data_4DLL # _model_server_result.job_id m2l7VUy30att2BUnghSFuw _model_server_result.datetime_utc '2025-01-02 18:00:37' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4dll # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":401}' # _entry.id 4DLL # _exptl.entry_id 4DLL _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 92.14 _cell.angle_beta 95.3 _cell.angle_gamma 101.19 _cell.entry_id 4DLL _cell.length_a 39.868 _cell.length_b 47.01 _cell.length_c 77.498 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4DLL _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C SER 41 A SER 41 1_555 A N MSE 42 A MSE 42 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.319 ? covale ? covale2 A C MSE 42 A MSE 42 1_555 A N GLY 43 A GLY 43 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? covale ? covale3 A C PRO 45 A PRO 45 1_555 A N MSE 46 A MSE 46 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale4 A C MSE 46 A MSE 46 1_555 A N ALA 47 A ALA 47 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale5 A C SER 93 A SER 93 1_555 A N MSE 94 A MSE 94 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale6 A C MSE 94 A MSE 94 1_555 A N LEU 95 A LEU 95 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.312 ? covale ? covale7 A C ALA 113 A ALA 113 1_555 A N MSE 114 A MSE 114 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale8 A C MSE 114 A MSE 114 1_555 A N LYS 115 A LYS 115 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale9 A C ASP 122 A ASP 122 1_555 A N MSE 123 A MSE 123 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale10 A C MSE 123 A MSE 123 1_555 A N ALA 124 A ALA 124 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.318 ? covale ? covale11 A C ILE 164 A ILE 164 1_555 A N MSE 165 A MSE 165 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.321 ? covale ? covale12 A C MSE 165 A MSE 165 1_555 A N ALA 166 A ALA 166 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? covale ? covale13 A C GLN 203 A GLN 203 1_555 A N MSE 204 A MSE 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.313 ? covale ? covale14 A C MSE 204 A MSE 204 1_555 A N ILE 205 A ILE 205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale15 A C ASP 226 A ASP 226 1_555 A N MSE 227 A MSE 227 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.315 ? covale ? covale16 A C MSE 227 A MSE 227 1_555 A N ALA 228 A ALA 228 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale17 A C ARG 250 A ARG 250 1_555 A N MSE 251 A MSE 251 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.321 ? covale ? covale18 A C MSE 251 A MSE 251 1_555 A N VAL 252 A VAL 252 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? covale ? covale19 A C ASP 268 A ASP 268 1_555 A N MSE 269 A MSE 269 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.322 ? covale ? covale20 A C MSE 269 A MSE 269 1_555 A N ARG 270 A ARG 270 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? covale ? covale21 B C MSE 42 B MSE 42 1_555 B N GLY 43 B GLY 43 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale22 B C PRO 45 B PRO 45 1_555 B N MSE 46 B MSE 46 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.348 ? covale ? covale23 B C MSE 46 B MSE 46 1_555 B N ALA 47 B ALA 47 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.32 ? covale ? covale24 B C SER 93 B SER 93 1_555 B N MSE 94 B MSE 94 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.31 ? covale ? covale25 B C MSE 94 B MSE 94 1_555 B N LEU 95 B LEU 95 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale26 B C ALA 113 B ALA 113 1_555 B N MSE 114 B MSE 114 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.338 ? covale ? covale27 B C MSE 114 B MSE 114 1_555 B N LYS 115 B LYS 115 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.343 ? covale ? covale28 B C ASP 122 B ASP 122 1_555 B N MSE 123 B MSE 123 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale29 B C MSE 123 B MSE 123 1_555 B N ALA 124 B ALA 124 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale30 B C ILE 164 B ILE 164 1_555 B N MSE 165 B MSE 165 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? covale ? covale31 B C MSE 165 B MSE 165 1_555 B N ALA 166 B ALA 166 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.317 ? covale ? covale32 B C GLN 203 B GLN 203 1_555 B N MSE 204 B MSE 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? covale ? covale33 B C MSE 204 B MSE 204 1_555 B N ILE 205 B ILE 205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale34 B C ASP 226 B ASP 226 1_555 B N MSE 227 B MSE 227 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale35 B C MSE 227 B MSE 227 1_555 B N ALA 228 B ALA 228 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.345 ? covale ? covale36 B C ARG 250 B ARG 250 1_555 B N MSE 251 B MSE 251 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.322 ? covale ? covale37 B C MSE 251 B MSE 251 1_555 B N VAL 252 B VAL 252 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.34 ? covale ? covale38 B C ASP 268 B ASP 268 1_555 B N MSE 269 B MSE 269 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.323 ? covale ? covale39 B C MSE 269 B MSE 269 1_555 B N ARG 270 B ARG 270 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 290 n n S O2 SO4 doub 291 n n S O3 SO4 sing 292 n n S O4 SO4 sing 293 n n # _atom_sites.entry_id 4DLL _atom_sites.fract_transf_matrix[1][1] 0.025083 _atom_sites.fract_transf_matrix[1][2] 0.004964 _atom_sites.fract_transf_matrix[1][3] 0.00261 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.021685 _atom_sites.fract_transf_matrix[2][3] 0.001228 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01298 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 SO4 A 1 401 2 SO4 SO4 . D 2 SO4 B 1 401 1 SO4 SO4 . E 3 HOH A 1 501 1 HOH HOH . E 3 HOH A 2 502 2 HOH HOH . E 3 HOH A 3 503 18 HOH HOH . E 3 HOH A 4 504 33 HOH HOH . E 3 HOH A 5 505 35 HOH HOH . E 3 HOH A 6 506 38 HOH HOH . E 3 HOH A 7 507 39 HOH HOH . E 3 HOH A 8 508 40 HOH HOH . E 3 HOH A 9 509 41 HOH HOH . E 3 HOH A 10 510 42 HOH HOH . E 3 HOH A 11 511 43 HOH HOH . E 3 HOH A 12 512 45 HOH HOH . E 3 HOH A 13 513 46 HOH HOH . E 3 HOH A 14 514 52 HOH HOH . E 3 HOH A 15 515 53 HOH HOH . E 3 HOH A 16 516 55 HOH HOH . E 3 HOH A 17 517 60 HOH HOH . E 3 HOH A 18 518 62 HOH HOH . E 3 HOH A 19 519 66 HOH HOH . E 3 HOH A 20 520 68 HOH HOH . E 3 HOH A 21 521 70 HOH HOH . E 3 HOH A 22 522 81 HOH HOH . E 3 HOH A 23 523 82 HOH HOH . E 3 HOH A 24 524 84 HOH HOH . E 3 HOH A 25 525 85 HOH HOH . E 3 HOH A 26 526 86 HOH HOH . E 3 HOH A 27 527 88 HOH HOH . E 3 HOH A 28 528 98 HOH HOH . E 3 HOH A 29 529 99 HOH HOH . E 3 HOH A 30 530 100 HOH HOH . E 3 HOH A 31 531 111 HOH HOH . E 3 HOH A 32 532 113 HOH HOH . E 3 HOH A 33 533 115 HOH HOH . E 3 HOH A 34 534 116 HOH HOH . E 3 HOH A 35 535 118 HOH HOH . E 3 HOH A 36 536 119 HOH HOH . E 3 HOH A 37 537 134 HOH HOH . E 3 HOH A 38 538 136 HOH HOH . E 3 HOH A 39 539 139 HOH HOH . E 3 HOH A 40 540 142 HOH HOH . E 3 HOH A 41 541 144 HOH HOH . E 3 HOH A 42 542 148 HOH HOH . E 3 HOH A 43 543 149 HOH HOH . E 3 HOH A 44 544 150 HOH HOH . E 3 HOH A 45 545 151 HOH HOH . E 3 HOH A 46 546 152 HOH HOH . E 3 HOH A 47 547 154 HOH HOH . E 3 HOH A 48 548 157 HOH HOH . E 3 HOH A 49 549 158 HOH HOH . E 3 HOH A 50 550 160 HOH HOH . E 3 HOH A 51 551 162 HOH HOH . E 3 HOH A 52 552 164 HOH HOH . E 3 HOH A 53 553 166 HOH HOH . E 3 HOH A 54 554 172 HOH HOH . E 3 HOH A 55 555 177 HOH HOH . E 3 HOH A 56 556 181 HOH HOH . E 3 HOH A 57 557 183 HOH HOH . E 3 HOH A 58 558 184 HOH HOH . E 3 HOH A 59 559 185 HOH HOH . F 3 HOH B 1 501 4 HOH HOH . F 3 HOH B 2 502 6 HOH HOH . F 3 HOH B 3 503 8 HOH HOH . F 3 HOH B 4 504 11 HOH HOH . F 3 HOH B 5 505 14 HOH HOH . F 3 HOH B 6 506 19 HOH HOH . F 3 HOH B 7 507 23 HOH HOH . F 3 HOH B 8 508 25 HOH HOH . F 3 HOH B 9 509 26 HOH HOH . F 3 HOH B 10 510 27 HOH HOH . F 3 HOH B 11 511 30 HOH HOH . F 3 HOH B 12 512 32 HOH HOH . F 3 HOH B 13 513 44 HOH HOH . F 3 HOH B 14 514 48 HOH HOH . F 3 HOH B 15 515 50 HOH HOH . F 3 HOH B 16 516 51 HOH HOH . F 3 HOH B 17 517 59 HOH HOH . F 3 HOH B 18 518 61 HOH HOH . F 3 HOH B 19 519 64 HOH HOH . F 3 HOH B 20 520 65 HOH HOH . F 3 HOH B 21 521 72 HOH HOH . F 3 HOH B 22 522 78 HOH HOH . F 3 HOH B 23 523 83 HOH HOH . F 3 HOH B 24 524 87 HOH HOH . F 3 HOH B 25 525 89 HOH HOH . F 3 HOH B 26 526 92 HOH HOH . F 3 HOH B 27 527 93 HOH HOH . F 3 HOH B 28 528 95 HOH HOH . F 3 HOH B 29 529 109 HOH HOH . F 3 HOH B 30 530 110 HOH HOH . F 3 HOH B 31 531 112 HOH HOH . F 3 HOH B 32 532 114 HOH HOH . F 3 HOH B 33 533 117 HOH HOH . F 3 HOH B 34 534 120 HOH HOH . F 3 HOH B 35 535 124 HOH HOH . F 3 HOH B 36 536 129 HOH HOH . F 3 HOH B 37 537 130 HOH HOH . F 3 HOH B 38 538 132 HOH HOH . F 3 HOH B 39 539 137 HOH HOH . F 3 HOH B 40 540 138 HOH HOH . F 3 HOH B 41 541 140 HOH HOH . F 3 HOH B 42 542 143 HOH HOH . F 3 HOH B 43 543 145 HOH HOH . F 3 HOH B 44 544 146 HOH HOH . F 3 HOH B 45 545 147 HOH HOH . F 3 HOH B 46 546 155 HOH HOH . F 3 HOH B 47 547 156 HOH HOH . F 3 HOH B 48 548 159 HOH HOH . F 3 HOH B 49 549 161 HOH HOH . F 3 HOH B 50 550 163 HOH HOH . F 3 HOH B 51 551 165 HOH HOH . F 3 HOH B 52 552 169 HOH HOH . F 3 HOH B 53 553 171 HOH HOH . F 3 HOH B 54 554 173 HOH HOH . F 3 HOH B 55 555 176 HOH HOH . F 3 HOH B 56 556 178 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . D 2 22.332 51.769 -15.052 1 53.2 ? S SO4 401 B 1 HETATM 2 O O1 SO4 . . . D 2 22.512 52.099 -13.641 1 52.49 ? O1 SO4 401 B 1 HETATM 3 O O2 SO4 . . . D 2 23.524 51.108 -15.551 1 56.31 ? O2 SO4 401 B 1 HETATM 4 O O3 SO4 . . . D 2 21.22 50.852 -15.196 1 52.47 ? O3 SO4 401 B 1 HETATM 5 O O4 SO4 . . . D 2 22.13 52.975 -15.832 1 53.19 ? O4 SO4 401 B 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 19 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 257 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 5 #