data_4DKI # _model_server_result.job_id kQHJlKPpyFZqAgJhkxwPiw _model_server_result.datetime_utc '2024-10-11 01:28:38' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4dki # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"K","auth_seq_id":709}' # _entry.id 4DKI # _exptl.entry_id 4DKI _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 35.453 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CHLORIDE ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4DKI _cell.length_a 80.847 _cell.length_b 103.471 _cell.length_c 186.5 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4DKI _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 PISA dimeric 2 software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,H,I,J,K,T 1 1 B,L,M,N,O,P,Q,R,S,U 2 1 A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 J N N ? 5 K N N ? 5 R N N ? 5 S N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A OG SER 381 A SER 403 1_555 C C RB6 . A RB6 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.423 ? covale ? covale2 B OG SER 381 B SER 403 1_555 L C RB6 . B RB6 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.426 ? metalc ? metalc1 A O GLY 113 A GLY 135 1_555 I CD CD . A CD 707 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.368 ? metalc ? metalc2 A ND1 HIS 121 A HIS 143 1_555 G CD CD . A CD 705 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.372 ? metalc ? metalc3 A OE1 GLU 123 A GLU 145 1_555 G CD CD . A CD 705 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.213 ? metalc ? metalc4 A OE2 GLU 123 A GLU 145 1_555 N CD CD . B CD 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.283 ? metalc ? metalc5 A OD1 ASP 187 A ASP 209 1_555 O CD CD . B CD 704 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.199 ? metalc ? metalc6 A OD2 ASP 187 A ASP 209 1_555 O CD CD . B CD 704 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.447 ? metalc ? metalc7 A NE2 HIS 289 A HIS 311 1_555 I CD CD . A CD 707 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.377 ? metalc ? metalc8 G CD CD . A CD 705 1_555 B OE2 GLU 123 B GLU 145 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.415 ? metalc ? metalc9 I CD CD . A CD 707 1_555 B OD2 ASP 187 B ASP 209 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.159 ? metalc ? metalc10 I CD CD . A CD 707 1_555 B OD1 ASP 187 B ASP 209 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.193 ? metalc ? metalc11 B O GLY 113 B GLY 135 1_555 O CD CD . B CD 704 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.325 ? metalc ? metalc12 B ND1 HIS 121 B HIS 143 1_555 N CD CD . B CD 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.286 ? metalc ? metalc13 B OE1 GLU 123 B GLU 145 1_555 N CD CD . B CD 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.162 ? metalc ? metalc14 B NE2 HIS 210 B HIS 232 1_555 P CD CD . B CD 705 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.542 ? metalc ? metalc15 B NE2 HIS 289 B HIS 311 1_555 O CD CD . B CD 704 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.314 ? metalc ? metalc16 B OD2 ASP 551 B ASP 573 1_555 Q CD CD . B CD 706 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.448 ? metalc ? metalc17 B OD1 ASP 551 B ASP 573 1_555 Q CD CD . B CD 706 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.532 ? # _chem_comp.formula 'Cl -1' _chem_comp.formula_weight 35.453 _chem_comp.id CL _chem_comp.mon_nstd_flag . _chem_comp.name 'CHLORIDE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4DKI _atom_sites.fract_transf_matrix[1][1] 0.012369 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009665 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005362 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 RB6 A 1 701 669 RB6 RB6 . D 3 BCT A 1 702 1 BCT BCT . E 3 BCT A 1 703 1 BCT BCT . F 3 BCT A 1 704 1 BCT BCT . G 4 CD A 1 705 1001 CD CD . H 4 CD A 1 706 1004 CD CD . I 4 CD A 1 707 1005 CD CD . J 5 CL A 1 708 1009 CL CL . K 5 CL A 1 709 1011 CL CL . L 2 RB6 B 1 701 669 RB6 RB6 . M 3 BCT B 1 702 1 BCT BCT . N 4 CD B 1 703 1002 CD CD . O 4 CD B 1 704 1003 CD CD . P 4 CD B 1 705 1006 CD CD . Q 4 CD B 1 706 1007 CD CD . R 5 CL B 1 707 1008 CL CL . S 5 CL B 1 708 1010 CL CL . T 6 HOH A 1 801 5 HOH HOH . T 6 HOH A 2 802 6 HOH HOH . T 6 HOH A 3 803 7 HOH HOH . T 6 HOH A 4 804 1 HOH HOH . T 6 HOH A 5 805 2 HOH HOH . T 6 HOH A 6 806 11 HOH HOH . T 6 HOH A 7 807 15 HOH HOH . T 6 HOH A 8 808 18 HOH HOH . T 6 HOH A 9 809 20 HOH HOH . T 6 HOH A 10 810 21 HOH HOH . T 6 HOH A 11 811 22 HOH HOH . T 6 HOH A 12 812 23 HOH HOH . T 6 HOH A 13 813 24 HOH HOH . T 6 HOH A 14 814 25 HOH HOH . T 6 HOH A 15 815 1 HOH HOH . T 6 HOH A 16 816 4 HOH HOH . T 6 HOH A 17 817 8 HOH HOH . T 6 HOH A 18 818 11 HOH HOH . U 6 HOH B 1 801 1 HOH HOH . U 6 HOH B 2 802 3 HOH HOH . U 6 HOH B 3 803 8 HOH HOH . U 6 HOH B 4 804 9 HOH HOH . U 6 HOH B 5 805 3 HOH HOH . U 6 HOH B 6 806 4 HOH HOH . U 6 HOH B 7 807 6 HOH HOH . U 6 HOH B 8 808 9 HOH HOH . U 6 HOH B 9 809 12 HOH HOH . U 6 HOH B 10 810 16 HOH HOH . U 6 HOH B 11 811 17 HOH HOH . U 6 HOH B 12 812 19 HOH HOH . U 6 HOH B 13 813 26 HOH HOH . U 6 HOH B 14 814 2 HOH HOH . U 6 HOH B 15 815 3 HOH HOH . U 6 HOH B 16 816 5 HOH HOH . U 6 HOH B 17 817 6 HOH HOH . U 6 HOH B 18 818 7 HOH HOH . U 6 HOH B 19 819 9 HOH HOH . U 6 HOH B 20 820 10 HOH HOH . U 6 HOH B 21 821 12 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CL _atom_site.label_atom_id CL _atom_site.label_comp_id CL _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id K _atom_site.label_entity_id 5 _atom_site.Cartn_x 2.193 _atom_site.Cartn_y 37.853 _atom_site.Cartn_z 8.274 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 47.63 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CL _atom_site.auth_comp_id CL _atom_site.auth_seq_id 709 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 0 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 176 _model_server_stats.query_time_ms 420 _model_server_stats.encode_time_ms 36 _model_server_stats.element_count 1 #