data_4D9P
#
_model_server_result.job_id            etLEG8SYiJ6jWf27TvWoBg 
_model_server_result.datetime_utc      '2024-11-23 19:58:00' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4d9p 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":302}' 
#
_entry.id    4D9P 
#
_exptl.entry_id    4D9P 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              96.063 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'SULFATE ION' 
_entity.pdbx_number_of_molecules    10 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            4D9P 
_cell.length_a            99.667 
_cell.length_b            99.667 
_cell.length_c            261.081 
_cell.Z_PDB               24 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4D9P 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        180 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 62 2 2' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
PISA tetrameric 4 software_defined_assembly 3 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,E,F,G,H,O 1 1,2 
B,I,J,K,L,M,N,P 2 1,3 
A,C,D,E,F,G,H,O 3 1,2 
B,I,J,K,L,M,N,P 3 4,5 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 4_565 -x,-y+1,z -1 0 0 0 -1 0 0 0 1 -49.8335 86.314154 0 
3 'crystal symmetry operation' 4_455 -x-1,-y,z -1 0 0 0 -1 0 0 0 1 -99.667 0 0 
4 'crystal symmetry operation' 2_564 -y,x-y+1,z-1/3 -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 -49.8335 86.314154 -87.027 
5 'crystal symmetry operation' 5_554 y,-x+y,z-1/3 0.5 0.866025 0 -0.866025 0.5 0 0 0 1 0 0 -87.027 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
? 2 E N N 
? 2 F N N 
? 2 G N N 
? 2 I N N 
? 2 J N N 
? 2 K N N 
? 2 L N N 
? 2 M N N 
#
_chem_comp.formula           'O4 S -2' 
_chem_comp.formula_weight    96.063 
_chem_comp.id                SO4 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'SULFATE ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
S O1 SO4 doub 290 n n 
S O2 SO4 doub 291 n n 
S O3 SO4 sing 292 n n 
S O4 SO4 sing 293 n n 
#
_atom_sites.entry_id                     4D9P 
_atom_sites.fract_transf_matrix[1][1]    0.010033 
_atom_sites.fract_transf_matrix[1][2]    0.005793 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011586 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.00383 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 SO4 A 1 301 2 SO4 SO4 . 
D 2 SO4 A 1 302 5 SO4 SO4 . 
E 2 SO4 A 1 303 8 SO4 SO4 . 
F 2 SO4 A 1 304 9 SO4 SO4 . 
G 2 SO4 A 1 305 10 SO4 SO4 . 
H 3 Z17 A 1 306 1 Z17 Z17 . 
I 2 SO4 B 1 301 1 SO4 SO4 . 
J 2 SO4 B 1 302 3 SO4 SO4 . 
K 2 SO4 B 1 303 4 SO4 SO4 . 
L 2 SO4 B 1 304 6 SO4 SO4 . 
M 2 SO4 B 1 305 7 SO4 SO4 . 
N 3 Z17 B 1 306 1 Z17 Z17 . 
O 4 HOH A 1 401 2 HOH HOH . 
O 4 HOH A 2 402 4 HOH HOH . 
O 4 HOH A 3 403 5 HOH HOH . 
O 4 HOH A 4 404 7 HOH HOH . 
O 4 HOH A 5 405 9 HOH HOH . 
O 4 HOH A 6 406 10 HOH HOH . 
O 4 HOH A 7 407 11 HOH HOH . 
O 4 HOH A 8 408 13 HOH HOH . 
O 4 HOH A 9 409 14 HOH HOH . 
O 4 HOH A 10 410 16 HOH HOH . 
O 4 HOH A 11 411 18 HOH HOH . 
O 4 HOH A 12 412 21 HOH HOH . 
O 4 HOH A 13 413 23 HOH HOH . 
O 4 HOH A 14 414 24 HOH HOH . 
O 4 HOH A 15 415 25 HOH HOH . 
O 4 HOH A 16 416 26 HOH HOH . 
O 4 HOH A 17 417 28 HOH HOH . 
O 4 HOH A 18 418 32 HOH HOH . 
O 4 HOH A 19 419 33 HOH HOH . 
O 4 HOH A 20 420 37 HOH HOH . 
O 4 HOH A 21 421 38 HOH HOH . 
O 4 HOH A 22 422 4 HOH HOH . 
O 4 HOH A 23 423 5 HOH HOH . 
O 4 HOH A 24 424 6 HOH HOH . 
O 4 HOH A 25 425 9 HOH HOH . 
O 4 HOH A 26 426 12 HOH HOH . 
O 4 HOH A 27 427 13 HOH HOH . 
P 4 HOH B 1 401 1 HOH HOH . 
P 4 HOH B 2 402 3 HOH HOH . 
P 4 HOH B 3 403 6 HOH HOH . 
P 4 HOH B 4 404 8 HOH HOH . 
P 4 HOH B 5 405 12 HOH HOH . 
P 4 HOH B 6 406 17 HOH HOH . 
P 4 HOH B 7 407 19 HOH HOH . 
P 4 HOH B 8 408 20 HOH HOH . 
P 4 HOH B 9 409 27 HOH HOH . 
P 4 HOH B 10 410 29 HOH HOH . 
P 4 HOH B 11 411 30 HOH HOH . 
P 4 HOH B 12 412 31 HOH HOH . 
P 4 HOH B 13 413 34 HOH HOH . 
P 4 HOH B 14 414 35 HOH HOH . 
P 4 HOH B 15 415 36 HOH HOH . 
P 4 HOH B 16 416 39 HOH HOH . 
P 4 HOH B 17 417 1 HOH HOH . 
P 4 HOH B 18 418 2 HOH HOH . 
P 4 HOH B 19 419 3 HOH HOH . 
P 4 HOH B 20 420 7 HOH HOH . 
P 4 HOH B 21 421 8 HOH HOH . 
P 4 HOH B 22 422 10 HOH HOH . 
P 4 HOH B 23 423 1 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 S S SO4 . . . D 2 -18.683 31.631 18.979 1 100.7 ? S SO4 302 A 1 
HETATM 2 O O1 SO4 . . . D 2 -18.498 30.809 17.777 1 99.92 ? O1 SO4 302 A 1 
HETATM 3 O O2 SO4 . . . D 2 -19.822 32.543 18.825 1 99.65 ? O2 SO4 302 A 1 
HETATM 4 O O3 SO4 . . . D 2 -18.958 30.743 20.102 1 100.57 ? O3 SO4 302 A 1 
HETATM 5 O O4 SO4 . . . D 2 -17.464 32.397 19.261 1 99.74 ? O4 SO4 302 A 1 
#
_model_server_stats.io_time_ms              13 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    7 
_model_server_stats.query_time_ms           270 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           5 
#