data_4D4S
#
_model_server_result.job_id            aMXxU_3fNC-r36mgqQMIBg 
_model_server_result.datetime_utc      '2024-12-18 06:40:26' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4d4s 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"I","auth_seq_id":1690}' 
#
_entry.id    4D4S 
#
_exptl.entry_id    4D4S 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              468.936 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            2-({5-CHLORO-2-[(2-METHOXY-4-MORPHOLIN-4-YLPHENYL)AMINO]PYRIMIDIN-4-YL}AMINO)-N-METHYLBENZAMIDE 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          94.33 
_cell.angle_gamma         90 
_cell.entry_id            4D4S 
_cell.length_a            45.266 
_cell.length_b            124.877 
_cell.length_c            50.814 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4D4S 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 author_and_software_defined_assembly 1 
PISA monomeric 1 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,E,J 1 1 
B,F,G,H,I,K 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             I 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C23 H25 Cl N6 O3' 
_chem_comp.formula_weight    468.936 
_chem_comp.id                BI9 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              2-({5-CHLORO-2-[(2-METHOXY-4-MORPHOLIN-4-YLPHENYL)AMINO]PYRIMIDIN-4-YL}AMINO)-N-METHYLBENZAMIDE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
CBC CBE BI9 sing 70 n n 
CBC NBB BI9 sing 71 n n 
CBE OBG BI9 sing 72 n n 
OBG CBF BI9 sing 73 n n 
CBF CBD BI9 sing 74 n n 
CBD NBB BI9 sing 75 n n 
NBB CBA BI9 sing 76 n n 
CBA CAY BI9 sing 77 n y 
CBA CAX BI9 doub 78 n y 
CAY CAS BI9 doub 79 n y 
CAS OAT BI9 sing 80 n n 
CAS CAL BI9 sing 81 n y 
OAT CAU BI9 sing 82 n n 
CAX CAR BI9 sing 83 n y 
CAR CAL BI9 doub 84 n y 
CAL NAH BI9 sing 85 n n 
NAH C2 BI9 sing 86 n n 
C2 N3 BI9 sing 87 n y 
C2 N1 BI9 doub 88 n y 
N3 C4 BI9 doub 89 n y 
N1 C6 BI9 sing 90 n y 
C6 C5 BI9 doub 91 n y 
C5 CL5 BI9 sing 92 n n 
C5 C4 BI9 sing 93 n y 
C4 NAE BI9 sing 94 n n 
NAE CAJ BI9 sing 95 n n 
CAJ CAQ BI9 sing 96 n y 
CAJ CAP BI9 doub 97 n y 
CAQ CAW BI9 doub 98 n y 
CAW CAZ BI9 sing 99 n y 
CAZ CAV BI9 doub 100 n y 
CAV CAP BI9 sing 101 n y 
CAP CAO BI9 sing 102 n n 
CAO OAI BI9 doub 103 n n 
CAO NAN BI9 sing 104 n n 
NAN CAM BI9 sing 105 n n 
CBC HBC1 BI9 sing 106 n n 
CBC HBC2 BI9 sing 107 n n 
CBE HBE1 BI9 sing 108 n n 
CBE HBE2 BI9 sing 109 n n 
CBF HBF1 BI9 sing 110 n n 
CBF HBF2 BI9 sing 111 n n 
CBD HBD1 BI9 sing 112 n n 
CBD HBD2 BI9 sing 113 n n 
CAY HAY BI9 sing 114 n n 
CAX HAX BI9 sing 115 n n 
CAU HAU1 BI9 sing 116 n n 
CAU HAU2 BI9 sing 117 n n 
CAU HAU3 BI9 sing 118 n n 
CAR HAR BI9 sing 119 n n 
NAH HAH BI9 sing 120 n n 
C6 H6 BI9 sing 121 n n 
NAE HAE BI9 sing 122 n n 
CAQ HAQ BI9 sing 123 n n 
CAW HAW BI9 sing 124 n n 
CAZ HAZ BI9 sing 125 n n 
CAV HAV BI9 sing 126 n n 
NAN HAN BI9 sing 127 n n 
CAM HAM1 BI9 sing 128 n n 
CAM HAM2 BI9 sing 129 n n 
CAM HAM3 BI9 sing 130 n n 
#
_atom_sites.entry_id                     4D4S 
_atom_sites.fract_transf_matrix[1][1]    0.022092 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.001673 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008008 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.019736 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 SO4 A 1 1687 1687 SO4 SO4 . 
D 2 SO4 A 1 1688 1688 SO4 SO4 . 
E 3 DMS A 1 1689 1689 DMS DMS . 
F 2 SO4 B 1 1687 1687 SO4 SO4 . 
G 2 SO4 B 1 1688 1688 SO4 SO4 . 
H 3 DMS B 1 1689 1689 DMS DMS . 
I 4 BI9 B 1 1690 1690 BI9 BI9 . 
J 5 HOH A 1 2001 2001 HOH HOH . 
J 5 HOH A 2 2002 2002 HOH HOH . 
J 5 HOH A 3 2003 2003 HOH HOH . 
J 5 HOH A 4 2004 2004 HOH HOH . 
J 5 HOH A 5 2005 2005 HOH HOH . 
J 5 HOH A 6 2006 2006 HOH HOH . 
J 5 HOH A 7 2007 2007 HOH HOH . 
J 5 HOH A 8 2008 2008 HOH HOH . 
J 5 HOH A 9 2009 2009 HOH HOH . 
J 5 HOH A 10 2010 2010 HOH HOH . 
J 5 HOH A 11 2011 2011 HOH HOH . 
J 5 HOH A 12 2012 2012 HOH HOH . 
J 5 HOH A 13 2013 2013 HOH HOH . 
J 5 HOH A 14 2014 2014 HOH HOH . 
J 5 HOH A 15 2015 2015 HOH HOH . 
J 5 HOH A 16 2016 2016 HOH HOH . 
J 5 HOH A 17 2017 2017 HOH HOH . 
J 5 HOH A 18 2018 2018 HOH HOH . 
J 5 HOH A 19 2019 2019 HOH HOH . 
J 5 HOH A 20 2020 2020 HOH HOH . 
J 5 HOH A 21 2021 2021 HOH HOH . 
J 5 HOH A 22 2022 2022 HOH HOH . 
J 5 HOH A 23 2023 2023 HOH HOH . 
J 5 HOH A 24 2024 2024 HOH HOH . 
J 5 HOH A 25 2025 2025 HOH HOH . 
J 5 HOH A 26 2026 2026 HOH HOH . 
J 5 HOH A 27 2027 2027 HOH HOH . 
J 5 HOH A 28 2028 2028 HOH HOH . 
J 5 HOH A 29 2029 2029 HOH HOH . 
J 5 HOH A 30 2030 2030 HOH HOH . 
J 5 HOH A 31 2031 2031 HOH HOH . 
J 5 HOH A 32 2032 2032 HOH HOH . 
J 5 HOH A 33 2033 2033 HOH HOH . 
J 5 HOH A 34 2034 2034 HOH HOH . 
J 5 HOH A 35 2035 2035 HOH HOH . 
J 5 HOH A 36 2036 2036 HOH HOH . 
J 5 HOH A 37 2037 2037 HOH HOH . 
J 5 HOH A 38 2038 2038 HOH HOH . 
J 5 HOH A 39 2039 2039 HOH HOH . 
J 5 HOH A 40 2040 2040 HOH HOH . 
J 5 HOH A 41 2041 2041 HOH HOH . 
J 5 HOH A 42 2042 2042 HOH HOH . 
J 5 HOH A 43 2043 2043 HOH HOH . 
J 5 HOH A 44 2044 2044 HOH HOH . 
J 5 HOH A 45 2045 2045 HOH HOH . 
J 5 HOH A 46 2046 2046 HOH HOH . 
J 5 HOH A 47 2047 2047 HOH HOH . 
J 5 HOH A 48 2048 2048 HOH HOH . 
J 5 HOH A 49 2049 2049 HOH HOH . 
J 5 HOH A 50 2050 2050 HOH HOH . 
J 5 HOH A 51 2051 2051 HOH HOH . 
J 5 HOH A 52 2052 2052 HOH HOH . 
J 5 HOH A 53 2053 2053 HOH HOH . 
J 5 HOH A 54 2054 2054 HOH HOH . 
J 5 HOH A 55 2055 2055 HOH HOH . 
J 5 HOH A 56 2056 2056 HOH HOH . 
J 5 HOH A 57 2057 2057 HOH HOH . 
J 5 HOH A 58 2058 2058 HOH HOH . 
J 5 HOH A 59 2059 2059 HOH HOH . 
J 5 HOH A 60 2060 2060 HOH HOH . 
J 5 HOH A 61 2061 2061 HOH HOH . 
J 5 HOH A 62 2062 2062 HOH HOH . 
J 5 HOH A 63 2063 2063 HOH HOH . 
J 5 HOH A 64 2064 2064 HOH HOH . 
J 5 HOH A 65 2065 2065 HOH HOH . 
J 5 HOH A 66 2066 2066 HOH HOH . 
J 5 HOH A 67 2067 2067 HOH HOH . 
J 5 HOH A 68 2068 2068 HOH HOH . 
J 5 HOH A 69 2069 2069 HOH HOH . 
J 5 HOH A 70 2070 2070 HOH HOH . 
J 5 HOH A 71 2071 2071 HOH HOH . 
J 5 HOH A 72 2072 2072 HOH HOH . 
J 5 HOH A 73 2073 2073 HOH HOH . 
J 5 HOH A 74 2074 2074 HOH HOH . 
J 5 HOH A 75 2075 2075 HOH HOH . 
J 5 HOH A 76 2076 2076 HOH HOH . 
K 5 HOH B 1 2001 2001 HOH HOH . 
K 5 HOH B 2 2002 2002 HOH HOH . 
K 5 HOH B 3 2003 2003 HOH HOH . 
K 5 HOH B 4 2004 2004 HOH HOH . 
K 5 HOH B 5 2005 2005 HOH HOH . 
K 5 HOH B 6 2006 2006 HOH HOH . 
K 5 HOH B 7 2007 2007 HOH HOH . 
K 5 HOH B 8 2008 2008 HOH HOH . 
K 5 HOH B 9 2009 2009 HOH HOH . 
K 5 HOH B 10 2010 2010 HOH HOH . 
K 5 HOH B 11 2011 2011 HOH HOH . 
K 5 HOH B 12 2012 2012 HOH HOH . 
K 5 HOH B 13 2013 2013 HOH HOH . 
K 5 HOH B 14 2014 2014 HOH HOH . 
K 5 HOH B 15 2015 2015 HOH HOH . 
K 5 HOH B 16 2016 2016 HOH HOH . 
K 5 HOH B 17 2017 2017 HOH HOH . 
K 5 HOH B 18 2018 2018 HOH HOH . 
K 5 HOH B 19 2019 2019 HOH HOH . 
K 5 HOH B 20 2020 2020 HOH HOH . 
K 5 HOH B 21 2021 2021 HOH HOH . 
K 5 HOH B 22 2022 2022 HOH HOH . 
K 5 HOH B 23 2023 2023 HOH HOH . 
K 5 HOH B 24 2024 2024 HOH HOH . 
K 5 HOH B 25 2025 2025 HOH HOH . 
K 5 HOH B 26 2026 2026 HOH HOH . 
K 5 HOH B 27 2027 2027 HOH HOH . 
K 5 HOH B 28 2028 2028 HOH HOH . 
K 5 HOH B 29 2029 2029 HOH HOH . 
K 5 HOH B 30 2030 2030 HOH HOH . 
K 5 HOH B 31 2031 2031 HOH HOH . 
K 5 HOH B 32 2032 2032 HOH HOH . 
K 5 HOH B 33 2033 2033 HOH HOH . 
K 5 HOH B 34 2034 2034 HOH HOH . 
K 5 HOH B 35 2035 2035 HOH HOH . 
K 5 HOH B 36 2036 2036 HOH HOH . 
K 5 HOH B 37 2037 2037 HOH HOH . 
K 5 HOH B 38 2038 2038 HOH HOH . 
K 5 HOH B 39 2039 2039 HOH HOH . 
K 5 HOH B 40 2040 2040 HOH HOH . 
K 5 HOH B 41 2041 2041 HOH HOH . 
K 5 HOH B 42 2042 2042 HOH HOH . 
K 5 HOH B 43 2043 2043 HOH HOH . 
K 5 HOH B 44 2044 2044 HOH HOH . 
K 5 HOH B 45 2045 2045 HOH HOH . 
K 5 HOH B 46 2046 2046 HOH HOH . 
K 5 HOH B 47 2047 2047 HOH HOH . 
K 5 HOH B 48 2048 2048 HOH HOH . 
K 5 HOH B 49 2049 2049 HOH HOH . 
K 5 HOH B 50 2050 2050 HOH HOH . 
K 5 HOH B 51 2051 2051 HOH HOH . 
K 5 HOH B 52 2052 2052 HOH HOH . 
K 5 HOH B 53 2053 2053 HOH HOH . 
K 5 HOH B 54 2054 2054 HOH HOH . 
K 5 HOH B 55 2055 2055 HOH HOH . 
K 5 HOH B 56 2056 2056 HOH HOH . 
K 5 HOH B 57 2057 2057 HOH HOH . 
K 5 HOH B 58 2058 2058 HOH HOH . 
K 5 HOH B 59 2059 2059 HOH HOH . 
K 5 HOH B 60 2060 2060 HOH HOH . 
K 5 HOH B 61 2061 2061 HOH HOH . 
K 5 HOH B 62 2062 2062 HOH HOH . 
K 5 HOH B 63 2063 2063 HOH HOH . 
K 5 HOH B 64 2064 2064 HOH HOH . 
K 5 HOH B 65 2065 2065 HOH HOH . 
K 5 HOH B 66 2066 2066 HOH HOH . 
K 5 HOH B 67 2067 2067 HOH HOH . 
K 5 HOH B 68 2068 2068 HOH HOH . 
K 5 HOH B 69 2069 2069 HOH HOH . 
K 5 HOH B 70 2070 2070 HOH HOH . 
K 5 HOH B 71 2071 2071 HOH HOH . 
K 5 HOH B 72 2072 2072 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C CBC BI9 . . . I 4 15.047 17.452 27.458 1 61.56 ? CBC BI9 1690 B 1 
HETATM 2 C CBE BI9 . . . I 4 14.273 17.819 28.715 1 61.69 ? CBE BI9 1690 B 1 
HETATM 3 O OBG BI9 . . . I 4 14.498 19.202 29.102 1 62.03 ? OBG BI9 1690 B 1 
HETATM 4 C CBF BI9 . . . I 4 15.491 19.948 28.348 1 61.7 ? CBF BI9 1690 B 1 
HETATM 5 C CBD BI9 . . . I 4 16.711 19.135 28.346 1 61.43 ? CBD BI9 1690 B 1 
HETATM 6 N NBB BI9 . . . I 4 16.476 17.863 27.59 1 60.84 ? NBB BI9 1690 B 1 
HETATM 7 C CBA BI9 . . . I 4 17.531 17.107 27.149 1 58.9 ? CBA BI9 1690 B 1 
HETATM 8 C CAY BI9 . . . I 4 18.804 17.678 26.99 1 57.62 ? CAY BI9 1690 B 1 
HETATM 9 C CAS BI9 . . . I 4 19.904 16.926 26.563 1 56.19 ? CAS BI9 1690 B 1 
HETATM 10 O OAT BI9 . . . I 4 21.165 17.438 26.382 1 55.47 ? OAT BI9 1690 B 1 
HETATM 11 C CAU BI9 . . . I 4 21.593 18.546 27.191 1 54.54 ? CAU BI9 1690 B 1 
HETATM 12 C CAX BI9 . . . I 4 17.411 15.739 26.857 1 58.01 ? CAX BI9 1690 B 1 
HETATM 13 C CAR BI9 . . . I 4 18.504 14.985 26.421 1 56.77 ? CAR BI9 1690 B 1 
HETATM 14 C CAL BI9 . . . I 4 19.767 15.569 26.277 1 55.55 ? CAL BI9 1690 B 1 
HETATM 15 N NAH BI9 . . . I 4 20.899 14.958 25.859 1 54.45 ? NAH BI9 1690 B 1 
HETATM 16 C C2 BI9 . . . I 4 21.119 13.639 26.016 1 53.41 ? C2 BI9 1690 B 1 
HETATM 17 N N3 BI9 . . . I 4 20.207 12.806 26.559 1 53.2 ? N3 BI9 1690 B 1 
HETATM 18 N N1 BI9 . . . I 4 22.305 13.153 25.596 1 52.03 ? N1 BI9 1690 B 1 
HETATM 19 C C6 BI9 . . . I 4 22.598 11.791 25.725 1 51.88 ? C6 BI9 1690 B 1 
HETATM 20 C C5 BI9 . . . I 4 21.642 10.963 26.293 1 53.06 ? C5 BI9 1690 B 1 
HETATM 21 CL CL5 BI9 . . . I 4 21.918 9.362 26.443 1 54.51 ? CL5 BI9 1690 B 1 
HETATM 22 C C4 BI9 . . . I 4 20.426 11.486 26.705 1 53.26 ? C4 BI9 1690 B 1 
HETATM 23 N NAE BI9 . . . I 4 19.551 10.603 27.243 1 54.34 ? NAE BI9 1690 B 1 
HETATM 24 C CAJ BI9 . . . I 4 18.293 10.991 27.524 1 54.67 ? CAJ BI9 1690 B 1 
HETATM 25 C CAQ BI9 . . . I 4 18.035 12.209 28.16 1 54.72 ? CAQ BI9 1690 B 1 
HETATM 26 C CAW BI9 . . . I 4 16.736 12.599 28.446 1 55.2 ? CAW BI9 1690 B 1 
HETATM 27 C CAZ BI9 . . . I 4 15.678 11.766 28.117 1 55.13 ? CAZ BI9 1690 B 1 
HETATM 28 C CAV BI9 . . . I 4 15.923 10.547 27.499 1 55.35 ? CAV BI9 1690 B 1 
HETATM 29 C CAP BI9 . . . I 4 17.226 10.133 27.183 1 55.24 ? CAP BI9 1690 B 1 
HETATM 30 C CAO BI9 . . . I 4 17.413 8.883 26.567 1 55.31 ? CAO BI9 1690 B 1 
HETATM 31 O OAI BI9 . . . I 4 18.461 8.257 26.745 1 54.93 ? OAI BI9 1690 B 1 
HETATM 32 N NAN BI9 . . . I 4 16.368 8.408 25.841 1 54.87 ? NAN BI9 1690 B 1 
HETATM 33 C CAM BI9 . . . I 4 16.496 7.088 25.213 1 54.83 ? CAM BI9 1690 B 1 
#
_model_server_stats.io_time_ms              19 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    8 
_model_server_stats.query_time_ms           304 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           33 
#