data_4DCM
#
_model_server_result.job_id            IB7sNCanI8ER7lphrnQAOQ 
_model_server_result.datetime_utc      '2025-03-13 16:55:39' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4dcm 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":402}' 
#
_entry.id    4DCM 
#
_exptl.entry_id    4DCM 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              106.12 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            DI(HYDROXYETHYL)ETHER 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          104.46 
_cell.angle_gamma         90 
_cell.entry_id            4DCM 
_cell.length_a            67.185 
_cell.length_b            42.134 
_cell.length_c            72.429 
_cell.Z_PDB               2 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4DCM 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 C N N 
? 3 D N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A C MSE 2 A MSE 8 1_555 A N ARG 3 A ARG 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? 
covale ? covale2 A C PHE 214 A PHE 220 1_555 A N MSE 215 A MSE 221 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? 
covale ? covale3 A C MSE 215 A MSE 221 1_555 A N GLN 216 A GLN 222 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? 
covale ? covale4 A C PRO 256 A PRO 262 1_555 A N MSE 257 A MSE 263 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? 
covale ? covale5 A C MSE 257 A MSE 263 1_555 A N ALA 258 A ALA 264 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? 
covale ? covale6 A C ASN 269 A ASN 275 1_555 A N MSE 270 A MSE 276 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? 
covale ? covale7 A C MSE 270 A MSE 276 1_555 A N PRO 271 A PRO 277 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.338 ? 
covale ? covale8 A C PHE 279 A PHE 285 1_555 A N MSE 280 A MSE 286 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? 
covale ? covale9 A C MSE 280 A MSE 286 1_555 A N ILE 281 A ILE 287 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? 
covale ? covale10 A C GLU 315 A GLU 321 1_555 A N MSE 316 A MSE 322 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? 
covale ? covale11 A C MSE 316 A MSE 322 1_555 A N PHE 317 A PHE 323 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? 
#
_chem_comp.formula           'C4 H10 O3' 
_chem_comp.formula_weight    106.12 
_chem_comp.id                PEG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              DI(HYDROXYETHYL)ETHER 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 PEG sing 237 n n 
C1 C2 PEG sing 238 n n 
C1 H11 PEG sing 239 n n 
C1 H12 PEG sing 240 n n 
O1 HO1 PEG sing 241 n n 
C2 O2 PEG sing 242 n n 
C2 H21 PEG sing 243 n n 
C2 H22 PEG sing 244 n n 
O2 C3 PEG sing 245 n n 
C3 C4 PEG sing 246 n n 
C3 H31 PEG sing 247 n n 
C3 H32 PEG sing 248 n n 
C4 O4 PEG sing 249 n n 
C4 H41 PEG sing 250 n n 
C4 H42 PEG sing 251 n n 
O4 HO4 PEG sing 252 n n 
#
_atom_sites.entry_id                     4DCM 
_atom_sites.fract_transf_matrix[1][1]    0.014884 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.003838 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.023734 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.014258 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 SAM A 1 401 1 SAM SAM . 
C 3 PEG A 1 402 1 PEG PEG . 
D 3 PEG A 1 403 2 PEG PEG . 
E 4 HOH A 1 501 2 HOH HOH . 
E 4 HOH A 2 502 3 HOH HOH . 
E 4 HOH A 3 503 4 HOH HOH . 
E 4 HOH A 4 504 5 HOH HOH . 
E 4 HOH A 5 505 6 HOH HOH . 
E 4 HOH A 6 506 7 HOH HOH . 
E 4 HOH A 7 507 8 HOH HOH . 
E 4 HOH A 8 508 10 HOH HOH . 
E 4 HOH A 9 509 11 HOH HOH . 
E 4 HOH A 10 510 12 HOH HOH . 
E 4 HOH A 11 511 13 HOH HOH . 
E 4 HOH A 12 512 14 HOH HOH . 
E 4 HOH A 13 513 15 HOH HOH . 
E 4 HOH A 14 514 16 HOH HOH . 
E 4 HOH A 15 515 17 HOH HOH . 
E 4 HOH A 16 516 18 HOH HOH . 
E 4 HOH A 17 517 19 HOH HOH . 
E 4 HOH A 18 518 20 HOH HOH . 
E 4 HOH A 19 519 21 HOH HOH . 
E 4 HOH A 20 520 22 HOH HOH . 
E 4 HOH A 21 521 23 HOH HOH . 
E 4 HOH A 22 522 24 HOH HOH . 
E 4 HOH A 23 523 25 HOH HOH . 
E 4 HOH A 24 524 26 HOH HOH . 
E 4 HOH A 25 525 27 HOH HOH . 
E 4 HOH A 26 526 28 HOH HOH . 
E 4 HOH A 27 527 29 HOH HOH . 
E 4 HOH A 28 528 30 HOH HOH . 
E 4 HOH A 29 529 31 HOH HOH . 
E 4 HOH A 30 530 32 HOH HOH . 
E 4 HOH A 31 531 33 HOH HOH . 
E 4 HOH A 32 532 34 HOH HOH . 
E 4 HOH A 33 533 35 HOH HOH . 
E 4 HOH A 34 534 36 HOH HOH . 
E 4 HOH A 35 535 37 HOH HOH . 
E 4 HOH A 36 536 38 HOH HOH . 
E 4 HOH A 37 537 39 HOH HOH . 
E 4 HOH A 38 538 40 HOH HOH . 
E 4 HOH A 39 539 41 HOH HOH . 
E 4 HOH A 40 540 42 HOH HOH . 
E 4 HOH A 41 541 43 HOH HOH . 
E 4 HOH A 42 542 44 HOH HOH . 
E 4 HOH A 43 543 45 HOH HOH . 
E 4 HOH A 44 544 46 HOH HOH . 
E 4 HOH A 45 545 47 HOH HOH . 
E 4 HOH A 46 546 48 HOH HOH . 
E 4 HOH A 47 547 49 HOH HOH . 
E 4 HOH A 48 548 50 HOH HOH . 
E 4 HOH A 49 549 51 HOH HOH . 
E 4 HOH A 50 550 52 HOH HOH . 
E 4 HOH A 51 551 53 HOH HOH . 
E 4 HOH A 52 552 54 HOH HOH . 
E 4 HOH A 53 553 55 HOH HOH . 
E 4 HOH A 54 554 56 HOH HOH . 
E 4 HOH A 55 555 57 HOH HOH . 
E 4 HOH A 56 556 58 HOH HOH . 
E 4 HOH A 57 557 59 HOH HOH . 
E 4 HOH A 58 558 60 HOH HOH . 
E 4 HOH A 59 559 61 HOH HOH . 
E 4 HOH A 60 560 62 HOH HOH . 
E 4 HOH A 61 561 63 HOH HOH . 
E 4 HOH A 62 562 64 HOH HOH . 
E 4 HOH A 63 563 65 HOH HOH . 
E 4 HOH A 64 564 66 HOH HOH . 
E 4 HOH A 65 565 67 HOH HOH . 
E 4 HOH A 66 566 68 HOH HOH . 
E 4 HOH A 67 567 69 HOH HOH . 
E 4 HOH A 68 568 70 HOH HOH . 
E 4 HOH A 69 569 71 HOH HOH . 
E 4 HOH A 70 570 72 HOH HOH . 
E 4 HOH A 71 571 73 HOH HOH . 
E 4 HOH A 72 572 74 HOH HOH . 
E 4 HOH A 73 573 75 HOH HOH . 
E 4 HOH A 74 574 76 HOH HOH . 
E 4 HOH A 75 575 77 HOH HOH . 
E 4 HOH A 76 576 78 HOH HOH . 
E 4 HOH A 77 577 79 HOH HOH . 
E 4 HOH A 78 578 80 HOH HOH . 
E 4 HOH A 79 579 81 HOH HOH . 
E 4 HOH A 80 580 82 HOH HOH . 
E 4 HOH A 81 581 83 HOH HOH . 
E 4 HOH A 82 582 84 HOH HOH . 
E 4 HOH A 83 583 85 HOH HOH . 
E 4 HOH A 84 584 86 HOH HOH . 
E 4 HOH A 85 585 87 HOH HOH . 
E 4 HOH A 86 586 88 HOH HOH . 
E 4 HOH A 87 587 89 HOH HOH . 
E 4 HOH A 88 588 90 HOH HOH . 
E 4 HOH A 89 589 91 HOH HOH . 
E 4 HOH A 90 590 92 HOH HOH . 
E 4 HOH A 91 591 93 HOH HOH . 
E 4 HOH A 92 592 94 HOH HOH . 
E 4 HOH A 93 593 95 HOH HOH . 
E 4 HOH A 94 594 96 HOH HOH . 
E 4 HOH A 95 595 97 HOH HOH . 
E 4 HOH A 96 596 98 HOH HOH . 
E 4 HOH A 97 597 99 HOH HOH . 
E 4 HOH A 98 598 100 HOH HOH . 
E 4 HOH A 99 599 101 HOH HOH . 
E 4 HOH A 100 600 102 HOH HOH . 
E 4 HOH A 101 601 103 HOH HOH . 
E 4 HOH A 102 602 104 HOH HOH . 
E 4 HOH A 103 603 105 HOH HOH . 
E 4 HOH A 104 604 106 HOH HOH . 
E 4 HOH A 105 605 107 HOH HOH . 
E 4 HOH A 106 606 108 HOH HOH . 
E 4 HOH A 107 607 109 HOH HOH . 
E 4 HOH A 108 608 110 HOH HOH . 
E 4 HOH A 109 609 111 HOH HOH . 
E 4 HOH A 110 610 112 HOH HOH . 
E 4 HOH A 111 611 113 HOH HOH . 
E 4 HOH A 112 612 114 HOH HOH . 
E 4 HOH A 113 613 115 HOH HOH . 
E 4 HOH A 114 614 116 HOH HOH . 
E 4 HOH A 115 615 117 HOH HOH . 
E 4 HOH A 116 616 118 HOH HOH . 
E 4 HOH A 117 617 119 HOH HOH . 
E 4 HOH A 118 618 120 HOH HOH . 
E 4 HOH A 119 619 121 HOH HOH . 
E 4 HOH A 120 620 122 HOH HOH . 
E 4 HOH A 121 621 123 HOH HOH . 
E 4 HOH A 122 622 124 HOH HOH . 
E 4 HOH A 123 623 125 HOH HOH . 
E 4 HOH A 124 624 126 HOH HOH . 
E 4 HOH A 125 625 127 HOH HOH . 
E 4 HOH A 126 626 128 HOH HOH . 
E 4 HOH A 127 627 129 HOH HOH . 
E 4 HOH A 128 628 130 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 PEG . . . C 3 46.894 13.91 25.094 1 44.95 ? C1 PEG 402 A 1 
HETATM 2 O O1 PEG . . . C 3 47.256 14.872 24.166 1 45.55 ? O1 PEG 402 A 1 
HETATM 3 C C2 PEG . . . C 3 47.914 12.896 25.512 1 45.63 ? C2 PEG 402 A 1 
HETATM 4 O O2 PEG . . . C 3 48.648 13.173 26.655 1 47.3 ? O2 PEG 402 A 1 
HETATM 5 C C3 PEG . . . C 3 49.288 12.181 27.381 1 42.75 ? C3 PEG 402 A 1 
HETATM 6 C C4 PEG . . . C 3 49.702 10.918 26.696 1 39.08 ? C4 PEG 402 A 1 
HETATM 7 O O4 PEG . . . C 3 48.838 9.839 26.783 1 39.12 ? O4 PEG 402 A 1 
#
_model_server_stats.io_time_ms              68 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           288 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           7 
#