data_4DF7
#
_model_server_result.job_id            Fz3YNfdPXYLCeoqZCh6EyQ 
_model_server_result.datetime_utc      '2024-10-11 10:16:20' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4df7 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":201}' 
#
_entry.id    4DF7 
#
_exptl.entry_id    4DF7 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              40.078 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'CALCIUM ION' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          93.71 
_cell.angle_gamma         90 
_cell.entry_id            4DF7 
_cell.length_a            31.041 
_cell.length_b            60.664 
_cell.length_c            38.239 
_cell.Z_PDB               2 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4DF7 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OD2 ASP 21 A ASP 21 1_555 B CA CA . A CA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.908 ? 
metalc ? metalc2 A OD1 ASP 40 A ASP 40 1_555 B CA CA . A CA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.698 ? 
metalc ? metalc3 A O THR 41 A THR 41 1_555 B CA CA . A CA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.771 ? 
metalc ? metalc4 A OE2 GLU 43 A GLU 43 1_555 B CA CA . A CA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.148 ? 
metalc ? metalc5 B CA CA . A CA 201 1_555 D O HOH . A HOH 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.756 ? 
metalc ? metalc6 B CA CA . A CA 201 1_555 D O HOH . A HOH 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.972 ? 
#
_chem_comp.formula           'Ca 2' 
_chem_comp.formula_weight    40.078 
_chem_comp.id                CA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'CALCIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     4DF7 
_atom_sites.fract_transf_matrix[1][1]    0.032215 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.002087 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.016484 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.026206 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 CA A 1 201 1 CA CA . 
C 3 THP A 1 202 1 THP THP . 
D 4 HOH A 1 301 1 HOH HOH . 
D 4 HOH A 2 302 2 HOH HOH . 
D 4 HOH A 3 303 3 HOH HOH . 
D 4 HOH A 4 304 4 HOH HOH . 
D 4 HOH A 5 305 5 HOH HOH . 
D 4 HOH A 6 306 6 HOH HOH . 
D 4 HOH A 7 307 7 HOH HOH . 
D 4 HOH A 8 308 8 HOH HOH . 
D 4 HOH A 9 309 9 HOH HOH . 
D 4 HOH A 10 310 10 HOH HOH . 
D 4 HOH A 11 311 11 HOH HOH . 
D 4 HOH A 12 312 12 HOH HOH . 
D 4 HOH A 13 313 13 HOH HOH . 
D 4 HOH A 14 314 14 HOH HOH . 
D 4 HOH A 15 315 15 HOH HOH . 
D 4 HOH A 16 316 16 HOH HOH . 
D 4 HOH A 17 317 17 HOH HOH . 
D 4 HOH A 18 318 18 HOH HOH . 
D 4 HOH A 19 319 19 HOH HOH . 
D 4 HOH A 20 320 20 HOH HOH . 
D 4 HOH A 21 321 21 HOH HOH . 
D 4 HOH A 22 322 22 HOH HOH . 
D 4 HOH A 23 323 23 HOH HOH . 
D 4 HOH A 24 324 24 HOH HOH . 
D 4 HOH A 25 325 25 HOH HOH . 
D 4 HOH A 26 326 26 HOH HOH . 
D 4 HOH A 27 327 27 HOH HOH . 
D 4 HOH A 28 328 28 HOH HOH . 
D 4 HOH A 29 329 29 HOH HOH . 
D 4 HOH A 30 330 30 HOH HOH . 
D 4 HOH A 31 331 31 HOH HOH . 
D 4 HOH A 32 332 32 HOH HOH . 
D 4 HOH A 33 333 33 HOH HOH . 
D 4 HOH A 34 334 34 HOH HOH . 
D 4 HOH A 35 335 36 HOH HOH . 
D 4 HOH A 36 336 37 HOH HOH . 
D 4 HOH A 37 337 38 HOH HOH . 
D 4 HOH A 38 338 39 HOH HOH . 
D 4 HOH A 39 339 40 HOH HOH . 
D 4 HOH A 40 340 41 HOH HOH . 
D 4 HOH A 41 341 42 HOH HOH . 
D 4 HOH A 42 342 43 HOH HOH . 
D 4 HOH A 43 343 44 HOH HOH . 
D 4 HOH A 44 344 46 HOH HOH . 
D 4 HOH A 45 345 47 HOH HOH . 
D 4 HOH A 46 346 48 HOH HOH . 
D 4 HOH A 47 347 49 HOH HOH . 
D 4 HOH A 48 348 50 HOH HOH . 
D 4 HOH A 49 349 51 HOH HOH . 
D 4 HOH A 50 350 52 HOH HOH . 
D 4 HOH A 51 351 53 HOH HOH . 
D 4 HOH A 52 352 54 HOH HOH . 
D 4 HOH A 53 353 55 HOH HOH . 
D 4 HOH A 54 354 56 HOH HOH . 
D 4 HOH A 55 355 57 HOH HOH . 
D 4 HOH A 56 356 59 HOH HOH . 
D 4 HOH A 57 357 60 HOH HOH . 
D 4 HOH A 58 358 61 HOH HOH . 
D 4 HOH A 59 359 62 HOH HOH . 
D 4 HOH A 60 360 63 HOH HOH . 
D 4 HOH A 61 361 66 HOH HOH . 
D 4 HOH A 62 362 70 HOH HOH . 
D 4 HOH A 63 363 71 HOH HOH . 
D 4 HOH A 64 364 89 HOH HOH . 
D 4 HOH A 65 365 90 HOH HOH . 
D 4 HOH A 66 366 92 HOH HOH . 
D 4 HOH A 67 367 93 HOH HOH . 
D 4 HOH A 68 368 94 HOH HOH . 
D 4 HOH A 69 369 95 HOH HOH . 
D 4 HOH A 70 370 96 HOH HOH . 
D 4 HOH A 71 371 97 HOH HOH . 
D 4 HOH A 72 372 98 HOH HOH . 
D 4 HOH A 73 373 99 HOH HOH . 
D 4 HOH A 74 374 100 HOH HOH . 
D 4 HOH A 75 375 102 HOH HOH . 
D 4 HOH A 76 376 103 HOH HOH . 
D 4 HOH A 77 377 104 HOH HOH . 
D 4 HOH A 78 378 105 HOH HOH . 
D 4 HOH A 79 379 106 HOH HOH . 
D 4 HOH A 80 380 107 HOH HOH . 
D 4 HOH A 81 381 108 HOH HOH . 
D 4 HOH A 82 382 109 HOH HOH . 
D 4 HOH A 83 383 110 HOH HOH . 
D 4 HOH A 84 384 111 HOH HOH . 
D 4 HOH A 85 385 112 HOH HOH . 
D 4 HOH A 86 386 113 HOH HOH . 
D 4 HOH A 87 387 114 HOH HOH . 
D 4 HOH A 88 388 115 HOH HOH . 
D 4 HOH A 89 389 116 HOH HOH . 
D 4 HOH A 90 390 118 HOH HOH . 
D 4 HOH A 91 391 119 HOH HOH . 
D 4 HOH A 92 392 120 HOH HOH . 
D 4 HOH A 93 393 121 HOH HOH . 
D 4 HOH A 94 394 122 HOH HOH . 
D 4 HOH A 95 395 123 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           CA 
_atom_site.label_atom_id         CA 
_atom_site.label_comp_id         CA 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         B 
_atom_site.label_entity_id       2 
_atom_site.Cartn_x               15.672 
_atom_site.Cartn_y               11.259 
_atom_site.Cartn_z               8.221 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        25.25 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          CA 
_atom_site.auth_comp_id          CA 
_atom_site.auth_seq_id           201 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              57 
_model_server_stats.parse_time_ms           18 
_model_server_stats.create_model_time_ms    6 
_model_server_stats.query_time_ms           312 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           1 
#