data_4DFF # _model_server_result.job_id jduEWPEpPX8sMj_GWMf90g _model_server_result.datetime_utc '2024-11-05 04:54:17' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4dff # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":801}' # _entry.id 4DFF # _exptl.entry_id 4DFF _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4DFF _cell.length_a 48.654 _cell.length_b 81.177 _cell.length_c 153.323 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4DFF _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,H 1 1 B,E,F,G,I 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 61 A CYS 498 1_555 A SG CYS 65 A CYS 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.848 ? metalc ? metalc1 A NE2 HIS 92 A HIS 529 1_555 D ZN ZN . A ZN 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.153 ? metalc ? metalc2 A NE2 HIS 126 A HIS 563 1_555 D ZN ZN . A ZN 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.068 ? metalc ? metalc3 A OD1 ASP 127 A ASP 564 1_555 C MG MG . A MG 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.945 ? metalc ? metalc4 A OD2 ASP 127 A ASP 564 1_555 D ZN ZN . A ZN 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.019 ? metalc ? metalc5 A OD1 ASP 237 A ASP 674 1_555 D ZN ZN . A ZN 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.96 ? metalc ? metalc6 C MG MG . A MG 801 1_555 H O HOH . A HOH 909 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.934 ? metalc ? metalc7 C MG MG . A MG 801 1_555 H O HOH . A HOH 921 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.87 ? metalc ? metalc8 C MG MG . A MG 801 1_555 H O HOH . A HOH 922 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.14 ? metalc ? metalc9 C MG MG . A MG 801 1_555 H O HOH . A HOH 924 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.321 ? metalc ? metalc10 C MG MG . A MG 801 1_555 H O HOH . A HOH 927 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.2 ? metalc ? metalc11 D ZN ZN . A ZN 802 1_555 H O HOH . A HOH 921 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.375 ? metalc ? metalc12 B NE2 HIS 92 B HIS 529 1_555 G ZN ZN . B ZN 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.154 ? metalc ? metalc13 B NE2 HIS 126 B HIS 563 1_555 G ZN ZN . B ZN 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.071 ? metalc ? metalc14 B OD1 ASP 127 B ASP 564 1_555 F MG MG . B MG 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.904 ? metalc ? metalc15 B OD2 ASP 127 B ASP 564 1_555 G ZN ZN . B ZN 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.249 ? metalc ? metalc16 B OD1 ASP 237 B ASP 674 1_555 G ZN ZN . B ZN 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.315 ? metalc ? metalc17 F MG MG . B MG 802 1_555 I O HOH . B HOH 905 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.963 ? metalc ? metalc18 F MG MG . B MG 802 1_555 I O HOH . B HOH 914 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.195 ? metalc ? metalc19 F MG MG . B MG 802 1_555 I O HOH . B HOH 916 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.13 ? metalc ? metalc20 F MG MG . B MG 802 1_555 I O HOH . B HOH 917 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.007 ? metalc ? metalc21 F MG MG . B MG 802 1_555 I O HOH . B HOH 921 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.294 ? metalc ? metalc22 G ZN ZN . B ZN 803 1_555 I O HOH . B HOH 911 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.097 ? metalc ? metalc23 G ZN ZN . B ZN 803 1_555 I O HOH . B HOH 914 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.887 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4DFF _atom_sites.fract_transf_matrix[1][1] 0.020553 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012319 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006522 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MG A 1 801 501 MG MG . D 3 ZN A 1 802 502 ZN ZN . E 4 0JP B 1 801 1 0JP 0JP . F 2 MG B 1 802 501 MG MG . G 3 ZN B 1 803 502 ZN ZN . H 5 HOH A 1 901 6 HOH HOH . H 5 HOH A 2 902 7 HOH HOH . H 5 HOH A 3 903 8 HOH HOH . H 5 HOH A 4 904 9 HOH HOH . H 5 HOH A 5 905 11 HOH HOH . H 5 HOH A 6 906 15 HOH HOH . H 5 HOH A 7 907 20 HOH HOH . H 5 HOH A 8 908 27 HOH HOH . H 5 HOH A 9 909 28 HOH HOH . H 5 HOH A 10 910 36 HOH HOH . H 5 HOH A 11 911 47 HOH HOH . H 5 HOH A 12 912 58 HOH HOH . H 5 HOH A 13 913 61 HOH HOH . H 5 HOH A 14 914 86 HOH HOH . H 5 HOH A 15 915 131 HOH HOH . H 5 HOH A 16 916 140 HOH HOH . H 5 HOH A 17 917 157 HOH HOH . H 5 HOH A 18 918 170 HOH HOH . H 5 HOH A 19 919 231 HOH HOH . H 5 HOH A 20 920 236 HOH HOH . H 5 HOH A 21 921 237 HOH HOH . H 5 HOH A 22 922 260 HOH HOH . H 5 HOH A 23 923 266 HOH HOH . H 5 HOH A 24 924 279 HOH HOH . H 5 HOH A 25 925 285 HOH HOH . H 5 HOH A 26 926 299 HOH HOH . H 5 HOH A 27 927 302 HOH HOH . H 5 HOH A 28 928 305 HOH HOH . H 5 HOH A 29 929 306 HOH HOH . H 5 HOH A 30 930 311 HOH HOH . H 5 HOH A 31 931 312 HOH HOH . H 5 HOH A 32 932 313 HOH HOH . I 5 HOH B 1 901 3 HOH HOH . I 5 HOH B 2 902 4 HOH HOH . I 5 HOH B 3 903 17 HOH HOH . I 5 HOH B 4 904 29 HOH HOH . I 5 HOH B 5 905 30 HOH HOH . I 5 HOH B 6 906 55 HOH HOH . I 5 HOH B 7 907 62 HOH HOH . I 5 HOH B 8 908 94 HOH HOH . I 5 HOH B 9 909 120 HOH HOH . I 5 HOH B 10 910 127 HOH HOH . I 5 HOH B 11 911 144 HOH HOH . I 5 HOH B 12 912 161 HOH HOH . I 5 HOH B 13 913 281 HOH HOH . I 5 HOH B 14 914 283 HOH HOH . I 5 HOH B 15 915 301 HOH HOH . I 5 HOH B 16 916 303 HOH HOH . I 5 HOH B 17 917 304 HOH HOH . I 5 HOH B 18 918 307 HOH HOH . I 5 HOH B 19 919 308 HOH HOH . I 5 HOH B 20 920 309 HOH HOH . I 5 HOH B 21 921 314 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 2 _atom_site.Cartn_x 10.98 _atom_site.Cartn_y 5.826 _atom_site.Cartn_z 45.574 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 39 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 801 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 21 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 281 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #