data_4DIB # _model_server_result.job_id F3r16-x88qfthaAjNXj32Q _model_server_result.datetime_utc '2024-11-10 01:23:43' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4dib # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":401}' # _entry.id 4DIB # _exptl.entry_id 4DIB _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 7 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90.32 _cell.angle_beta 73.99 _cell.angle_gamma 68.99 _cell.entry_id 4DIB _cell.length_a 75.347 _cell.length_b 102.044 _cell.length_c 102.144 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4DIB _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA tetrameric 4 author_and_software_defined_assembly 1 PISA tetrameric 4 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,D,E,F,I,K,L,M,P,S,T,U 1 1 B,C,G,H,J,N,O,Q,R,V,W 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 I N N ? 2 J N N ? 2 K N N ? 2 L N N ? 2 M N N ? 2 N N N ? 2 O N N # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 290 n n S O2 SO4 doub 291 n n S O3 SO4 sing 292 n n S O4 SO4 sing 293 n n # _atom_sites.entry_id 4DIB _atom_sites.fract_transf_matrix[1][1] 0.013272 _atom_sites.fract_transf_matrix[1][2] -0.005097 _atom_sites.fract_transf_matrix[1][3] -0.004431 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010497 _atom_sites.fract_transf_matrix[2][3] 0.001229 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010255 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code I 2 SO4 A 1 401 5 SO4 SO4 . J 2 SO4 C 1 401 2 SO4 SO4 . K 2 SO4 D 1 401 8 SO4 SO4 . L 2 SO4 E 1 401 3 SO4 SO4 . M 2 SO4 F 1 401 7 SO4 SO4 . N 2 SO4 H 1 401 1 SO4 SO4 . O 2 SO4 H 1 402 6 SO4 SO4 . P 3 HOH A 1 501 5 HOH HOH . P 3 HOH A 2 502 15 HOH HOH . P 3 HOH A 3 503 22 HOH HOH . P 3 HOH A 4 504 25 HOH HOH . P 3 HOH A 5 505 28 HOH HOH . P 3 HOH A 6 506 47 HOH HOH . P 3 HOH A 7 507 50 HOH HOH . P 3 HOH A 8 508 64 HOH HOH . P 3 HOH A 9 509 67 HOH HOH . P 3 HOH A 10 510 69 HOH HOH . P 3 HOH A 11 511 77 HOH HOH . P 3 HOH A 12 512 120 HOH HOH . P 3 HOH A 13 513 124 HOH HOH . P 3 HOH A 14 514 138 HOH HOH . P 3 HOH A 15 515 142 HOH HOH . P 3 HOH A 16 516 149 HOH HOH . P 3 HOH A 17 517 158 HOH HOH . P 3 HOH A 18 518 165 HOH HOH . P 3 HOH A 19 519 170 HOH HOH . P 3 HOH A 20 520 174 HOH HOH . P 3 HOH A 21 521 40 HOH HOH . P 3 HOH A 22 522 65 HOH HOH . P 3 HOH A 23 523 66 HOH HOH . P 3 HOH A 24 524 84 HOH HOH . P 3 HOH A 25 525 92 HOH HOH . P 3 HOH A 26 526 94 HOH HOH . P 3 HOH A 27 527 401 HOH HOH . P 3 HOH A 28 528 441 HOH HOH . P 3 HOH A 29 529 265 HOH HOH . P 3 HOH A 30 530 16 HOH HOH . P 3 HOH A 31 531 25 HOH HOH . P 3 HOH A 32 532 196 HOH HOH . P 3 HOH A 33 533 491 HOH HOH . P 3 HOH A 34 534 21 HOH HOH . P 3 HOH A 35 535 82 HOH HOH . P 3 HOH A 36 536 114 HOH HOH . P 3 HOH A 37 537 477 HOH HOH . P 3 HOH A 38 538 581 HOH HOH . Q 3 HOH B 1 401 17 HOH HOH . Q 3 HOH B 2 402 19 HOH HOH . Q 3 HOH B 3 403 23 HOH HOH . Q 3 HOH B 4 404 29 HOH HOH . Q 3 HOH B 5 405 35 HOH HOH . Q 3 HOH B 6 406 36 HOH HOH . Q 3 HOH B 7 407 45 HOH HOH . Q 3 HOH B 8 408 51 HOH HOH . Q 3 HOH B 9 409 56 HOH HOH . Q 3 HOH B 10 410 63 HOH HOH . Q 3 HOH B 11 411 66 HOH HOH . Q 3 HOH B 12 412 73 HOH HOH . Q 3 HOH B 13 413 82 HOH HOH . Q 3 HOH B 14 414 88 HOH HOH . Q 3 HOH B 15 415 89 HOH HOH . Q 3 HOH B 16 416 94 HOH HOH . Q 3 HOH B 17 417 103 HOH HOH . Q 3 HOH B 18 418 113 HOH HOH . Q 3 HOH B 19 419 119 HOH HOH . Q 3 HOH B 20 420 159 HOH HOH . Q 3 HOH B 21 421 190 HOH HOH . Q 3 HOH B 22 422 197 HOH HOH . Q 3 HOH B 23 423 12 HOH HOH . Q 3 HOH B 24 424 15 HOH HOH . Q 3 HOH B 25 425 32 HOH HOH . Q 3 HOH B 26 426 62 HOH HOH . Q 3 HOH B 27 427 154 HOH HOH . Q 3 HOH B 28 428 183 HOH HOH . Q 3 HOH B 29 429 213 HOH HOH . Q 3 HOH B 30 430 356 HOH HOH . Q 3 HOH B 31 431 124 HOH HOH . Q 3 HOH B 32 432 240 HOH HOH . Q 3 HOH B 33 433 136 HOH HOH . Q 3 HOH B 34 434 283 HOH HOH . Q 3 HOH B 35 435 275 HOH HOH . Q 3 HOH B 36 436 21 HOH HOH . Q 3 HOH B 37 437 122 HOH HOH . Q 3 HOH B 38 438 450 HOH HOH . Q 3 HOH B 39 439 605 HOH HOH . R 3 HOH C 1 501 10 HOH HOH . R 3 HOH C 2 502 26 HOH HOH . R 3 HOH C 3 503 60 HOH HOH . R 3 HOH C 4 504 85 HOH HOH . R 3 HOH C 5 505 109 HOH HOH . R 3 HOH C 6 506 110 HOH HOH . R 3 HOH C 7 507 116 HOH HOH . R 3 HOH C 8 508 134 HOH HOH . R 3 HOH C 9 509 166 HOH HOH . R 3 HOH C 10 510 172 HOH HOH . R 3 HOH C 11 511 181 HOH HOH . R 3 HOH C 12 512 183 HOH HOH . R 3 HOH C 13 513 184 HOH HOH . R 3 HOH C 14 514 196 HOH HOH . R 3 HOH C 15 515 13 HOH HOH . R 3 HOH C 16 516 16 HOH HOH . R 3 HOH C 17 517 164 HOH HOH . R 3 HOH C 18 518 272 HOH HOH . R 3 HOH C 19 519 369 HOH HOH . R 3 HOH C 20 520 701 HOH HOH . R 3 HOH C 21 521 79 HOH HOH . R 3 HOH C 22 522 151 HOH HOH . R 3 HOH C 23 523 178 HOH HOH . R 3 HOH C 24 524 669 HOH HOH . R 3 HOH C 25 525 6 HOH HOH . R 3 HOH C 26 526 574 HOH HOH . R 3 HOH C 27 527 20 HOH HOH . R 3 HOH C 28 528 23 HOH HOH . R 3 HOH C 29 529 58 HOH HOH . R 3 HOH C 30 530 125 HOH HOH . R 3 HOH C 31 531 435 HOH HOH . R 3 HOH C 32 532 550 HOH HOH . S 3 HOH D 1 501 14 HOH HOH . S 3 HOH D 2 502 21 HOH HOH . S 3 HOH D 3 503 36 HOH HOH . S 3 HOH D 4 504 168 HOH HOH . S 3 HOH D 5 505 228 HOH HOH . S 3 HOH D 6 506 336 HOH HOH . S 3 HOH D 7 507 121 HOH HOH . S 3 HOH D 8 508 4 HOH HOH . S 3 HOH D 9 509 15 HOH HOH . S 3 HOH D 10 510 20 HOH HOH . S 3 HOH D 11 511 27 HOH HOH . S 3 HOH D 12 512 41 HOH HOH . S 3 HOH D 13 513 109 HOH HOH . S 3 HOH D 14 514 234 HOH HOH . S 3 HOH D 15 515 5 HOH HOH . S 3 HOH D 16 516 108 HOH HOH . S 3 HOH D 17 517 174 HOH HOH . S 3 HOH D 18 518 234 HOH HOH . T 3 HOH E 1 501 12 HOH HOH . T 3 HOH E 2 502 13 HOH HOH . T 3 HOH E 3 503 27 HOH HOH . T 3 HOH E 4 504 32 HOH HOH . T 3 HOH E 5 505 37 HOH HOH . T 3 HOH E 6 506 41 HOH HOH . T 3 HOH E 7 507 48 HOH HOH . T 3 HOH E 8 508 54 HOH HOH . T 3 HOH E 9 509 70 HOH HOH . T 3 HOH E 10 510 104 HOH HOH . T 3 HOH E 11 511 117 HOH HOH . T 3 HOH E 12 512 122 HOH HOH . T 3 HOH E 13 513 150 HOH HOH . T 3 HOH E 14 514 169 HOH HOH . T 3 HOH E 15 515 175 HOH HOH . T 3 HOH E 16 516 192 HOH HOH . T 3 HOH E 17 517 193 HOH HOH . T 3 HOH E 18 518 194 HOH HOH . T 3 HOH E 19 519 27 HOH HOH . T 3 HOH E 20 520 93 HOH HOH . T 3 HOH E 21 521 107 HOH HOH . T 3 HOH E 22 522 156 HOH HOH . T 3 HOH E 23 523 162 HOH HOH . T 3 HOH E 24 524 177 HOH HOH . T 3 HOH E 25 525 200 HOH HOH . T 3 HOH E 26 526 245 HOH HOH . T 3 HOH E 27 527 270 HOH HOH . T 3 HOH E 28 528 414 HOH HOH . T 3 HOH E 29 529 481 HOH HOH . T 3 HOH E 30 530 688 HOH HOH . T 3 HOH E 31 531 700 HOH HOH . T 3 HOH E 32 532 18 HOH HOH . T 3 HOH E 33 533 87 HOH HOH . T 3 HOH E 34 534 203 HOH HOH . T 3 HOH E 35 535 205 HOH HOH . T 3 HOH E 36 536 150 HOH HOH . T 3 HOH E 37 537 229 HOH HOH . T 3 HOH E 38 538 298 HOH HOH . T 3 HOH E 39 539 631 HOH HOH . T 3 HOH E 40 540 623 HOH HOH . T 3 HOH E 41 541 34 HOH HOH . T 3 HOH E 42 542 598 HOH HOH . T 3 HOH E 43 543 605 HOH HOH . U 3 HOH F 1 501 109 HOH HOH . U 3 HOH F 2 502 175 HOH HOH . U 3 HOH F 3 503 255 HOH HOH . U 3 HOH F 4 504 330 HOH HOH . U 3 HOH F 5 505 360 HOH HOH . U 3 HOH F 6 506 580 HOH HOH . U 3 HOH F 7 507 50 HOH HOH . U 3 HOH F 8 508 196 HOH HOH . U 3 HOH F 9 509 52 HOH HOH . U 3 HOH F 10 510 59 HOH HOH . U 3 HOH F 11 511 73 HOH HOH . U 3 HOH F 12 512 77 HOH HOH . U 3 HOH F 13 513 79 HOH HOH . U 3 HOH F 14 514 83 HOH HOH . U 3 HOH F 15 515 101 HOH HOH . U 3 HOH F 16 516 105 HOH HOH . U 3 HOH F 17 517 122 HOH HOH . U 3 HOH F 18 518 135 HOH HOH . U 3 HOH F 19 519 225 HOH HOH . U 3 HOH F 20 520 389 HOH HOH . U 3 HOH F 21 521 18 HOH HOH . U 3 HOH F 22 522 625 HOH HOH . U 3 HOH F 23 523 1 HOH HOH . U 3 HOH F 24 524 31 HOH HOH . U 3 HOH F 25 525 62 HOH HOH . U 3 HOH F 26 526 310 HOH HOH . U 3 HOH F 27 527 25 HOH HOH . U 3 HOH F 28 528 31 HOH HOH . U 3 HOH F 29 529 201 HOH HOH . V 3 HOH G 1 401 6 HOH HOH . V 3 HOH G 2 402 31 HOH HOH . V 3 HOH G 3 403 58 HOH HOH . V 3 HOH G 4 404 76 HOH HOH . V 3 HOH G 5 405 80 HOH HOH . V 3 HOH G 6 406 84 HOH HOH . V 3 HOH G 7 407 126 HOH HOH . V 3 HOH G 8 408 129 HOH HOH . V 3 HOH G 9 409 163 HOH HOH . V 3 HOH G 10 410 168 HOH HOH . V 3 HOH G 11 411 176 HOH HOH . V 3 HOH G 12 412 178 HOH HOH . V 3 HOH G 13 413 198 HOH HOH . V 3 HOH G 14 414 50 HOH HOH . V 3 HOH G 15 415 52 HOH HOH . V 3 HOH G 16 416 89 HOH HOH . V 3 HOH G 17 417 157 HOH HOH . V 3 HOH G 18 418 182 HOH HOH . V 3 HOH G 19 419 209 HOH HOH . V 3 HOH G 20 420 350 HOH HOH . V 3 HOH G 21 421 159 HOH HOH . V 3 HOH G 22 422 311 HOH HOH . V 3 HOH G 23 423 570 HOH HOH . V 3 HOH G 24 424 208 HOH HOH . V 3 HOH G 25 425 11 HOH HOH . V 3 HOH G 26 426 145 HOH HOH . V 3 HOH G 27 427 217 HOH HOH . V 3 HOH G 28 428 301 HOH HOH . W 3 HOH H 1 501 4 HOH HOH . W 3 HOH H 2 502 53 HOH HOH . W 3 HOH H 3 503 62 HOH HOH . W 3 HOH H 4 504 68 HOH HOH . W 3 HOH H 5 505 71 HOH HOH . W 3 HOH H 6 506 72 HOH HOH . W 3 HOH H 7 507 78 HOH HOH . W 3 HOH H 8 508 97 HOH HOH . W 3 HOH H 9 509 105 HOH HOH . W 3 HOH H 10 510 111 HOH HOH . W 3 HOH H 11 511 118 HOH HOH . W 3 HOH H 12 512 133 HOH HOH . W 3 HOH H 13 513 147 HOH HOH . W 3 HOH H 14 514 152 HOH HOH . W 3 HOH H 15 515 187 HOH HOH . W 3 HOH H 16 516 188 HOH HOH . W 3 HOH H 17 517 191 HOH HOH . W 3 HOH H 18 518 1 HOH HOH . W 3 HOH H 19 519 46 HOH HOH . W 3 HOH H 20 520 49 HOH HOH . W 3 HOH H 21 521 78 HOH HOH . W 3 HOH H 22 522 249 HOH HOH . W 3 HOH H 23 523 322 HOH HOH . W 3 HOH H 24 524 324 HOH HOH . W 3 HOH H 25 525 703 HOH HOH . W 3 HOH H 26 526 149 HOH HOH . W 3 HOH H 27 527 77 HOH HOH . W 3 HOH H 28 528 169 HOH HOH . W 3 HOH H 29 529 241 HOH HOH . W 3 HOH H 30 530 438 HOH HOH . W 3 HOH H 31 531 86 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . J 2 -51.529 -37.388 -73.028 1 46.04 ? S SO4 401 C 1 HETATM 2 O O1 SO4 . . . J 2 -52.913 -37.069 -73.495 1 41.47 ? O1 SO4 401 C 1 HETATM 3 O O2 SO4 . . . J 2 -51.062 -38.689 -73.568 1 41.19 ? O2 SO4 401 C 1 HETATM 4 O O3 SO4 . . . J 2 -51.514 -37.461 -71.538 1 47.33 ? O3 SO4 401 C 1 HETATM 5 O O4 SO4 . . . J 2 -50.59 -36.326 -73.449 1 41.58 ? O4 SO4 401 C 1 # _model_server_stats.io_time_ms 66 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 17 _model_server_stats.query_time_ms 313 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 5 #