data_4DFF # _model_server_result.job_id PYtmB8KynhnHkXuX_kPPmg _model_server_result.datetime_utc '2024-11-26 05:58:05' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4dff # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":801}' # _entry.id 4DFF # _exptl.entry_id 4DFF _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 313.374 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 8,9-dimethoxy-1-(1,3-thiazol-5-yl)-5,6-dihydroimidazo[5,1-a]isoquinoline _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4DFF _cell.length_a 48.654 _cell.length_b 81.177 _cell.length_c 153.323 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4DFF _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,H 1 1 B,E,F,G,I 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 61 A CYS 498 1_555 A SG CYS 65 A CYS 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.848 ? metalc ? metalc1 A NE2 HIS 92 A HIS 529 1_555 D ZN ZN . A ZN 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.153 ? metalc ? metalc2 A NE2 HIS 126 A HIS 563 1_555 D ZN ZN . A ZN 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.068 ? metalc ? metalc3 A OD1 ASP 127 A ASP 564 1_555 C MG MG . A MG 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.945 ? metalc ? metalc4 A OD2 ASP 127 A ASP 564 1_555 D ZN ZN . A ZN 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.019 ? metalc ? metalc5 A OD1 ASP 237 A ASP 674 1_555 D ZN ZN . A ZN 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.96 ? metalc ? metalc6 C MG MG . A MG 801 1_555 H O HOH . A HOH 909 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.934 ? metalc ? metalc7 C MG MG . A MG 801 1_555 H O HOH . A HOH 921 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.87 ? metalc ? metalc8 C MG MG . A MG 801 1_555 H O HOH . A HOH 922 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.14 ? metalc ? metalc9 C MG MG . A MG 801 1_555 H O HOH . A HOH 924 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.321 ? metalc ? metalc10 C MG MG . A MG 801 1_555 H O HOH . A HOH 927 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.2 ? metalc ? metalc11 D ZN ZN . A ZN 802 1_555 H O HOH . A HOH 921 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.375 ? metalc ? metalc12 B NE2 HIS 92 B HIS 529 1_555 G ZN ZN . B ZN 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.154 ? metalc ? metalc13 B NE2 HIS 126 B HIS 563 1_555 G ZN ZN . B ZN 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.071 ? metalc ? metalc14 B OD1 ASP 127 B ASP 564 1_555 F MG MG . B MG 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.904 ? metalc ? metalc15 B OD2 ASP 127 B ASP 564 1_555 G ZN ZN . B ZN 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.249 ? metalc ? metalc16 B OD1 ASP 237 B ASP 674 1_555 G ZN ZN . B ZN 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.315 ? metalc ? metalc17 F MG MG . B MG 802 1_555 I O HOH . B HOH 905 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.963 ? metalc ? metalc18 F MG MG . B MG 802 1_555 I O HOH . B HOH 914 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.195 ? metalc ? metalc19 F MG MG . B MG 802 1_555 I O HOH . B HOH 916 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.13 ? metalc ? metalc20 F MG MG . B MG 802 1_555 I O HOH . B HOH 917 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.007 ? metalc ? metalc21 F MG MG . B MG 802 1_555 I O HOH . B HOH 921 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.294 ? metalc ? metalc22 G ZN ZN . B ZN 803 1_555 I O HOH . B HOH 911 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.097 ? metalc ? metalc23 G ZN ZN . B ZN 803 1_555 I O HOH . B HOH 914 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.887 ? # _chem_comp.formula 'C16 H15 N3 O2 S' _chem_comp.formula_weight 313.374 _chem_comp.id 0JP _chem_comp.mon_nstd_flag . _chem_comp.name 8,9-dimethoxy-1-(1,3-thiazol-5-yl)-5,6-dihydroimidazo[5,1-a]isoquinoline _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C13 S14 0JP sing 1 n y C13 N12 0JP doub 2 n y S14 C10 0JP sing 3 n y N12 C11 0JP sing 4 n y C10 C11 0JP doub 5 n y C10 C9 0JP sing 6 n n N8 C9 0JP sing 7 n y N8 C7 0JP doub 8 n y C9 C15 0JP doub 9 n y C7 N6 0JP sing 10 n y C15 N6 0JP sing 11 n y C15 C16 0JP sing 12 n n C22 O19 0JP sing 13 n n N6 C5 0JP sing 14 n n C17 C16 0JP doub 15 n y C17 C18 0JP sing 16 n y C16 C3 0JP sing 17 n y O19 C18 0JP sing 18 n n C18 C1 0JP doub 19 n y C5 C4 0JP sing 20 n n C3 C4 0JP sing 21 n n C3 C2 0JP doub 22 n y C1 C2 0JP sing 23 n y C1 O20 0JP sing 24 n n O20 C21 0JP sing 25 n n C17 H17 0JP sing 26 n n C2 H2 0JP sing 27 n n C11 H11 0JP sing 28 n n C7 H7 0JP sing 29 n n C13 H13 0JP sing 30 n n C4 H42 0JP sing 31 n n C4 H41 0JP sing 32 n n C5 H52 0JP sing 33 n n C5 H51 0JP sing 34 n n C22 H223 0JP sing 35 n n C22 H221 0JP sing 36 n n C22 H222 0JP sing 37 n n C21 H213 0JP sing 38 n n C21 H212 0JP sing 39 n n C21 H211 0JP sing 40 n n # _atom_sites.entry_id 4DFF _atom_sites.fract_transf_matrix[1][1] 0.020553 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012319 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006522 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MG A 1 801 501 MG MG . D 3 ZN A 1 802 502 ZN ZN . E 4 0JP B 1 801 1 0JP 0JP . F 2 MG B 1 802 501 MG MG . G 3 ZN B 1 803 502 ZN ZN . H 5 HOH A 1 901 6 HOH HOH . H 5 HOH A 2 902 7 HOH HOH . H 5 HOH A 3 903 8 HOH HOH . H 5 HOH A 4 904 9 HOH HOH . H 5 HOH A 5 905 11 HOH HOH . H 5 HOH A 6 906 15 HOH HOH . H 5 HOH A 7 907 20 HOH HOH . H 5 HOH A 8 908 27 HOH HOH . H 5 HOH A 9 909 28 HOH HOH . H 5 HOH A 10 910 36 HOH HOH . H 5 HOH A 11 911 47 HOH HOH . H 5 HOH A 12 912 58 HOH HOH . H 5 HOH A 13 913 61 HOH HOH . H 5 HOH A 14 914 86 HOH HOH . H 5 HOH A 15 915 131 HOH HOH . H 5 HOH A 16 916 140 HOH HOH . H 5 HOH A 17 917 157 HOH HOH . H 5 HOH A 18 918 170 HOH HOH . H 5 HOH A 19 919 231 HOH HOH . H 5 HOH A 20 920 236 HOH HOH . H 5 HOH A 21 921 237 HOH HOH . H 5 HOH A 22 922 260 HOH HOH . H 5 HOH A 23 923 266 HOH HOH . H 5 HOH A 24 924 279 HOH HOH . H 5 HOH A 25 925 285 HOH HOH . H 5 HOH A 26 926 299 HOH HOH . H 5 HOH A 27 927 302 HOH HOH . H 5 HOH A 28 928 305 HOH HOH . H 5 HOH A 29 929 306 HOH HOH . H 5 HOH A 30 930 311 HOH HOH . H 5 HOH A 31 931 312 HOH HOH . H 5 HOH A 32 932 313 HOH HOH . I 5 HOH B 1 901 3 HOH HOH . I 5 HOH B 2 902 4 HOH HOH . I 5 HOH B 3 903 17 HOH HOH . I 5 HOH B 4 904 29 HOH HOH . I 5 HOH B 5 905 30 HOH HOH . I 5 HOH B 6 906 55 HOH HOH . I 5 HOH B 7 907 62 HOH HOH . I 5 HOH B 8 908 94 HOH HOH . I 5 HOH B 9 909 120 HOH HOH . I 5 HOH B 10 910 127 HOH HOH . I 5 HOH B 11 911 144 HOH HOH . I 5 HOH B 12 912 161 HOH HOH . I 5 HOH B 13 913 281 HOH HOH . I 5 HOH B 14 914 283 HOH HOH . I 5 HOH B 15 915 301 HOH HOH . I 5 HOH B 16 916 303 HOH HOH . I 5 HOH B 17 917 304 HOH HOH . I 5 HOH B 18 918 307 HOH HOH . I 5 HOH B 19 919 308 HOH HOH . I 5 HOH B 20 920 309 HOH HOH . I 5 HOH B 21 921 314 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C17 0JP . . . E 4 7.661 38.334 56.997 1 60.98 ? C17 0JP 801 B 1 HETATM 2 C C2 0JP . . . E 4 8.575 38.472 59.652 1 61.24 ? C2 0JP 801 B 1 HETATM 3 C C11 0JP . . . E 4 9.086 37.661 53.935 1 80.68 ? C11 0JP 801 B 1 HETATM 4 C C7 0JP . . . E 4 10.944 41.491 55.705 1 75.73 ? C7 0JP 801 B 1 HETATM 5 C C13 0JP . . . E 4 8.825 37.876 51.752 1 85.51 ? C13 0JP 801 B 1 HETATM 6 C C16 0JP . . . E 4 8.813 39.078 57.308 1 65.18 ? C16 0JP 801 B 1 HETATM 7 C C3 0JP . . . E 4 9.265 39.138 58.657 1 64.32 ? C3 0JP 801 B 1 HETATM 8 C C18 0JP . . . E 4 6.928 37.68 57.997 1 58.14 ? C18 0JP 801 B 1 HETATM 9 C C1 0JP . . . E 4 7.387 37.736 59.326 1 57.57 ? C1 0JP 801 B 1 HETATM 10 C C9 0JP . . . E 4 9.82 39.873 54.918 1 76.28 ? C9 0JP 801 B 1 HETATM 11 C C15 0JP . . . E 4 9.57 39.829 56.297 1 71.49 ? C15 0JP 801 B 1 HETATM 12 C C10 0JP . . . E 4 9.402 38.992 53.824 1 80.5 ? C10 0JP 801 B 1 HETATM 13 C C4 0JP . . . E 4 10.467 39.981 59.002 1 70.13 ? C4 0JP 801 B 1 HETATM 14 C C5 0JP . . . E 4 10.341 41.274 58.186 1 72.85 ? C5 0JP 801 B 1 HETATM 15 C C22 0JP . . . E 4 5.143 36.783 56.54 1 57.81 ? C22 0JP 801 B 1 HETATM 16 C C21 0JP . . . E 4 6.764 36.999 61.596 1 55.09 ? C21 0JP 801 B 1 HETATM 17 N N12 0JP . . . E 4 8.741 36.994 52.765 1 83.59 ? N12 0JP 801 B 1 HETATM 18 N N8 0JP . . . E 4 10.692 40.891 54.59 1 75.96 ? N8 0JP 801 B 1 HETATM 19 N N6 0JP . . . E 4 10.305 40.894 56.758 1 73.89 ? N6 0JP 801 B 1 HETATM 20 O O19 0JP . . . E 4 5.796 36.89 57.812 1 59.51 ? O19 0JP 801 B 1 HETATM 21 O O20 0JP . . . E 4 6.622 36.973 60.166 1 55.99 ? O20 0JP 801 B 1 HETATM 22 S S14 0JP . . . E 4 9.329 39.486 52.166 1 84.99 ? S14 0JP 801 B 1 HETATM 23 H H17 0JP . . . E 4 7.352 38.303 56.003 1 59.97 ? H17 0JP 801 B 1 HETATM 24 H H2 0JP . . . E 4 8.953 38.551 60.665 1 60.91 ? H2 0JP 801 B 1 HETATM 25 H H11 0JP . . . E 4 9.057 37.12 54.846 1 80.47 ? H11 0JP 801 B 1 HETATM 26 H H7 0JP . . . E 4 11.587 42.356 55.81 1 75.96 ? H7 0JP 801 B 1 HETATM 27 H H13 0JP . . . E 4 8.608 37.606 50.725 1 85.4 ? H13 0JP 801 B 1 HETATM 28 H H42 0JP . . . E 4 10.522 40.223 60.073 1 70.2 ? H42 0JP 801 B 1 HETATM 29 H H41 0JP . . . E 4 11.374 39.448 58.704 1 70.69 ? H41 0JP 801 B 1 HETATM 30 H H52 0JP . . . E 4 9.395 41.796 58.4 1 72.89 ? H52 0JP 801 B 1 HETATM 31 H H51 0JP . . . E 4 11.182 41.953 58.388 1 73.37 ? H51 0JP 801 B 1 HETATM 32 H H223 0JP . . . E 4 4.59 37.705 56.436 1 58 ? H223 0JP 801 B 1 HETATM 33 H H221 0JP . . . E 4 4.405 35.976 56.552 1 57.84 ? H221 0JP 801 B 1 HETATM 34 H H222 0JP . . . E 4 5.817 36.641 55.699 1 56.51 ? H222 0JP 801 B 1 HETATM 35 H H213 0JP . . . E 4 7.807 36.911 61.914 1 55.02 ? H213 0JP 801 B 1 HETATM 36 H H212 0JP . . . E 4 6.224 36.138 62.013 1 54.35 ? H212 0JP 801 B 1 HETATM 37 H H211 0JP . . . E 4 6.3 37.9 61.986 1 54.85 ? H211 0JP 801 B 1 # _model_server_stats.io_time_ms 19 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 261 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 37 #