data_4DM6
#
_model_server_result.job_id            W6xBq_Z9rrQZOTc5QCa8DQ 
_model_server_result.datetime_utc      '2024-11-26 05:30:51' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4dm6 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":501}' 
#
_entry.id    4DM6 
#
_exptl.entry_id    4DM6 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              348.478 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '4-[(1E)-2-(5,5,8,8-TETRAMETHYL-5,6,7,8-TETRAHYDRONAPHTHALEN-2-YL)PROP-1-ENYL]BENZOIC ACID' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            4DM6 
_cell.length_a            58.09 
_cell.length_b            84.06 
_cell.length_c            102.14 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4DM6 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,E,G 1 1 
B,D,F,H,I 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 E N N 
? 3 F N N 
#
_chem_comp.formula           'C24 H28 O2' 
_chem_comp.formula_weight    348.478 
_chem_comp.id                TTB 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '4-[(1E)-2-(5,5,8,8-TETRAMETHYL-5,6,7,8-TETRAHYDRONAPHTHALEN-2-YL)PROP-1-ENYL]BENZOIC ACID' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     TTNPB 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C C2 TTB sing 334 n n 
C H1 TTB sing 335 n n 
C H2 TTB sing 336 n n 
C H3A TTB sing 337 n n 
C2 C3 TTB doub 338 e n 
C2 C11 TTB sing 339 n n 
C3 C4 TTB sing 340 n n 
C3 H3 TTB sing 341 n n 
C4 C5 TTB doub 342 n y 
C4 C10 TTB sing 343 n y 
C5 C6 TTB sing 344 n y 
C5 H5 TTB sing 345 n n 
C6 C7 TTB doub 346 n y 
C6 H6 TTB sing 347 n n 
C7 C8 TTB sing 348 n n 
C7 C9 TTB sing 349 n y 
C8 O TTB sing 350 n n 
C8 O1 TTB doub 351 n n 
O HO TTB sing 352 n n 
C9 C10 TTB doub 353 n y 
C9 H9 TTB sing 354 n n 
C10 H10 TTB sing 355 n n 
C11 C12 TTB doub 356 n y 
C11 C16 TTB sing 357 n y 
C12 C13 TTB sing 358 n y 
C12 H12 TTB sing 359 n n 
C13 C14 TTB doub 360 n y 
C13 H13 TTB sing 361 n n 
C14 C15 TTB sing 362 n y 
C14 C22 TTB sing 363 n n 
C15 C16 TTB doub 364 n y 
C15 C17 TTB sing 365 n n 
C16 H16 TTB sing 366 n n 
C17 C18 TTB sing 367 n n 
C17 C19 TTB sing 368 n n 
C17 C20 TTB sing 369 n n 
C18 H181 TTB sing 370 n n 
C18 H182 TTB sing 371 n n 
C18 H183 TTB sing 372 n n 
C19 H191 TTB sing 373 n n 
C19 H192 TTB sing 374 n n 
C19 H193 TTB sing 375 n n 
C20 C21 TTB sing 376 n n 
C20 H201 TTB sing 377 n n 
C20 H202 TTB sing 378 n n 
C21 C22 TTB sing 379 n n 
C21 H211 TTB sing 380 n n 
C21 H212 TTB sing 381 n n 
C22 C23 TTB sing 382 n n 
C22 C24 TTB sing 383 n n 
C23 H231 TTB sing 384 n n 
C23 H232 TTB sing 385 n n 
C23 H233 TTB sing 386 n n 
C24 H241 TTB sing 387 n n 
C24 H242 TTB sing 388 n n 
C24 H243 TTB sing 389 n n 
#
_atom_sites.entry_id                     4DM6 
_atom_sites.fract_transf_matrix[1][1]    0.017215 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011896 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.00979 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 3 TTB A 1 501 1 TTB TTN . 
F 3 TTB B 1 1501 2 TTB TTN . 
G 4 HOH A 1 601 16 HOH TIP . 
G 4 HOH A 2 602 18 HOH TIP . 
G 4 HOH A 3 603 28 HOH TIP . 
G 4 HOH A 4 604 34 HOH TIP . 
G 4 HOH A 5 605 38 HOH TIP . 
G 4 HOH A 6 606 43 HOH TIP . 
G 4 HOH A 7 607 45 HOH TIP . 
G 4 HOH A 8 608 46 HOH TIP . 
G 4 HOH A 9 609 49 HOH TIP . 
G 4 HOH A 10 610 50 HOH TIP . 
G 4 HOH A 11 611 55 HOH TIP . 
G 4 HOH A 12 612 56 HOH TIP . 
G 4 HOH A 13 613 58 HOH TIP . 
G 4 HOH A 14 614 60 HOH TIP . 
G 4 HOH A 15 615 67 HOH TIP . 
G 4 HOH A 16 616 68 HOH TIP . 
G 4 HOH A 17 617 69 HOH TIP . 
G 4 HOH A 18 618 70 HOH TIP . 
G 4 HOH A 19 619 74 HOH TIP . 
G 4 HOH A 20 620 76 HOH TIP . 
G 4 HOH A 21 621 79 HOH TIP . 
G 4 HOH A 22 622 81 HOH TIP . 
G 4 HOH A 23 623 85 HOH TIP . 
G 4 HOH A 24 624 86 HOH TIP . 
G 4 HOH A 25 625 87 HOH TIP . 
G 4 HOH A 26 626 88 HOH TIP . 
G 4 HOH A 27 627 94 HOH TIP . 
G 4 HOH A 28 628 107 HOH TIP . 
G 4 HOH A 29 629 125 HOH TIP . 
G 4 HOH A 30 630 145 HOH TIP . 
G 4 HOH A 31 631 149 HOH TIP . 
G 4 HOH A 32 632 150 HOH TIP . 
G 4 HOH A 33 633 154 HOH TIP . 
G 4 HOH A 34 634 155 HOH TIP . 
G 4 HOH A 35 635 156 HOH TIP . 
G 4 HOH A 36 636 158 HOH TIP . 
G 4 HOH A 37 637 167 HOH TIP . 
G 4 HOH A 38 638 169 HOH TIP . 
G 4 HOH A 39 639 170 HOH TIP . 
G 4 HOH A 40 640 171 HOH TIP . 
G 4 HOH A 41 641 174 HOH TIP . 
G 4 HOH A 42 642 175 HOH TIP . 
G 4 HOH A 43 643 176 HOH TIP . 
G 4 HOH A 44 644 180 HOH TIP . 
G 4 HOH A 45 645 182 HOH TIP . 
G 4 HOH A 46 646 183 HOH TIP . 
G 4 HOH A 47 647 184 HOH TIP . 
G 4 HOH A 48 648 185 HOH TIP . 
G 4 HOH A 49 649 186 HOH TIP . 
G 4 HOH A 50 650 187 HOH TIP . 
G 4 HOH A 51 651 188 HOH TIP . 
G 4 HOH A 52 652 189 HOH TIP . 
G 4 HOH A 53 653 193 HOH TIP . 
G 4 HOH A 54 654 194 HOH TIP . 
G 4 HOH A 55 655 196 HOH TIP . 
G 4 HOH A 56 656 197 HOH TIP . 
G 4 HOH A 57 657 198 HOH TIP . 
G 4 HOH A 58 658 200 HOH TIP . 
G 4 HOH A 59 659 201 HOH TIP . 
G 4 HOH A 60 660 202 HOH TIP . 
G 4 HOH A 61 661 203 HOH TIP . 
G 4 HOH A 62 662 205 HOH TIP . 
G 4 HOH A 63 663 208 HOH TIP . 
G 4 HOH A 64 664 210 HOH TIP . 
G 4 HOH A 65 665 211 HOH TIP . 
G 4 HOH A 66 666 212 HOH TIP . 
G 4 HOH A 67 667 217 HOH TIP . 
G 4 HOH A 68 668 218 HOH TIP . 
G 4 HOH A 69 669 219 HOH TIP . 
G 4 HOH A 70 670 220 HOH TIP . 
G 4 HOH A 71 671 222 HOH TIP . 
G 4 HOH A 72 672 226 HOH TIP . 
G 4 HOH A 73 673 227 HOH TIP . 
H 4 HOH B 1 1601 1 HOH TIP . 
H 4 HOH B 2 1602 2 HOH TIP . 
H 4 HOH B 3 1603 3 HOH TIP . 
H 4 HOH B 4 1604 4 HOH TIP . 
H 4 HOH B 5 1605 5 HOH TIP . 
H 4 HOH B 6 1606 6 HOH TIP . 
H 4 HOH B 7 1607 7 HOH TIP . 
H 4 HOH B 8 1608 8 HOH TIP . 
H 4 HOH B 9 1609 9 HOH TIP . 
H 4 HOH B 10 1610 10 HOH TIP . 
H 4 HOH B 11 1611 11 HOH TIP . 
H 4 HOH B 12 1612 12 HOH TIP . 
H 4 HOH B 13 1613 14 HOH TIP . 
H 4 HOH B 14 1614 15 HOH TIP . 
H 4 HOH B 15 1615 17 HOH TIP . 
H 4 HOH B 16 1616 19 HOH TIP . 
H 4 HOH B 17 1617 20 HOH TIP . 
H 4 HOH B 18 1618 21 HOH TIP . 
H 4 HOH B 19 1619 23 HOH TIP . 
H 4 HOH B 20 1620 24 HOH TIP . 
H 4 HOH B 21 1621 25 HOH TIP . 
H 4 HOH B 22 1622 27 HOH TIP . 
H 4 HOH B 23 1623 29 HOH TIP . 
H 4 HOH B 24 1624 30 HOH TIP . 
H 4 HOH B 25 1625 31 HOH TIP . 
H 4 HOH B 26 1626 33 HOH TIP . 
H 4 HOH B 27 1627 35 HOH TIP . 
H 4 HOH B 28 1628 36 HOH TIP . 
H 4 HOH B 29 1629 37 HOH TIP . 
H 4 HOH B 30 1630 39 HOH TIP . 
H 4 HOH B 31 1631 40 HOH TIP . 
H 4 HOH B 32 1632 41 HOH TIP . 
H 4 HOH B 33 1633 42 HOH TIP . 
H 4 HOH B 34 1634 47 HOH TIP . 
H 4 HOH B 35 1635 48 HOH TIP . 
H 4 HOH B 36 1636 51 HOH TIP . 
H 4 HOH B 37 1637 54 HOH TIP . 
H 4 HOH B 38 1638 57 HOH TIP . 
H 4 HOH B 39 1639 61 HOH TIP . 
H 4 HOH B 40 1640 62 HOH TIP . 
H 4 HOH B 41 1641 63 HOH TIP . 
H 4 HOH B 42 1642 65 HOH TIP . 
H 4 HOH B 43 1643 66 HOH TIP . 
H 4 HOH B 44 1644 71 HOH TIP . 
H 4 HOH B 45 1645 72 HOH TIP . 
H 4 HOH B 46 1646 73 HOH TIP . 
H 4 HOH B 47 1647 75 HOH TIP . 
H 4 HOH B 48 1648 78 HOH TIP . 
H 4 HOH B 49 1649 80 HOH TIP . 
H 4 HOH B 50 1650 82 HOH TIP . 
H 4 HOH B 51 1651 84 HOH TIP . 
H 4 HOH B 52 1652 90 HOH TIP . 
H 4 HOH B 53 1653 91 HOH TIP . 
H 4 HOH B 54 1654 93 HOH TIP . 
H 4 HOH B 55 1655 95 HOH TIP . 
H 4 HOH B 56 1656 96 HOH TIP . 
H 4 HOH B 57 1657 98 HOH TIP . 
H 4 HOH B 58 1658 101 HOH TIP . 
H 4 HOH B 59 1659 102 HOH TIP . 
H 4 HOH B 60 1660 103 HOH TIP . 
H 4 HOH B 61 1661 105 HOH TIP . 
H 4 HOH B 62 1662 106 HOH TIP . 
H 4 HOH B 63 1663 110 HOH TIP . 
H 4 HOH B 64 1664 112 HOH TIP . 
H 4 HOH B 65 1665 115 HOH TIP . 
H 4 HOH B 66 1666 118 HOH TIP . 
H 4 HOH B 67 1667 119 HOH TIP . 
H 4 HOH B 68 1668 122 HOH TIP . 
H 4 HOH B 69 1669 124 HOH TIP . 
H 4 HOH B 70 1670 126 HOH TIP . 
H 4 HOH B 71 1671 129 HOH TIP . 
H 4 HOH B 72 1672 130 HOH TIP . 
H 4 HOH B 73 1673 132 HOH TIP . 
H 4 HOH B 74 1674 133 HOH TIP . 
H 4 HOH B 75 1675 134 HOH TIP . 
H 4 HOH B 76 1676 135 HOH TIP . 
H 4 HOH B 77 1677 136 HOH TIP . 
H 4 HOH B 78 1678 137 HOH TIP . 
H 4 HOH B 79 1679 138 HOH TIP . 
H 4 HOH B 80 1680 139 HOH TIP . 
H 4 HOH B 81 1681 140 HOH TIP . 
H 4 HOH B 82 1682 141 HOH TIP . 
H 4 HOH B 83 1683 143 HOH TIP . 
H 4 HOH B 84 1684 144 HOH TIP . 
H 4 HOH B 85 1685 151 HOH TIP . 
H 4 HOH B 86 1686 157 HOH TIP . 
H 4 HOH B 87 1687 160 HOH TIP . 
H 4 HOH B 88 1688 161 HOH TIP . 
H 4 HOH B 89 1689 162 HOH TIP . 
H 4 HOH B 90 1690 163 HOH TIP . 
H 4 HOH B 91 1691 164 HOH TIP . 
H 4 HOH B 92 1692 165 HOH TIP . 
H 4 HOH B 93 1693 204 HOH TIP . 
H 4 HOH B 94 1694 209 HOH TIP . 
H 4 HOH B 95 1695 213 HOH TIP . 
H 4 HOH B 96 1696 214 HOH TIP . 
H 4 HOH B 97 1697 215 HOH TIP . 
H 4 HOH B 98 1698 216 HOH TIP . 
H 4 HOH B 99 1699 221 HOH TIP . 
H 4 HOH B 100 1700 223 HOH TIP . 
H 4 HOH B 101 1701 224 HOH TIP . 
H 4 HOH B 102 1702 225 HOH TIP . 
H 4 HOH B 103 1703 228 HOH TIP . 
I 4 HOH F 1 901 59 HOH TIP . 
I 4 HOH F 2 902 229 HOH TIP . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C TTB . . . E 3 13.116 11.652 23.316 1 32.32 ? C TTB 501 A 1 
HETATM 2 C C2 TTB . . . E 3 12.615 12.079 21.845 1 30.22 ? C2 TTB 501 A 1 
HETATM 3 C C3 TTB . . . E 3 13.267 11.981 20.643 1 33.75 ? C3 TTB 501 A 1 
HETATM 4 C C4 TTB . . . E 3 14.38 11.576 20.168 1 32.95 ? C4 TTB 501 A 1 
HETATM 5 C C5 TTB . . . E 3 14.761 12.192 18.815 1 36.04 ? C5 TTB 501 A 1 
HETATM 6 C C6 TTB . . . E 3 16.005 11.815 18.136 1 33.81 ? C6 TTB 501 A 1 
HETATM 7 C C7 TTB . . . E 3 16.952 10.786 18.784 1 32.59 ? C7 TTB 501 A 1 
HETATM 8 C C8 TTB . . . E 3 18.182 10.395 18.153 1 31.52 ? C8 TTB 501 A 1 
HETATM 9 O O TTB . . . E 3 18.48 10.86 17.13 1 32.36 ? O TTB 501 A 1 
HETATM 10 O O1 TTB . . . E 3 18.883 9.593 18.69 1 34.24 ? O1 TTB 501 A 1 
HETATM 11 C C9 TTB . . . E 3 16.533 10.155 20.19 1 32.89 ? C9 TTB 501 A 1 
HETATM 12 C C10 TTB . . . E 3 15.358 10.522 20.81 1 34.79 ? C10 TTB 501 A 1 
HETATM 13 C C11 TTB . . . E 3 11.248 12.677 21.733 1 34.61 ? C11 TTB 501 A 1 
HETATM 14 C C12 TTB . . . E 3 10.354 12.521 20.314 1 36.54 ? C12 TTB 501 A 1 
HETATM 15 C C13 TTB . . . E 3 9.082 13.084 20.184 1 42.3 ? C13 TTB 501 A 1 
HETATM 16 C C14 TTB . . . E 3 8.421 13.878 21.322 1 41.22 ? C14 TTB 501 A 1 
HETATM 17 C C15 TTB . . . E 3 9.243 14.06 22.734 1 41.72 ? C15 TTB 501 A 1 
HETATM 18 C C16 TTB . . . E 3 10.635 13.433 22.843 1 37.76 ? C16 TTB 501 A 1 
HETATM 19 C C17 TTB . . . E 3 8.606 14.874 23.965 1 42.56 ? C17 TTB 501 A 1 
HETATM 20 C C18 TTB . . . E 3 8.939 14.144 25.37 1 44.55 ? C18 TTB 501 A 1 
HETATM 21 C C19 TTB . . . E 3 9.168 16.291 24.04 1 43.89 ? C19 TTB 501 A 1 
HETATM 22 C C20 TTB . . . E 3 6.971 14.959 23.868 1 42.6 ? C20 TTB 501 A 1 
HETATM 23 C C21 TTB . . . E 3 6.359 15.344 22.393 1 42.55 ? C21 TTB 501 A 1 
HETATM 24 C C22 TTB . . . E 3 6.951 14.502 21.099 1 43.53 ? C22 TTB 501 A 1 
HETATM 25 C C23 TTB . . . E 3 6.937 15.518 19.818 1 42.54 ? C23 TTB 501 A 1 
HETATM 26 C C24 TTB . . . E 3 5.933 13.309 20.83 1 43.7 ? C24 TTB 501 A 1 
#
_model_server_stats.io_time_ms              35 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    8 
_model_server_stats.query_time_ms           313 
_model_server_stats.encode_time_ms          9 
_model_server_stats.element_count           26 
#