data_4D2C # _model_server_result.job_id g_LkVwhePeF7q0RCITzy9g _model_server_result.datetime_utc '2025-02-17 11:03:49' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4d2c # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":507}' # _entry.id 4D2C # _exptl.entry_id 4D2C _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4D2C _cell.length_a 102.06 _cell.length_b 110.33 _cell.length_c 110.74 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4D2C _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id H _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 357 n n P O2 PO4 sing 358 n n P O3 PO4 sing 359 n n P O4 PO4 sing 360 n n # _atom_sites.entry_id 4D2C _atom_sites.fract_transf_matrix[1][1] 0.009798 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009064 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00903 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 78M A 1 501 1473 78M 78M . C 2 78M A 1 502 1474 78M 78M . D 3 78N A 1 503 1475 78N 78N . E 2 78M A 1 504 1476 78M 78M . F 2 78M A 1 505 1477 78M 78M . G 3 78N A 1 506 1478 78N 78N . H 4 PO4 A 1 507 1479 PO4 PO4 . I 5 ALA A 1 508 32 ALA ALA . J 6 PHE A 1 509 33 PHE PHE . K 7 HOH A 1 601 2008 HOH HOH . K 7 HOH A 2 602 2004 HOH HOH . K 7 HOH A 3 603 2035 HOH HOH . K 7 HOH A 4 604 2002 HOH HOH . K 7 HOH A 5 605 2026 HOH HOH . K 7 HOH A 6 606 2005 HOH HOH . K 7 HOH A 7 607 2019 HOH HOH . K 7 HOH A 8 608 2037 HOH HOH . K 7 HOH A 9 609 2036 HOH HOH . K 7 HOH A 10 610 2023 HOH HOH . K 7 HOH A 11 611 2003 HOH HOH . K 7 HOH A 12 612 2022 HOH HOH . K 7 HOH A 13 613 2014 HOH HOH . K 7 HOH A 14 614 2017 HOH HOH . K 7 HOH A 15 615 2032 HOH HOH . K 7 HOH A 16 616 2038 HOH HOH . K 7 HOH A 17 617 2029 HOH HOH . K 7 HOH A 18 618 2021 HOH HOH . K 7 HOH A 19 619 2009 HOH HOH . K 7 HOH A 20 620 2006 HOH HOH . K 7 HOH A 21 621 2018 HOH HOH . K 7 HOH A 22 622 2024 HOH HOH . K 7 HOH A 23 623 2033 HOH HOH . K 7 HOH A 24 624 2020 HOH HOH . K 7 HOH A 25 625 2011 HOH HOH . K 7 HOH A 26 626 2027 HOH HOH . K 7 HOH A 27 627 2028 HOH HOH . K 7 HOH A 28 628 2010 HOH HOH . K 7 HOH A 29 629 2034 HOH HOH . K 7 HOH A 30 630 2013 HOH HOH . K 7 HOH A 31 631 2031 HOH HOH . K 7 HOH A 32 632 2012 HOH HOH . K 7 HOH A 33 633 2001 HOH HOH . K 7 HOH A 34 634 2025 HOH HOH . K 7 HOH A 35 635 2030 HOH HOH . K 7 HOH A 36 636 2007 HOH HOH . K 7 HOH A 37 637 2016 HOH HOH . K 7 HOH A 38 638 2015 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . H 4 46.663 18.465 16.537 1 73.41 ? P PO4 507 A 1 HETATM 2 O O1 PO4 . . . H 4 46.592 17.899 15.134 1 53.26 ? O1 PO4 507 A 1 HETATM 3 O O2 PO4 . . . H 4 45.978 19.812 16.616 1 43.55 ? O2 PO4 507 A 1 HETATM 4 O O3 PO4 . . . H 4 48.111 18.617 16.945 1 65.64 ? O3 PO4 507 A 1 HETATM 5 O O4 PO4 . . . H 4 45.989 17.508 17.498 1 72.42 ? O4 PO4 507 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 294 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 5 #