data_4DGF
#
_model_server_result.job_id            Fwl9srewaxlHhbMLakG0Vw 
_model_server_result.datetime_utc      '2024-10-28 02:28:59' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4dgf 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":602}' 
#
_entry.id    4DGF 
#
_exptl.entry_id    4DGF 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              46.025 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'FORMIC ACID' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            4DGF 
_cell.length_a            37.71 
_cell.length_b            71.865 
_cell.length_c            105.57 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4DGF 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        18 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 2 21 21' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 author_and_software_defined_assembly 1 
PISA monomeric 1 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,G 1 1 
B,E,F,H 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 D N N 
? 3 F N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A C ARG 58 A ARG 488 1_555 A N MSE 59 A MSE 489 1_555 ? ? ? ? A ? ? ? ? ? ? ? 1.325 ? 
covale ? covale2 A C ARG 58 A ARG 488 1_555 A N MSE 59 A MSE 489 1_555 ? ? ? ? B ? ? ? ? ? ? ? 1.333 ? 
covale ? covale3 A C MSE 59 A MSE 489 1_555 A N ARG 60 A ARG 490 1_555 ? A ? ? ? ? ? ? ? ? ? ? 1.331 ? 
covale ? covale4 A C MSE 59 A MSE 489 1_555 A N ARG 60 A ARG 490 1_555 ? B ? ? ? ? ? ? ? ? ? ? 1.326 ? 
covale ? covale5 A C GLY 69 A GLY 499 1_555 A N MSE 70 A MSE 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.354 ? 
covale ? covale6 A C MSE 70 A MSE 500 1_555 A N HIS 71 A HIS 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.339 ? 
covale ? covale7 B C GLY 8 B GLY 438 1_555 B N MSE 9 B MSE 439 1_555 ? ? ? ? A ? ? ? ? ? ? ? 1.33 ? 
covale ? covale8 B C GLY 8 B GLY 438 1_555 B N MSE 9 B MSE 439 1_555 ? ? ? ? B ? ? ? ? ? ? ? 1.331 ? 
covale ? covale9 B C MSE 9 B MSE 439 1_555 B N ASP 10 B ASP 440 1_555 ? A ? ? ? ? ? ? ? ? ? ? 1.342 ? 
covale ? covale10 B C MSE 9 B MSE 439 1_555 B N ASP 10 B ASP 440 1_555 ? B ? ? ? ? ? ? ? ? ? ? 1.342 ? 
covale ? covale11 B C ARG 58 B ARG 488 1_555 B N MSE 59 B MSE 489 1_555 ? ? ? ? A ? ? ? ? ? ? ? 1.328 ? 
covale ? covale12 B C ARG 58 B ARG 488 1_555 B N MSE 59 B MSE 489 1_555 ? ? ? ? B ? ? ? ? ? ? ? 1.339 ? 
covale ? covale13 B C MSE 59 B MSE 489 1_555 B N ARG 60 B ARG 490 1_555 ? A ? ? ? ? ? ? ? ? ? ? 1.33 ? 
covale ? covale14 B C MSE 59 B MSE 489 1_555 B N ARG 60 B ARG 490 1_555 ? B ? ? ? ? ? ? ? ? ? ? 1.326 ? 
covale ? covale15 B C GLY 69 B GLY 499 1_555 B N MSE 70 B MSE 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.342 ? 
covale ? covale16 B C MSE 70 B MSE 500 1_555 B N HIS 71 B HIS 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.352 ? 
#
_chem_comp.formula           'C H2 O2' 
_chem_comp.formula_weight    46.025 
_chem_comp.id                FMT 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'FORMIC ACID' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     4DGF 
_atom_sites.fract_transf_matrix[1][1]    0.026518 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.013915 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009472 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 CL A 1 601 601 CL CL . 
D 3 FMT A 1 602 701 FMT FMT . 
E 2 CL B 1 601 601 CL CL . 
F 3 FMT B 1 602 701 FMT FMT . 
G 4 HOH A 1 701 1 HOH HOH . 
G 4 HOH A 2 702 2 HOH HOH . 
G 4 HOH A 3 703 3 HOH HOH . 
G 4 HOH A 4 704 4 HOH HOH . 
G 4 HOH A 5 705 5 HOH HOH . 
G 4 HOH A 6 706 6 HOH HOH . 
G 4 HOH A 7 707 7 HOH HOH . 
G 4 HOH A 8 708 8 HOH HOH . 
G 4 HOH A 9 709 9 HOH HOH . 
G 4 HOH A 10 710 10 HOH HOH . 
G 4 HOH A 11 711 11 HOH HOH . 
G 4 HOH A 12 712 12 HOH HOH . 
G 4 HOH A 13 713 13 HOH HOH . 
G 4 HOH A 14 714 14 HOH HOH . 
G 4 HOH A 15 715 15 HOH HOH . 
G 4 HOH A 16 716 16 HOH HOH . 
G 4 HOH A 17 717 17 HOH HOH . 
G 4 HOH A 18 718 18 HOH HOH . 
G 4 HOH A 19 719 19 HOH HOH . 
G 4 HOH A 20 720 20 HOH HOH . 
G 4 HOH A 21 721 21 HOH HOH . 
G 4 HOH A 22 722 22 HOH HOH . 
G 4 HOH A 23 723 23 HOH HOH . 
G 4 HOH A 24 724 24 HOH HOH . 
G 4 HOH A 25 725 25 HOH HOH . 
G 4 HOH A 26 726 26 HOH HOH . 
G 4 HOH A 27 727 27 HOH HOH . 
G 4 HOH A 28 728 28 HOH HOH . 
G 4 HOH A 29 729 29 HOH HOH . 
G 4 HOH A 30 730 30 HOH HOH . 
G 4 HOH A 31 731 31 HOH HOH . 
G 4 HOH A 32 732 32 HOH HOH . 
G 4 HOH A 33 733 33 HOH HOH . 
G 4 HOH A 34 734 34 HOH HOH . 
G 4 HOH A 35 735 35 HOH HOH . 
G 4 HOH A 36 736 36 HOH HOH . 
G 4 HOH A 37 737 37 HOH HOH . 
G 4 HOH A 38 738 38 HOH HOH . 
G 4 HOH A 39 739 39 HOH HOH . 
G 4 HOH A 40 740 40 HOH HOH . 
G 4 HOH A 41 741 41 HOH HOH . 
G 4 HOH A 42 742 42 HOH HOH . 
G 4 HOH A 43 743 43 HOH HOH . 
G 4 HOH A 44 744 44 HOH HOH . 
G 4 HOH A 45 745 45 HOH HOH . 
G 4 HOH A 46 746 46 HOH HOH . 
G 4 HOH A 47 747 47 HOH HOH . 
G 4 HOH A 48 748 48 HOH HOH . 
G 4 HOH A 49 749 49 HOH HOH . 
G 4 HOH A 50 750 50 HOH HOH . 
G 4 HOH A 51 751 51 HOH HOH . 
G 4 HOH A 52 752 52 HOH HOH . 
G 4 HOH A 53 753 53 HOH HOH . 
G 4 HOH A 54 754 54 HOH HOH . 
G 4 HOH A 55 755 55 HOH HOH . 
G 4 HOH A 56 756 56 HOH HOH . 
G 4 HOH A 57 757 57 HOH HOH . 
G 4 HOH A 58 758 58 HOH HOH . 
G 4 HOH A 59 759 59 HOH HOH . 
G 4 HOH A 60 760 60 HOH HOH . 
G 4 HOH A 61 761 61 HOH HOH . 
G 4 HOH A 62 762 62 HOH HOH . 
G 4 HOH A 63 763 63 HOH HOH . 
G 4 HOH A 64 764 65 HOH HOH . 
G 4 HOH A 65 765 66 HOH HOH . 
G 4 HOH A 66 766 67 HOH HOH . 
G 4 HOH A 67 767 68 HOH HOH . 
G 4 HOH A 68 768 69 HOH HOH . 
G 4 HOH A 69 769 70 HOH HOH . 
G 4 HOH A 70 770 71 HOH HOH . 
G 4 HOH A 71 771 72 HOH HOH . 
G 4 HOH A 72 772 73 HOH HOH . 
G 4 HOH A 73 773 74 HOH HOH . 
G 4 HOH A 74 774 75 HOH HOH . 
G 4 HOH A 75 775 76 HOH HOH . 
G 4 HOH A 76 776 77 HOH HOH . 
G 4 HOH A 77 777 78 HOH HOH . 
G 4 HOH A 78 778 79 HOH HOH . 
G 4 HOH A 79 779 80 HOH HOH . 
H 4 HOH B 1 701 64 HOH HOH . 
H 4 HOH B 2 702 1 HOH HOH . 
H 4 HOH B 3 703 2 HOH HOH . 
H 4 HOH B 4 704 3 HOH HOH . 
H 4 HOH B 5 705 4 HOH HOH . 
H 4 HOH B 6 706 5 HOH HOH . 
H 4 HOH B 7 707 6 HOH HOH . 
H 4 HOH B 8 708 7 HOH HOH . 
H 4 HOH B 9 709 8 HOH HOH . 
H 4 HOH B 10 710 9 HOH HOH . 
H 4 HOH B 11 711 10 HOH HOH . 
H 4 HOH B 12 712 11 HOH HOH . 
H 4 HOH B 13 713 12 HOH HOH . 
H 4 HOH B 14 714 13 HOH HOH . 
H 4 HOH B 15 715 14 HOH HOH . 
H 4 HOH B 16 716 15 HOH HOH . 
H 4 HOH B 17 717 16 HOH HOH . 
H 4 HOH B 18 718 17 HOH HOH . 
H 4 HOH B 19 719 18 HOH HOH . 
H 4 HOH B 20 720 19 HOH HOH . 
H 4 HOH B 21 721 20 HOH HOH . 
H 4 HOH B 22 722 21 HOH HOH . 
H 4 HOH B 23 723 22 HOH HOH . 
H 4 HOH B 24 724 23 HOH HOH . 
H 4 HOH B 25 725 24 HOH HOH . 
H 4 HOH B 26 726 25 HOH HOH . 
H 4 HOH B 27 727 26 HOH HOH . 
H 4 HOH B 28 728 27 HOH HOH . 
H 4 HOH B 29 729 28 HOH HOH . 
H 4 HOH B 30 730 29 HOH HOH . 
H 4 HOH B 31 731 30 HOH HOH . 
H 4 HOH B 32 732 31 HOH HOH . 
H 4 HOH B 33 733 32 HOH HOH . 
H 4 HOH B 34 734 33 HOH HOH . 
H 4 HOH B 35 735 34 HOH HOH . 
H 4 HOH B 36 736 35 HOH HOH . 
H 4 HOH B 37 737 36 HOH HOH . 
H 4 HOH B 38 738 37 HOH HOH . 
H 4 HOH B 39 739 38 HOH HOH . 
H 4 HOH B 40 740 39 HOH HOH . 
H 4 HOH B 41 741 40 HOH HOH . 
H 4 HOH B 42 742 41 HOH HOH . 
H 4 HOH B 43 743 42 HOH HOH . 
H 4 HOH B 44 744 43 HOH HOH . 
H 4 HOH B 45 745 44 HOH HOH . 
H 4 HOH B 46 746 45 HOH HOH . 
H 4 HOH B 47 747 46 HOH HOH . 
H 4 HOH B 48 748 47 HOH HOH . 
H 4 HOH B 49 749 48 HOH HOH . 
H 4 HOH B 50 750 49 HOH HOH . 
H 4 HOH B 51 751 50 HOH HOH . 
H 4 HOH B 52 752 51 HOH HOH . 
H 4 HOH B 53 753 52 HOH HOH . 
H 4 HOH B 54 754 53 HOH HOH . 
H 4 HOH B 55 755 54 HOH HOH . 
H 4 HOH B 56 756 55 HOH HOH . 
H 4 HOH B 57 757 56 HOH HOH . 
H 4 HOH B 58 758 57 HOH HOH . 
H 4 HOH B 59 759 58 HOH HOH . 
H 4 HOH B 60 760 59 HOH HOH . 
H 4 HOH B 61 761 60 HOH HOH . 
H 4 HOH B 62 762 61 HOH HOH . 
H 4 HOH B 63 763 62 HOH HOH . 
H 4 HOH B 64 764 63 HOH HOH . 
H 4 HOH B 65 765 64 HOH HOH . 
H 4 HOH B 66 766 65 HOH HOH . 
H 4 HOH B 67 767 66 HOH HOH . 
H 4 HOH B 68 768 67 HOH HOH . 
H 4 HOH B 69 769 68 HOH HOH . 
H 4 HOH B 70 770 69 HOH HOH . 
H 4 HOH B 71 771 70 HOH HOH . 
H 4 HOH B 72 772 71 HOH HOH . 
H 4 HOH B 73 773 72 HOH HOH . 
H 4 HOH B 74 774 73 HOH HOH . 
H 4 HOH B 75 775 74 HOH HOH . 
H 4 HOH B 76 776 75 HOH HOH . 
H 4 HOH B 77 777 76 HOH HOH . 
H 4 HOH B 78 778 77 HOH HOH . 
H 4 HOH B 79 779 78 HOH HOH . 
H 4 HOH B 80 780 79 HOH HOH . 
H 4 HOH B 81 781 80 HOH HOH . 
H 4 HOH B 82 782 81 HOH HOH . 
H 4 HOH B 83 783 82 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C FMT . . . F 3 -7.028 15.419 -25.28 1 13.13 ? C FMT 602 B 1 
HETATM 2 O O1 FMT . . . F 3 -6.366 14.63 -25.889 1 18.46 ? O1 FMT 602 B 1 
HETATM 3 O O2 FMT . . . F 3 -7.089 16.648 -25.752 1 16.63 ? O2 FMT 602 B 1 
#
_model_server_stats.io_time_ms              22 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           321 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           3 
#