HOH HOH . N 8 HOH A 12 2012 2012 HOH HOH . N 8 HOH A 13 2013 2013 HOH HOH . N 8 HOH A 14 2014 2014 HOH HOH . N 8 HOH A 15 2015 2015 HOH HOH . N 8 HOH A 16 2016 2016 HOH HOH . N 8 HOH A 17 2017 2017 HOH HOH . N 8 HOH A 18 2018 2018 HOH HOH . N 8 HOH A 19 2019 2019 HOH HOH . N 8 HOH A 20 2020 2020 HOH HOH . N 8 HOH A 21 2021 2021 HOH HOH . N 8 HOH A 22 2022 2022 HOH HOH . N 8 HOH A 23 2023 2023 HOH HOH . N 8 HOH A 24 2024 2024 HOH HOH . N 8 HOH A 25 2025 2025 HOH HOH . N 8 HOH A 26 2026 2026 HOH HOH . N 8 HOH A 27 2027 2027 HOH HOH . N 8 HOH A 28 2028 2028 HOH HOH . N 8 HOH A 29 2029 2029 HOH HOH . N 8 HOH A 30 2030 2030 HOH HOH . N 8 HOH A 31 2031 2031 HOH HOH . N 8 HOH A 32 2032 2032 HOH HOH . N 8 HOH A 33 2033 2033 HOH HOH . N 8 HOH A 34 2034 2034 HOH HOH . N 8 HOH A 35 2035 2035 HOH HOH . N 8 HOH A 36 2036 2036 HOH HOH . O 8 HOH B 1 2001 2001 HOH HOH . O 8 HOH B 2 2002 2002 HOH HOH . O 8 HOH B 3 2003 2003 HOH HOH . O 8 HOH B 4 2004 2004 HOH HOH . O 8 HOH B 5 2005 2005 HOH HOH . O 8 HOH B 6 2006 2006 HOH HOH . O 8 HOH B 7 2007 2007 HOH HOH . O 8 HOH B 8 2008 2008 HOH HOH . O 8 HOH B 9 2009 2009 HOH HOH . O 8 HOH B 10 2010 2010 HOH HOH . O 8 HOH B 11 2011 2011 HOH HOH . O 8 HOH B 12 2012 2012 HOH HOH . O 8 HOH B 13 2013 2013 HOH HOH . O 8 HOH B 14 2014 2014 HOH HOH . O 8 HOH B 15 2015 2015 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O04 WS6 . . . E 4 10.298 15.018 41.079 1 91.4 ? O04 WS6 800 A 1 HETATM 2 C C04 WS6 . . . E 4 9.782 13.986 41.587 1 85.64 ? C04 WS6 800 A 1 HETATM 3 N N03 WS6 . . . E 4 8.942 13.207 40.883 1 78.76 ? N03 WS6 800 A 1 HETATM 4 C C02 WS6 . . . E 4 8.37 12.108 41.407 1 82.21 ? C02 WS6 800 A 1 HETATM 5 N N02 WS6 . . . E 4 7.524 11.367 40.638 1 76.06 ? N02 WS6 800 A 1 HETATM 6 N N01 WS6 . . . E 4 8.608 11.716 42.689 1 88.01 ? N01 WS6 800 A 1 HETATM 7 C C01 WS6 . . . E 4 9.429 12.403 43.516 1 80.37 ? C01 WS6 800 A 1 HETATM 8 C C4A WS6 . . . E 4 10.074 13.608 42.995 1 82.44 ? C4A WS6 800 A 1 HETATM 9 N N05 WS6 . . . E 4 10.884 14.325 43.785 1 89.71 ? N05 WS6 800 A 1 HETATM 10 N N10 WS6 . . . E 4 9.676 12.004 44.757 1 76.4 ? N10 WS6 800 A 1 HETATM 11 C C9A WS6 . . . E 4 10.528 12.771 45.669 1 77.44 ? C9A WS6 800 A 1 HETATM 12 C C09 WS6 . . . E 4 11.656 11.983 46.353 1 82.57 ? C09 WS6 800 A 1 HETATM 13 C C11 WS6 . . . E 4 9.568 13.378 46.656 1 78.01 ? C11 WS6 800 A 1 HETATM 14 C C5A WS6 . . . E 4 11.16 13.953 45.047 1 78.68 ? C5A WS6 800 A 1 HETATM 15 C C06 WS6 . . . E 4 12.059 14.772 45.925 1 79.04 ? C06 WS6 800 A 1 HETATM 16 O O06 WS6 . . . E 4 12.068 15.987 45.753 1 88.52 ? O06 WS6 800 A 1 HETATM 17 C C07 WS6 . . . E 4 12.885 14.111 47.027 1 77.39 ? C07 WS6 800 A 1 HETATM 18 C C08 WS6 . . . E 4 12.284 12.781 47.508 1 74.36 ? C08 WS6 800 A 1 # _model_server_stats.io_time_ms 16 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 32 _model_server_stats.query_time_ms 285 _model_server_stats.encode_time_ms 13 _model_server_stats.element_count 18 #