data_4DD3
#
_model_server_result.job_id            p0rVqbLmzjLL31ln-v6AWg 
_model_server_result.datetime_utc      '2024-11-16 09:44:08' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4dd3 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":204}' 
#
_entry.id    4DD3 
#
_exptl.entry_id    4DD3 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              56.106 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            2-methylprop-1-ene 
_entity.pdbx_number_of_molecules    6 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            4DD3 
_cell.length_a            78.54 
_cell.length_b            78.54 
_cell.length_c            37.367 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4DD3 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        96 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 43 21 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 D N N 
? 3 E N N 
? 3 F N N 
? 3 G N N 
? 3 H N N 
? 3 K N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 6 A CYS 6 1_555 A SG CYS 127 A CYS 127 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.993 ? 
disulf ? disulf2 A SG CYS 30 A CYS 30 1_555 A SG CYS 115 A CYS 115 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.068 ? 
disulf ? disulf3 A SG CYS 64 A CYS 64 1_555 A SG CYS 80 A CYS 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.054 ? 
disulf ? disulf4 A SG CYS 76 A CYS 76 1_555 A SG CYS 94 A CYS 94 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.056 ? 
#
_chem_comp.formula           'C4 H8' 
_chem_comp.formula_weight    56.106 
_chem_comp.id                MEB 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              2-methylprop-1-ene 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 MEB doub 218 n n 
C1 C3 MEB sing 219 n n 
C1 C1' MEB sing 220 n n 
C2 H2 MEB sing 221 n n 
C2 H21 MEB sing 222 n n 
C3 H3 MEB sing 223 n n 
C3 H31 MEB sing 224 n n 
C3 H32 MEB sing 225 n n 
C1' "H1'1" MEB sing 226 n n 
C1' "H1'2" MEB sing 227 n n 
C1' "H1'3" MEB sing 228 n n 
#
_atom_sites.entry_id                     4DD3 
_atom_sites.fract_transf_matrix[1][1]    0.012732 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012732 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.026761 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 CL A 1 201 1 CL CL . 
C 2 CL A 1 202 1 CL CL . 
D 3 MEB A 1 203 1 MEB MEB . 
E 3 MEB A 1 204 1 MEB MEB . 
F 3 MEB A 1 205 1 MEB MEB . 
G 3 MEB A 1 206 1 MEB MEB . 
H 3 MEB A 1 207 1 MEB MEB . 
I 2 CL A 1 208 1 CL CL . 
J 2 CL A 1 209 1 CL CL . 
K 3 MEB A 1 210 1 MEB MEB . 
L 4 HOH A 1 301 1 HOH HOH . 
L 4 HOH A 2 302 3 HOH HOH . 
L 4 HOH A 3 303 4 HOH HOH . 
L 4 HOH A 4 304 6 HOH HOH . 
L 4 HOH A 5 305 7 HOH HOH . 
L 4 HOH A 6 306 8 HOH HOH . 
L 4 HOH A 7 307 9 HOH HOH . 
L 4 HOH A 8 308 10 HOH HOH . 
L 4 HOH A 9 309 11 HOH HOH . 
L 4 HOH A 10 310 12 HOH HOH . 
L 4 HOH A 11 311 13 HOH HOH . 
L 4 HOH A 12 312 14 HOH HOH . 
L 4 HOH A 13 313 15 HOH HOH . 
L 4 HOH A 14 314 16 HOH HOH . 
L 4 HOH A 15 315 17 HOH HOH . 
L 4 HOH A 16 316 18 HOH HOH . 
L 4 HOH A 17 317 19 HOH HOH . 
L 4 HOH A 18 318 20 HOH HOH . 
L 4 HOH A 19 319 21 HOH HOH . 
L 4 HOH A 20 320 22 HOH HOH . 
L 4 HOH A 21 321 23 HOH HOH . 
L 4 HOH A 22 322 24 HOH HOH . 
L 4 HOH A 23 323 25 HOH HOH . 
L 4 HOH A 24 324 26 HOH HOH . 
L 4 HOH A 25 325 27 HOH HOH . 
L 4 HOH A 26 326 28 HOH HOH . 
L 4 HOH A 27 327 29 HOH HOH . 
L 4 HOH A 28 328 30 HOH HOH . 
L 4 HOH A 29 329 31 HOH HOH . 
L 4 HOH A 30 330 32 HOH HOH . 
L 4 HOH A 31 331 33 HOH HOH . 
L 4 HOH A 32 332 34 HOH HOH . 
L 4 HOH A 33 333 35 HOH HOH . 
L 4 HOH A 34 334 36 HOH HOH . 
L 4 HOH A 35 335 37 HOH HOH . 
L 4 HOH A 36 336 38 HOH HOH . 
L 4 HOH A 37 337 39 HOH HOH . 
L 4 HOH A 38 338 40 HOH HOH . 
L 4 HOH A 39 339 41 HOH HOH . 
L 4 HOH A 40 340 42 HOH HOH . 
L 4 HOH A 41 341 43 HOH HOH . 
L 4 HOH A 42 342 44 HOH HOH . 
L 4 HOH A 43 343 45 HOH HOH . 
L 4 HOH A 44 344 46 HOH HOH . 
L 4 HOH A 45 345 47 HOH HOH . 
L 4 HOH A 46 346 48 HOH HOH . 
L 4 HOH A 47 347 49 HOH HOH . 
L 4 HOH A 48 348 50 HOH HOH . 
L 4 HOH A 49 349 51 HOH HOH . 
L 4 HOH A 50 350 52 HOH HOH . 
L 4 HOH A 51 351 53 HOH HOH . 
L 4 HOH A 52 352 54 HOH HOH . 
L 4 HOH A 53 353 55 HOH HOH . 
L 4 HOH A 54 354 56 HOH HOH . 
L 4 HOH A 55 355 57 HOH HOH . 
L 4 HOH A 56 356 58 HOH HOH . 
L 4 HOH A 57 357 59 HOH HOH . 
L 4 HOH A 58 358 60 HOH HOH . 
L 4 HOH A 59 359 61 HOH HOH . 
L 4 HOH A 60 360 62 HOH HOH . 
L 4 HOH A 61 361 63 HOH HOH . 
L 4 HOH A 62 362 64 HOH HOH . 
L 4 HOH A 63 363 65 HOH HOH . 
L 4 HOH A 64 364 66 HOH HOH . 
L 4 HOH A 65 365 68 HOH HOH . 
L 4 HOH A 66 366 69 HOH HOH . 
L 4 HOH A 67 367 70 HOH HOH . 
L 4 HOH A 68 368 71 HOH HOH . 
L 4 HOH A 69 369 72 HOH HOH . 
L 4 HOH A 70 370 73 HOH HOH . 
L 4 HOH A 71 371 74 HOH HOH . 
L 4 HOH A 72 372 75 HOH HOH . 
L 4 HOH A 73 373 76 HOH HOH . 
L 4 HOH A 74 374 78 HOH HOH . 
L 4 HOH A 75 375 80 HOH HOH . 
L 4 HOH A 76 376 81 HOH HOH . 
L 4 HOH A 77 377 82 HOH HOH . 
L 4 HOH A 78 378 83 HOH HOH . 
L 4 HOH A 79 379 84 HOH HOH . 
L 4 HOH A 80 380 85 HOH HOH . 
L 4 HOH A 81 381 86 HOH HOH . 
L 4 HOH A 82 382 87 HOH HOH . 
L 4 HOH A 83 383 88 HOH HOH . 
L 4 HOH A 84 384 89 HOH HOH . 
L 4 HOH A 85 385 90 HOH HOH . 
L 4 HOH A 86 386 1 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 MEB . . . E 3 -19.133 -11.857 -27.132 1 31.62 ? C1 MEB 204 A 1 
HETATM 2 C C2 MEB . . . E 3 -19.895 -13.116 -27.566 1 37.89 ? C2 MEB 204 A 1 
HETATM 3 C C3 MEB . . . E 3 -19.905 -10.59 -27.54 1 39.64 ? C3 MEB 204 A 1 
HETATM 4 C C1' MEB . . . E 3 -18.756 -11.903 -25.668 1 34.51 ? C1' MEB 204 A 1 
#
_model_server_stats.io_time_ms              6 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    23 
_model_server_stats.query_time_ms           314 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           4 
#