data_4D8A # _model_server_result.job_id d07IYrmBdevLPvOTvKvv5w _model_server_result.datetime_utc '2024-11-23 22:47:13' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4d8a # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":301}' # _entry.id 4D8A # _exptl.entry_id 4D8A _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 8 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4D8A _cell.length_a 98.177 _cell.length_b 98.177 _cell.length_c 262.867 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4D8A _symmetry.cell_setting ? _symmetry.Int_Tables_number 180 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 62 2 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 PISA tetrameric 4 software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,N 1 1,2 B,H,I,J,K,L,M,O 2 1,3 B,H,I,J,K,L,M,O 3 1,3 A,C,D,E,F,G,N 3 4,5 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_565 -x,-y+1,z -1 0 0 0 -1 0 0 0 1 -49.0885 85.023776 0 3 'crystal symmetry operation' 4_455 -x-1,-y,z -1 0 0 0 -1 0 0 0 1 -98.177 0 0 4 'crystal symmetry operation' 3_455 -x+y-1,-x,z+1/3 -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 -98.177 0 87.622333 5 'crystal symmetry operation' 6_555 x-y,x,z+1/3 0.5 -0.866025 0 0.866025 0.5 0 0 0 1 0 0 87.622333 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N ? 3 F N N ? 3 H N N ? 3 I N N ? 3 J N N ? 3 K N N ? 3 L N N # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 324 n n S O2 SO4 doub 325 n n S O3 SO4 sing 326 n n S O4 SO4 sing 327 n n # _atom_sites.entry_id 4D8A _atom_sites.fract_transf_matrix[1][1] 0.010186 _atom_sites.fract_transf_matrix[1][2] 0.005881 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011761 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.003804 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 LYS A 1 301 274 LYS LYS . D 3 SO4 A 1 302 1 SO4 SO4 . E 3 SO4 A 1 303 3 SO4 SO4 . F 3 SO4 A 1 304 2 SO4 SO4 . G 4 0HY A 1 305 1 0HY LIG . H 3 SO4 B 1 301 2 SO4 SO4 . I 3 SO4 B 1 302 4 SO4 SO4 . J 3 SO4 B 1 303 5 SO4 SO4 . K 3 SO4 B 1 304 1 SO4 SO4 . L 3 SO4 B 1 305 1 SO4 SO4 . M 4 0HY B 1 306 1 0HY LIG . N 5 HOH A 1 401 4 HOH HOH . N 5 HOH A 2 402 7 HOH HOH . N 5 HOH A 3 403 9 HOH HOH . N 5 HOH A 4 404 10 HOH HOH . N 5 HOH A 5 405 11 HOH HOH . N 5 HOH A 6 406 12 HOH HOH . N 5 HOH A 7 407 13 HOH HOH . N 5 HOH A 8 408 14 HOH HOH . N 5 HOH A 9 409 15 HOH HOH . N 5 HOH A 10 410 18 HOH HOH . N 5 HOH A 11 411 20 HOH HOH . N 5 HOH A 12 412 25 HOH HOH . O 5 HOH B 1 401 5 HOH HOH . O 5 HOH B 2 402 6 HOH HOH . O 5 HOH B 3 403 8 HOH HOH . O 5 HOH B 4 404 16 HOH HOH . O 5 HOH B 5 405 17 HOH HOH . O 5 HOH B 6 406 19 HOH HOH . O 5 HOH B 7 407 21 HOH HOH . O 5 HOH B 8 408 22 HOH HOH . O 5 HOH B 9 409 24 HOH HOH . O 5 HOH B 10 410 1 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . H 3 -34.062 -12.563 42.767 1 97.85 ? S SO4 301 B 1 HETATM 2 O O1 SO4 . . . H 3 -34.267 -12.931 41.369 1 103.43 ? O1 SO4 301 B 1 HETATM 3 O O2 SO4 . . . H 3 -35.266 -12.923 43.516 1 101.3 ? O2 SO4 301 B 1 HETATM 4 O O3 SO4 . . . H 3 -32.917 -13.298 43.304 1 96.15 ? O3 SO4 301 B 1 HETATM 5 O O4 SO4 . . . H 3 -33.802 -11.125 42.861 1 92.24 ? O4 SO4 301 B 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 274 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 5 #