data_4DD1
#
_model_server_result.job_id            fcdxn56fRYUd96iC9aDPQQ 
_model_server_result.datetime_utc      '2024-10-20 19:02:48' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4dd1 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"H","auth_seq_id":202}' 
#
_entry.id    4DD1 
#
_exptl.entry_id    4DD1 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              56.106 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            2-methylprop-1-ene 
_entity.pdbx_number_of_molecules    9 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            4DD1 
_cell.length_a            77.887 
_cell.length_b            78.703 
_cell.length_c            37.074 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4DD1 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 author_and_software_defined_assembly 1 
PISA monomeric 1 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,E,F,L 1 1 
B,G,H,I,J,K,M 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
? 2 E N N 
? 2 F N N 
? 2 G N N 
? 2 H N N 
? 2 I N N 
? 2 J N N 
? 2 K N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 6 A CYS 6 1_555 A SG CYS 127 A CYS 127 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.945 ? 
disulf ? disulf2 A SG CYS 30 A CYS 30 1_555 A SG CYS 115 A CYS 115 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.005 ? 
disulf ? disulf3 A SG CYS 64 A CYS 64 1_555 A SG CYS 80 A CYS 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? 
disulf ? disulf4 A SG CYS 76 A CYS 76 1_555 A SG CYS 94 A CYS 94 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? 
disulf ? disulf5 B SG CYS 6 B CYS 6 1_555 B SG CYS 127 B CYS 127 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.969 ? 
disulf ? disulf6 B SG CYS 30 B CYS 30 1_555 B SG CYS 115 B CYS 115 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.049 ? 
disulf ? disulf7 B SG CYS 64 B CYS 64 1_555 B SG CYS 80 B CYS 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? 
disulf ? disulf8 B SG CYS 76 B CYS 76 1_555 B SG CYS 94 B CYS 94 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? 
#
_chem_comp.formula           'C4 H8' 
_chem_comp.formula_weight    56.106 
_chem_comp.id                MEB 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              2-methylprop-1-ene 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 MEB doub 218 n n 
C1 C3 MEB sing 219 n n 
C1 C1' MEB sing 220 n n 
C2 H2 MEB sing 221 n n 
C2 H21 MEB sing 222 n n 
C3 H3 MEB sing 223 n n 
C3 H31 MEB sing 224 n n 
C3 H32 MEB sing 225 n n 
C1' "H1'1" MEB sing 226 n n 
C1' "H1'2" MEB sing 227 n n 
C1' "H1'3" MEB sing 228 n n 
#
_atom_sites.entry_id                     4DD1 
_atom_sites.fract_transf_matrix[1][1]    0.012839 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012706 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.026973 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 MEB A 1 201 1 MEB MEB . 
D 2 MEB A 1 202 1 MEB MEB . 
E 2 MEB A 1 203 1 MEB MEB . 
F 2 MEB A 1 204 1 MEB MEB . 
G 2 MEB B 1 201 1 MEB MEB . 
H 2 MEB B 1 202 1 MEB MEB . 
I 2 MEB B 1 203 1 MEB MEB . 
J 2 MEB B 1 204 1 MEB MEB . 
K 2 MEB B 1 205 1 MEB MEB . 
L 3 HOH A 1 301 1 HOH HOH . 
L 3 HOH A 2 302 3 HOH HOH . 
L 3 HOH A 3 303 4 HOH HOH . 
L 3 HOH A 4 304 7 HOH HOH . 
L 3 HOH A 5 305 8 HOH HOH . 
L 3 HOH A 6 306 12 HOH HOH . 
L 3 HOH A 7 307 13 HOH HOH . 
L 3 HOH A 8 308 14 HOH HOH . 
L 3 HOH A 9 309 15 HOH HOH . 
L 3 HOH A 10 310 16 HOH HOH . 
L 3 HOH A 11 311 17 HOH HOH . 
L 3 HOH A 12 312 21 HOH HOH . 
L 3 HOH A 13 313 22 HOH HOH . 
L 3 HOH A 14 314 27 HOH HOH . 
L 3 HOH A 15 315 29 HOH HOH . 
L 3 HOH A 16 316 31 HOH HOH . 
L 3 HOH A 17 317 32 HOH HOH . 
L 3 HOH A 18 318 34 HOH HOH . 
L 3 HOH A 19 319 35 HOH HOH . 
L 3 HOH A 20 320 36 HOH HOH . 
L 3 HOH A 21 321 40 HOH HOH . 
L 3 HOH A 22 322 42 HOH HOH . 
L 3 HOH A 23 323 43 HOH HOH . 
L 3 HOH A 24 324 47 HOH HOH . 
L 3 HOH A 25 325 49 HOH HOH . 
L 3 HOH A 26 326 50 HOH HOH . 
L 3 HOH A 27 327 52 HOH HOH . 
L 3 HOH A 28 328 53 HOH HOH . 
L 3 HOH A 29 329 54 HOH HOH . 
L 3 HOH A 30 330 56 HOH HOH . 
L 3 HOH A 31 331 59 HOH HOH . 
L 3 HOH A 32 332 61 HOH HOH . 
L 3 HOH A 33 333 62 HOH HOH . 
L 3 HOH A 34 334 67 HOH HOH . 
L 3 HOH A 35 335 68 HOH HOH . 
L 3 HOH A 36 336 70 HOH HOH . 
L 3 HOH A 37 337 74 HOH HOH . 
L 3 HOH A 38 338 75 HOH HOH . 
L 3 HOH A 39 339 78 HOH HOH . 
L 3 HOH A 40 340 79 HOH HOH . 
L 3 HOH A 41 341 81 HOH HOH . 
L 3 HOH A 42 342 83 HOH HOH . 
L 3 HOH A 43 343 91 HOH HOH . 
L 3 HOH A 44 344 92 HOH HOH . 
L 3 HOH A 45 345 93 HOH HOH . 
L 3 HOH A 46 346 94 HOH HOH . 
L 3 HOH A 47 347 95 HOH HOH . 
L 3 HOH A 48 348 96 HOH HOH . 
L 3 HOH A 49 349 97 HOH HOH . 
L 3 HOH A 50 350 98 HOH HOH . 
L 3 HOH A 51 351 99 HOH HOH . 
L 3 HOH A 52 352 102 HOH HOH . 
L 3 HOH A 53 353 105 HOH HOH . 
L 3 HOH A 54 354 106 HOH HOH . 
L 3 HOH A 55 355 107 HOH HOH . 
L 3 HOH A 56 356 111 HOH HOH . 
L 3 HOH A 57 357 112 HOH HOH . 
L 3 HOH A 58 358 113 HOH HOH . 
L 3 HOH A 59 359 114 HOH HOH . 
L 3 HOH A 60 360 119 HOH HOH . 
L 3 HOH A 61 361 120 HOH HOH . 
L 3 HOH A 62 362 121 HOH HOH . 
L 3 HOH A 63 363 122 HOH HOH . 
L 3 HOH A 64 364 123 HOH HOH . 
L 3 HOH A 65 365 124 HOH HOH . 
L 3 HOH A 66 366 125 HOH HOH . 
L 3 HOH A 67 367 132 HOH HOH . 
L 3 HOH A 68 368 135 HOH HOH . 
L 3 HOH A 69 369 136 HOH HOH . 
L 3 HOH A 70 370 137 HOH HOH . 
L 3 HOH A 71 371 142 HOH HOH . 
L 3 HOH A 72 372 143 HOH HOH . 
L 3 HOH A 73 373 144 HOH HOH . 
L 3 HOH A 74 374 147 HOH HOH . 
L 3 HOH A 75 375 148 HOH HOH . 
L 3 HOH A 76 376 151 HOH HOH . 
L 3 HOH A 77 377 155 HOH HOH . 
L 3 HOH A 78 378 157 HOH HOH . 
L 3 HOH A 79 379 160 HOH HOH . 
L 3 HOH A 80 380 162 HOH HOH . 
L 3 HOH A 81 381 166 HOH HOH . 
L 3 HOH A 82 382 167 HOH HOH . 
M 3 HOH B 1 301 2 HOH HOH . 
M 3 HOH B 2 302 5 HOH HOH . 
M 3 HOH B 3 303 6 HOH HOH . 
M 3 HOH B 4 304 9 HOH HOH . 
M 3 HOH B 5 305 10 HOH HOH . 
M 3 HOH B 6 306 18 HOH HOH . 
M 3 HOH B 7 307 19 HOH HOH . 
M 3 HOH B 8 308 20 HOH HOH . 
M 3 HOH B 9 309 24 HOH HOH . 
M 3 HOH B 10 310 25 HOH HOH . 
M 3 HOH B 11 311 26 HOH HOH . 
M 3 HOH B 12 312 28 HOH HOH . 
M 3 HOH B 13 313 30 HOH HOH . 
M 3 HOH B 14 314 33 HOH HOH . 
M 3 HOH B 15 315 37 HOH HOH . 
M 3 HOH B 16 316 38 HOH HOH . 
M 3 HOH B 17 317 39 HOH HOH . 
M 3 HOH B 18 318 41 HOH HOH . 
M 3 HOH B 19 319 44 HOH HOH . 
M 3 HOH B 20 320 45 HOH HOH . 
M 3 HOH B 21 321 46 HOH HOH . 
M 3 HOH B 22 322 48 HOH HOH . 
M 3 HOH B 23 323 51 HOH HOH . 
M 3 HOH B 24 324 55 HOH HOH . 
M 3 HOH B 25 325 57 HOH HOH . 
M 3 HOH B 26 326 58 HOH HOH . 
M 3 HOH B 27 327 60 HOH HOH . 
M 3 HOH B 28 328 63 HOH HOH . 
M 3 HOH B 29 329 64 HOH HOH . 
M 3 HOH B 30 330 65 HOH HOH . 
M 3 HOH B 31 331 66 HOH HOH . 
M 3 HOH B 32 332 69 HOH HOH . 
M 3 HOH B 33 333 71 HOH HOH . 
M 3 HOH B 34 334 72 HOH HOH . 
M 3 HOH B 35 335 73 HOH HOH . 
M 3 HOH B 36 336 76 HOH HOH . 
M 3 HOH B 37 337 77 HOH HOH . 
M 3 HOH B 38 338 80 HOH HOH . 
M 3 HOH B 39 339 82 HOH HOH . 
M 3 HOH B 40 340 84 HOH HOH . 
M 3 HOH B 41 341 85 HOH HOH . 
M 3 HOH B 42 342 86 HOH HOH . 
M 3 HOH B 43 343 87 HOH HOH . 
M 3 HOH B 44 344 88 HOH HOH . 
M 3 HOH B 45 345 89 HOH HOH . 
M 3 HOH B 46 346 90 HOH HOH . 
M 3 HOH B 47 347 100 HOH HOH . 
M 3 HOH B 48 348 101 HOH HOH . 
M 3 HOH B 49 349 103 HOH HOH . 
M 3 HOH B 50 350 104 HOH HOH . 
M 3 HOH B 51 351 108 HOH HOH . 
M 3 HOH B 52 352 109 HOH HOH . 
M 3 HOH B 53 353 110 HOH HOH . 
M 3 HOH B 54 354 115 HOH HOH . 
M 3 HOH B 55 355 116 HOH HOH . 
M 3 HOH B 56 356 117 HOH HOH . 
M 3 HOH B 57 357 118 HOH HOH . 
M 3 HOH B 58 358 126 HOH HOH . 
M 3 HOH B 59 359 127 HOH HOH . 
M 3 HOH B 60 360 128 HOH HOH . 
M 3 HOH B 61 361 129 HOH HOH . 
M 3 HOH B 62 362 130 HOH HOH . 
M 3 HOH B 63 363 131 HOH HOH . 
M 3 HOH B 64 364 133 HOH HOH . 
M 3 HOH B 65 365 134 HOH HOH . 
M 3 HOH B 66 366 138 HOH HOH . 
M 3 HOH B 67 367 139 HOH HOH . 
M 3 HOH B 68 368 140 HOH HOH . 
M 3 HOH B 69 369 141 HOH HOH . 
M 3 HOH B 70 370 145 HOH HOH . 
M 3 HOH B 71 371 146 HOH HOH . 
M 3 HOH B 72 372 149 HOH HOH . 
M 3 HOH B 73 373 150 HOH HOH . 
M 3 HOH B 74 374 152 HOH HOH . 
M 3 HOH B 75 375 153 HOH HOH . 
M 3 HOH B 76 376 154 HOH HOH . 
M 3 HOH B 77 377 156 HOH HOH . 
M 3 HOH B 78 378 158 HOH HOH . 
M 3 HOH B 79 379 159 HOH HOH . 
M 3 HOH B 80 380 161 HOH HOH . 
M 3 HOH B 81 381 163 HOH HOH . 
M 3 HOH B 82 382 164 HOH HOH . 
M 3 HOH B 83 383 165 HOH HOH . 
M 3 HOH B 84 384 168 HOH HOH . 
M 3 HOH B 85 385 169 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 MEB . . . H 2 -26.399 29.148 -9.2 1 17.6 ? C1 MEB 202 B 1 
HETATM 2 C C2 MEB . . . H 2 -26.618 28.21 -10.396 1 28.54 ? C2 MEB 202 B 1 
HETATM 3 C C3 MEB . . . H 2 -27.731 29.849 -8.794 1 25.76 ? C3 MEB 202 B 1 
HETATM 4 C C1' MEB . . . H 2 -25.888 28.36 -8.165 1 14.87 ? C1' MEB 202 B 1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           17 
_model_server_stats.create_model_time_ms    9 
_model_server_stats.query_time_ms           328 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           4 
#