data_4DK8 # _model_server_result.job_id YYJJ0CXMU7LB0WaUcmbZaA _model_server_result.datetime_utc '2024-11-25 23:13:09' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4dk8 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":501}' # _entry.id 4DK8 # _exptl.entry_id 4DK8 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 468.489 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-methyl-N-(4-{(1S)-2,2,2-trifluoro-1-hydroxy-1-[1-(2-methoxyethyl)-1H-pyrrol-2-yl]ethyl}phenyl)benzenesulfonamide _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4DK8 _cell.length_a 88.145 _cell.length_b 88.145 _cell.length_c 198.45 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4DK8 _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 K N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OE1 GLN 21 A GLN 235 1_555 G CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.089 ? metalc ? metalc2 A OE1 GLU 111 A GLU 325 1_555 I CA CA . A CA 505 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.607 ? metalc ? metalc3 A OE2 GLU 111 A GLU 325 1_555 I CA CA . A CA 505 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.657 ? metalc ? metalc4 A OD2 ASP 125 A ASP 339 1_555 H CA CA . A CA 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.92 ? metalc ? metalc5 F O ACT . A ACT 502 1_555 I CA CA . A CA 505 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.026 ? metalc ? metalc6 F OXT ACT . A ACT 502 1_555 I CA CA . A CA 505 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.07 ? metalc ? metalc7 C O THR 120 C THR 334 1_555 M CA CA . C CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.859 ? metalc ? metalc8 C OG1 THR 120 C THR 334 1_555 M CA CA . C CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.908 ? # _chem_comp.formula 'C22 H23 F3 N2 O4 S' _chem_comp.formula_weight 468.489 _chem_comp.id 0KT _chem_comp.mon_nstd_flag . _chem_comp.name N-methyl-N-(4-{(1S)-2,2,2-trifluoro-1-hydroxy-1-[1-(2-methoxyethyl)-1H-pyrrol-2-yl]ethyl}phenyl)benzenesulfonamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C17 C16 0KT doub 1 n y C17 C14 0KT sing 2 n y C16 N2 0KT sing 3 n y C14 C19 0KT doub 4 n y N2 C19 0KT sing 5 n y N2 C15 0KT sing 6 n n C19 C18 0KT sing 7 n n F9 C20 0KT sing 8 n n F7 C20 0KT sing 9 n n C15 C21 0KT sing 10 n n C2 C4 0KT doub 11 n y C2 C1 0KT sing 12 n y C20 C18 0KT sing 13 n n C20 F8 0KT sing 14 n n C21 O2 0KT sing 15 n n C18 C1 0KT sing 16 n n C18 O1 0KT sing 17 n n C4 C6 0KT sing 18 n y O2 C23 0KT sing 19 n n C1 C3 0KT doub 20 n y O5 S2 0KT doub 21 n n C6 N1 0KT sing 22 n n C6 C5 0KT doub 23 n y N1 S2 0KT sing 24 n n N1 C7 0KT sing 25 n n C3 C5 0KT sing 26 n y S2 O4 0KT doub 27 n n S2 C8 0KT sing 28 n n C9 C8 0KT doub 29 n y C9 C12 0KT sing 30 n y C8 C10 0KT sing 31 n y C12 C13 0KT doub 32 n y C10 C11 0KT doub 33 n y C13 C11 0KT sing 34 n y C2 H1 0KT sing 35 n n C3 H2 0KT sing 36 n n C4 H3 0KT sing 37 n n C5 H4 0KT sing 38 n n C9 H5 0KT sing 39 n n C10 H6 0KT sing 40 n n C11 H7 0KT sing 41 n n C12 H8 0KT sing 42 n n C13 H9 0KT sing 43 n n C7 H10 0KT sing 44 n n C7 H11 0KT sing 45 n n C7 H12 0KT sing 46 n n O1 H13 0KT sing 47 n n C14 H14 0KT sing 48 n n C16 H15 0KT sing 49 n n C17 H16 0KT sing 50 n n C15 H17 0KT sing 51 n n C15 H18 0KT sing 52 n n C21 H19 0KT sing 53 n n C21 H20 0KT sing 54 n n C23 H21 0KT sing 55 n n C23 H22 0KT sing 56 n n C23 H23 0KT sing 57 n n # _atom_sites.entry_id 4DK8 _atom_sites.fract_transf_matrix[1][1] 0.011345 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011345 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005039 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 0KT A 1 501 1 0KT 0KT . F 4 ACT A 1 502 1 ACT ACT . G 5 CA A 1 503 1 CA CA . H 5 CA A 1 504 2 CA CA . I 5 CA A 1 505 5 CA CA . J 5 CA A 1 506 6 CA CA . K 3 0KT C 1 501 1 0KT 0KT . L 5 CA C 1 502 3 CA CA . M 5 CA C 1 503 4 CA CA . N 6 HOH A 1 601 1 HOH HOH . N 6 HOH A 2 602 2 HOH HOH . N 6 HOH A 3 603 3 HOH HOH . N 6 HOH A 4 604 4 HOH HOH . N 6 HOH A 5 605 5 HOH HOH . N 6 HOH A 6 606 6 HOH HOH . N 6 HOH A 7 607 7 HOH HOH . N 6 HOH A 8 608 8 HOH HOH . O 6 HOH C 1 601 9 HOH HOH . O 6 HOH C 2 602 10 HOH HOH . O 6 HOH C 3 603 11 HOH HOH . O 6 HOH C 4 604 12 HOH HOH . O 6 HOH C 5 605 13 HOH HOH . O 6 HOH C 6 606 14 HOH HOH . O 6 HOH C 7 607 16 HOH HOH . P 6 HOH D 1 401 15 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 0KT . . . E 3 39.75 66.612 40.616 1 88.43 ? C1 0KT 501 A 1 HETATM 2 C C2 0KT . . . E 3 40.33 67.617 39.778 1 90.04 ? C2 0KT 501 A 1 HETATM 3 C C3 0KT . . . E 3 40.316 66.407 41.886 1 90.73 ? C3 0KT 501 A 1 HETATM 4 C C4 0KT . . . E 3 41.44 68.357 40.196 1 90.81 ? C4 0KT 501 A 1 HETATM 5 C C5 0KT . . . E 3 41.416 67.144 42.303 1 91.83 ? C5 0KT 501 A 1 HETATM 6 C C6 0KT . . . E 3 41.998 68.127 41.468 1 93.66 ? C6 0KT 501 A 1 HETATM 7 N N1 0KT . . . E 3 43.156 68.861 41.824 1 97.62 ? N1 0KT 501 A 1 HETATM 8 S S2 0KT . . . E 3 44.662 67.96 42.236 1 102.65 ? S2 0KT 501 A 1 HETATM 9 O O4 0KT . . . E 3 45.637 68.99 42.493 1 104.11 ? O4 0KT 501 A 1 HETATM 10 O O5 0KT . . . E 3 44.901 67.086 41.099 1 100.89 ? O5 0KT 501 A 1 HETATM 11 C C8 0KT . . . E 3 44.562 66.967 43.715 1 97.42 ? C8 0KT 501 A 1 HETATM 12 C C9 0KT . . . E 3 44.06 65.645 43.659 1 95.75 ? C9 0KT 501 A 1 HETATM 13 C C10 0KT . . . E 3 44.992 67.523 44.945 1 95.56 ? C10 0KT 501 A 1 HETATM 14 C C11 0KT . . . E 3 44.918 66.755 46.128 1 96.64 ? C11 0KT 501 A 1 HETATM 15 C C12 0KT . . . E 3 43.985 64.878 44.845 1 96.68 ? C12 0KT 501 A 1 HETATM 16 C C13 0KT . . . E 3 44.413 65.433 46.08 1 96.32 ? C13 0KT 501 A 1 HETATM 17 C C7 0KT . . . E 3 42.703 69.822 42.859 1 94.47 ? C7 0KT 501 A 1 HETATM 18 C C18 0KT . . . E 3 38.566 65.766 40.174 1 86.68 ? C18 0KT 501 A 1 HETATM 19 C C19 0KT . . . E 3 38.942 65.048 38.85 1 86.57 ? C19 0KT 501 A 1 HETATM 20 C C20 0KT . . . E 3 37.275 66.66 40.047 1 85.97 ? C20 0KT 501 A 1 HETATM 21 F F7 0KT . . . E 3 36.229 65.922 39.668 1 86.85 ? F7 0KT 501 A 1 HETATM 22 F F9 0KT . . . E 3 37.406 67.624 39.141 1 84.82 ? F9 0KT 501 A 1 HETATM 23 F F8 0KT . . . E 3 37.009 67.244 41.214 1 85.37 ? F8 0KT 501 A 1 HETATM 24 O O1 0KT . . . E 3 38.223 64.811 41.177 1 85.47 ? O1 0KT 501 A 1 HETATM 25 C C14 0KT . . . E 3 38.366 65.228 37.569 1 87.26 ? C14 0KT 501 A 1 HETATM 26 N N2 0KT . . . E 3 39.937 64.104 38.728 1 85.31 ? N2 0KT 501 A 1 HETATM 27 C C16 0KT . . . E 3 39.977 63.713 37.425 1 86.43 ? C16 0KT 501 A 1 HETATM 28 C C17 0KT . . . E 3 39.016 64.393 36.689 1 88.48 ? C17 0KT 501 A 1 HETATM 29 C C15 0KT . . . E 3 40.864 63.538 39.75 1 82.93 ? C15 0KT 501 A 1 HETATM 30 C C21 0KT . . . E 3 40.465 62.121 40.162 1 79.84 ? C21 0KT 501 A 1 HETATM 31 O O2 0KT . . . E 3 39.087 62.001 40.467 1 79.17 ? O2 0KT 501 A 1 HETATM 32 C C23 0KT . . . E 3 38.817 60.885 41.293 1 78.32 ? C23 0KT 501 A 1 # _model_server_stats.io_time_ms 56 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 275 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 32 #