data_4DA5 # _model_server_result.job_id eKMyqBbsLjMhg72JM31E5w _model_server_result.datetime_utc '2024-11-25 22:41:31' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4da5 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":502}' # _entry.id 4DA5 # _exptl.entry_id 4DA5 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 374.348 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (3R)-1-azabicyclo[2.2.2]oct-3-yl[bis(5-chlorothiophen-2-yl)]methanol _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4DA5 _cell.length_a 55.84 _cell.length_b 121.69 _cell.length_c 131.73 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4DA5 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 F N N # _chem_comp.formula 'C16 H17 Cl2 N O S2' _chem_comp.formula_weight 374.348 _chem_comp.id 0H7 _chem_comp.mon_nstd_flag . _chem_comp.name (3R)-1-azabicyclo[2.2.2]oct-3-yl[bis(5-chlorothiophen-2-yl)]methanol _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CL2 C20 0H7 sing 1 n n C19 C20 0H7 doub 2 n y C19 C18 0H7 sing 3 n y C20 S22 0H7 sing 4 n y C18 C17 0H7 doub 5 n y S22 C17 0H7 sing 6 n y C17 C2 0H7 sing 7 n n S16 C14 0H7 sing 8 n y S16 C11 0H7 sing 9 n y CL1 C14 0H7 sing 10 n n O1 C2 0H7 sing 11 n n C14 C13 0H7 doub 12 n y C2 C11 0H7 sing 13 n n C2 C3 0H7 sing 14 n n C11 C12 0H7 doub 15 n y C13 C12 0H7 sing 16 n y C4 C3 0H7 sing 17 n n C4 N5 0H7 sing 18 n n C3 C8 0H7 sing 19 n n C6 N5 0H7 sing 20 n n C6 C7 0H7 sing 21 n n N5 C10 0H7 sing 22 n n C7 C8 0H7 sing 23 n n C8 C9 0H7 sing 24 n n C10 C9 0H7 sing 25 n n O1 H1 0H7 sing 26 n n C3 H2 0H7 sing 27 n n C4 H3 0H7 sing 28 n n C4 H4 0H7 sing 29 n n C6 H6 0H7 sing 30 n n C6 H7 0H7 sing 31 n n C7 H8 0H7 sing 32 n n C7 H9 0H7 sing 33 n n C8 H10 0H7 sing 34 n n C9 H11 0H7 sing 35 n n C9 H12 0H7 sing 36 n n C10 H13 0H7 sing 37 n n C10 H14 0H7 sing 38 n n C12 H15 0H7 sing 39 n n C13 H16 0H7 sing 40 n n C18 H17 0H7 sing 41 n n C19 H18 0H7 sing 42 n n # _atom_sites.entry_id 4DA5 _atom_sites.fract_transf_matrix[1][1] 0.017908 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008218 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007591 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 SO4 A 1 501 2 SO4 SO4 . D 3 0H7 A 1 502 1 0H7 0H7 . E 2 SO4 B 1 501 1 SO4 SO4 . F 3 0H7 B 1 502 1 0H7 0H7 . G 4 HOH A 1 601 3 HOH HOH . G 4 HOH A 2 602 7 HOH HOH . G 4 HOH A 3 603 9 HOH HOH . G 4 HOH A 4 604 11 HOH HOH . G 4 HOH A 5 605 14 HOH HOH . G 4 HOH A 6 606 15 HOH HOH . G 4 HOH A 7 607 18 HOH HOH . G 4 HOH A 8 608 20 HOH HOH . G 4 HOH A 9 609 21 HOH HOH . G 4 HOH A 10 610 22 HOH HOH . G 4 HOH A 11 611 25 HOH HOH . G 4 HOH A 12 612 27 HOH HOH . G 4 HOH A 13 613 28 HOH HOH . G 4 HOH A 14 614 30 HOH HOH . G 4 HOH A 15 615 34 HOH HOH . G 4 HOH A 16 616 35 HOH HOH . G 4 HOH A 17 617 36 HOH HOH . G 4 HOH A 18 618 37 HOH HOH . G 4 HOH A 19 619 38 HOH HOH . G 4 HOH A 20 620 49 HOH HOH . G 4 HOH A 21 621 53 HOH HOH . G 4 HOH A 22 622 54 HOH HOH . G 4 HOH A 23 623 56 HOH HOH . G 4 HOH A 24 624 58 HOH HOH . G 4 HOH A 25 625 61 HOH HOH . G 4 HOH A 26 626 62 HOH HOH . G 4 HOH A 27 627 64 HOH HOH . G 4 HOH A 28 628 69 HOH HOH . G 4 HOH A 29 629 71 HOH HOH . G 4 HOH A 30 630 73 HOH HOH . G 4 HOH A 31 631 76 HOH HOH . G 4 HOH A 32 632 78 HOH HOH . G 4 HOH A 33 633 79 HOH HOH . G 4 HOH A 34 634 80 HOH HOH . G 4 HOH A 35 635 81 HOH HOH . G 4 HOH A 36 636 83 HOH HOH . G 4 HOH A 37 637 84 HOH HOH . G 4 HOH A 38 638 88 HOH HOH . G 4 HOH A 39 639 91 HOH HOH . G 4 HOH A 40 640 92 HOH HOH . G 4 HOH A 41 641 93 HOH HOH . G 4 HOH A 42 642 96 HOH HOH . G 4 HOH A 43 643 97 HOH HOH . G 4 HOH A 44 644 98 HOH HOH . G 4 HOH A 45 645 101 HOH HOH . G 4 HOH A 46 646 102 HOH HOH . G 4 HOH A 47 647 105 HOH HOH . G 4 HOH A 48 648 108 HOH HOH . G 4 HOH A 49 649 115 HOH HOH . G 4 HOH A 50 650 117 HOH HOH . G 4 HOH A 51 651 121 HOH HOH . G 4 HOH A 52 652 124 HOH HOH . G 4 HOH A 53 653 132 HOH HOH . G 4 HOH A 54 654 135 HOH HOH . G 4 HOH A 55 655 137 HOH HOH . G 4 HOH A 56 656 139 HOH HOH . G 4 HOH A 57 657 140 HOH HOH . G 4 HOH A 58 658 147 HOH HOH . G 4 HOH A 59 659 152 HOH HOH . G 4 HOH A 60 660 154 HOH HOH . G 4 HOH A 61 661 156 HOH HOH . G 4 HOH A 62 662 163 HOH HOH . G 4 HOH A 63 663 168 HOH HOH . G 4 HOH A 64 664 172 HOH HOH . G 4 HOH A 65 665 174 HOH HOH . G 4 HOH A 66 666 177 HOH HOH . G 4 HOH A 67 667 180 HOH HOH . G 4 HOH A 68 668 184 HOH HOH . G 4 HOH A 69 669 191 HOH HOH . G 4 HOH A 70 670 192 HOH HOH . G 4 HOH A 71 671 193 HOH HOH . G 4 HOH A 72 672 202 HOH HOH . G 4 HOH A 73 673 205 HOH HOH . G 4 HOH A 74 674 206 HOH HOH . G 4 HOH A 75 675 212 HOH HOH . G 4 HOH A 76 676 218 HOH HOH . G 4 HOH A 77 677 221 HOH HOH . G 4 HOH A 78 678 224 HOH HOH . G 4 HOH A 79 679 232 HOH HOH . G 4 HOH A 80 680 233 HOH HOH . G 4 HOH A 81 681 236 HOH HOH . G 4 HOH A 82 682 238 HOH HOH . G 4 HOH A 83 683 239 HOH HOH . G 4 HOH A 84 684 241 HOH HOH . G 4 HOH A 85 685 242 HOH HOH . G 4 HOH A 86 686 243 HOH HOH . G 4 HOH A 87 687 244 HOH HOH . G 4 HOH A 88 688 247 HOH HOH . G 4 HOH A 89 689 250 HOH HOH . G 4 HOH A 90 690 265 HOH HOH . G 4 HOH A 91 691 267 HOH HOH . G 4 HOH A 92 692 268 HOH HOH . G 4 HOH A 93 693 272 HOH HOH . G 4 HOH A 94 694 275 HOH HOH . G 4 HOH A 95 695 280 HOH HOH . G 4 HOH A 96 696 290 HOH HOH . G 4 HOH A 97 697 294 HOH HOH . G 4 HOH A 98 698 298 HOH HOH . G 4 HOH A 99 699 309 HOH HOH . G 4 HOH A 100 700 311 HOH HOH . G 4 HOH A 101 701 315 HOH HOH . G 4 HOH A 102 702 318 HOH HOH . G 4 HOH A 103 703 325 HOH HOH . G 4 HOH A 104 704 326 HOH HOH . G 4 HOH A 105 705 329 HOH HOH . G 4 HOH A 106 706 330 HOH HOH . G 4 HOH A 107 707 338 HOH HOH . G 4 HOH A 108 708 344 HOH HOH . G 4 HOH A 109 709 345 HOH HOH . G 4 HOH A 110 710 351 HOH HOH . G 4 HOH A 111 711 385 HOH HOH . G 4 HOH A 112 712 389 HOH HOH . G 4 HOH A 113 713 390 HOH HOH . G 4 HOH A 114 714 395 HOH HOH . G 4 HOH A 115 715 404 HOH HOH . G 4 HOH A 116 716 410 HOH HOH . G 4 HOH A 117 717 420 HOH HOH . G 4 HOH A 118 718 422 HOH HOH . G 4 HOH A 119 719 425 HOH HOH . G 4 HOH A 120 720 434 HOH HOH . G 4 HOH A 121 721 446 HOH HOH . G 4 HOH A 122 722 447 HOH HOH . G 4 HOH A 123 723 448 HOH HOH . H 4 HOH B 1 601 1 HOH HOH . H 4 HOH B 2 602 2 HOH HOH . H 4 HOH B 3 603 4 HOH HOH . H 4 HOH B 4 604 5 HOH HOH . H 4 HOH B 5 605 6 HOH HOH . H 4 HOH B 6 606 8 HOH HOH . H 4 HOH B 7 607 12 HOH HOH . H 4 HOH B 8 608 13 HOH HOH . H 4 HOH B 9 609 16 HOH HOH . H 4 HOH B 10 610 17 HOH HOH . H 4 HOH B 11 611 19 HOH HOH . H 4 HOH B 12 612 24 HOH HOH . H 4 HOH B 13 613 26 HOH HOH . H 4 HOH B 14 614 29 HOH HOH . H 4 HOH B 15 615 33 HOH HOH . H 4 HOH B 16 616 39 HOH HOH . H 4 HOH B 17 617 40 HOH HOH . H 4 HOH B 18 618 41 HOH HOH . H 4 HOH B 19 619 42 HOH HOH . H 4 HOH B 20 620 43 HOH HOH . H 4 HOH B 21 621 44 HOH HOH . H 4 HOH B 22 622 45 HOH HOH . H 4 HOH B 23 623 46 HOH HOH . H 4 HOH B 24 624 47 HOH HOH . H 4 HOH B 25 625 48 HOH HOH . H 4 HOH B 26 626 52 HOH HOH . H 4 HOH B 27 627 59 HOH HOH . H 4 HOH B 28 628 65 HOH HOH . H 4 HOH B 29 629 66 HOH HOH . H 4 HOH B 30 630 67 HOH HOH . H 4 HOH B 31 631 68 HOH HOH . H 4 HOH B 32 632 74 HOH HOH . H 4 HOH B 33 633 77 HOH HOH . H 4 HOH B 34 634 82 HOH HOH . H 4 HOH B 35 635 85 HOH HOH . H 4 HOH B 36 636 94 HOH HOH . H 4 HOH B 37 637 95 HOH HOH . H 4 HOH B 38 638 100 HOH HOH . H 4 HOH B 39 639 106 HOH HOH . H 4 HOH B 40 640 111 HOH HOH . H 4 HOH B 41 641 112 HOH HOH . H 4 HOH B 42 642 113 HOH HOH . H 4 HOH B 43 643 116 HOH HOH . H 4 HOH B 44 644 120 HOH HOH . H 4 HOH B 45 645 123 HOH HOH . H 4 HOH B 46 646 126 HOH HOH . H 4 HOH B 47 647 127 HOH HOH . H 4 HOH B 48 648 128 HOH HOH . H 4 HOH B 49 649 136 HOH HOH . H 4 HOH B 50 650 138 HOH HOH . H 4 HOH B 51 651 143 HOH HOH . H 4 HOH B 52 652 155 HOH HOH . H 4 HOH B 53 653 158 HOH HOH . H 4 HOH B 54 654 159 HOH HOH . H 4 HOH B 55 655 160 HOH HOH . H 4 HOH B 56 656 161 HOH HOH . H 4 HOH B 57 657 165 HOH HOH . H 4 HOH B 58 658 166 HOH HOH . H 4 HOH B 59 659 167 HOH HOH . H 4 HOH B 60 660 171 HOH HOH . H 4 HOH B 61 661 173 HOH HOH . H 4 HOH B 62 662 178 HOH HOH . H 4 HOH B 63 663 182 HOH HOH . H 4 HOH B 64 664 188 HOH HOH . H 4 HOH B 65 665 189 HOH HOH . H 4 HOH B 66 666 194 HOH HOH . H 4 HOH B 67 667 204 HOH HOH . H 4 HOH B 68 668 213 HOH HOH . H 4 HOH B 69 669 215 HOH HOH . H 4 HOH B 70 670 220 HOH HOH . H 4 HOH B 71 671 226 HOH HOH . H 4 HOH B 72 672 231 HOH HOH . H 4 HOH B 73 673 234 HOH HOH . H 4 HOH B 74 674 240 HOH HOH . H 4 HOH B 75 675 246 HOH HOH . H 4 HOH B 76 676 248 HOH HOH . H 4 HOH B 77 677 249 HOH HOH . H 4 HOH B 78 678 253 HOH HOH . H 4 HOH B 79 679 254 HOH HOH . H 4 HOH B 80 680 257 HOH HOH . H 4 HOH B 81 681 258 HOH HOH . H 4 HOH B 82 682 264 HOH HOH . H 4 HOH B 83 683 266 HOH HOH . H 4 HOH B 84 684 273 HOH HOH . H 4 HOH B 85 685 274 HOH HOH . H 4 HOH B 86 686 276 HOH HOH . H 4 HOH B 87 687 281 HOH HOH . H 4 HOH B 88 688 286 HOH HOH . H 4 HOH B 89 689 287 HOH HOH . H 4 HOH B 90 690 289 HOH HOH . H 4 HOH B 91 691 297 HOH HOH . H 4 HOH B 92 692 299 HOH HOH . H 4 HOH B 93 693 301 HOH HOH . H 4 HOH B 94 694 302 HOH HOH . H 4 HOH B 95 695 317 HOH HOH . H 4 HOH B 96 696 323 HOH HOH . H 4 HOH B 97 697 342 HOH HOH . H 4 HOH B 98 698 348 HOH HOH . H 4 HOH B 99 699 373 HOH HOH . H 4 HOH B 100 700 377 HOH HOH . H 4 HOH B 101 701 378 HOH HOH . H 4 HOH B 102 702 429 HOH HOH . H 4 HOH B 103 703 454 HOH HOH . H 4 HOH B 104 704 455 HOH HOH . H 4 HOH B 105 705 456 HOH HOH . H 4 HOH B 106 706 457 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 0H7 . . . F 3 7.851 24.175 26.842 1 78.87 ? O1 0H7 502 B 1 HETATM 2 C C2 0H7 . . . F 3 8.29 25.512 27.133 1 77.86 ? C2 0H7 502 B 1 HETATM 3 C C3 0H7 . . . F 3 7.63 26.046 28.435 1 69.29 ? C3 0H7 502 B 1 HETATM 4 C C4 0H7 . . . F 3 6.097 26.067 28.322 1 65.77 ? C4 0H7 502 B 1 HETATM 5 N N5 0H7 . . . F 3 5.524 25.308 29.447 1 62.1 ? N5 0H7 502 B 1 HETATM 6 C C6 0H7 . . . F 3 5.927 23.883 29.375 1 60.01 ? C6 0H7 502 B 1 HETATM 7 C C7 0H7 . . . F 3 7.445 23.767 29.566 1 59.84 ? C7 0H7 502 B 1 HETATM 8 C C8 0H7 . . . F 3 8.04 25.188 29.679 1 63.37 ? C8 0H7 502 B 1 HETATM 9 C C9 0H7 . . . F 3 7.431 25.839 30.929 1 62.41 ? C9 0H7 502 B 1 HETATM 10 C C10 0H7 . . . F 3 5.902 25.913 30.745 1 61.59 ? C10 0H7 502 B 1 HETATM 11 C C11 0H7 . . . F 3 9.78 25.56 27.28 1 78.64 ? C11 0H7 502 B 1 HETATM 12 C C12 0H7 . . . F 3 10.455 26.542 27.881 1 78.92 ? C12 0H7 502 B 1 HETATM 13 C C13 0H7 . . . F 3 11.819 26.441 27.794 1 80.12 ? C13 0H7 502 B 1 HETATM 14 C C14 0H7 . . . F 3 12.249 25.409 27.077 1 82.74 ? C14 0H7 502 B 1 HETATM 15 CL CL1 0H7 . . . F 3 13.899 25.029 26.78 1 89.35 ? CL1 0H7 502 B 1 HETATM 16 S S16 0H7 . . . F 3 10.898 24.482 26.469 1 78.89 ? S16 0H7 502 B 1 HETATM 17 C C17 0H7 . . . F 3 8.017 26.386 25.932 1 84.82 ? C17 0H7 502 B 1 HETATM 18 C C18 0H7 . . . F 3 7.829 25.937 24.679 1 87.1 ? C18 0H7 502 B 1 HETATM 19 C C19 0H7 . . . F 3 7.737 26.922 23.707 1 88.94 ? C19 0H7 502 B 1 HETATM 20 C C20 0H7 . . . F 3 7.927 28.168 24.153 1 91.24 ? C20 0H7 502 B 1 HETATM 21 CL CL2 0H7 . . . F 3 7.865 29.613 23.177 1 95.15 ? CL2 0H7 502 B 1 HETATM 22 S S22 0H7 . . . F 3 8.23 28.128 25.889 1 88.8 ? S22 0H7 502 B 1 # _model_server_stats.io_time_ms 18 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 17 _model_server_stats.query_time_ms 353 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 22 #