data_4DMW # _model_server_result.job_id xQtIIEAtkZv9g2K0X7HMSQ _model_server_result.datetime_utc '2025-03-04 08:38:37' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4dmw # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":601}' # _entry.id 4DMW # _exptl.entry_id 4DMW _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 54.938 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MANGANESE (II) ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4DMW _cell.length_a 66.66 _cell.length_b 156.73 _cell.length_c 65.75 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4DMW _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD2 ASP 302 A ASP 287 1_555 B MN MN . A MN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.642 ? metalc ? metalc2 B MN MN . A MN 601 1_555 C O2B UDP . A UDP 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.583 ? metalc ? metalc3 B MN MN . A MN 601 1_555 C O2A UDP . A UDP 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.632 ? metalc ? metalc4 B MN MN . A MN 601 1_555 D O HOH . A HOH 763 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.696 ? # _chem_comp.formula 'Mn 2' _chem_comp.formula_weight 54.938 _chem_comp.id MN _chem_comp.mon_nstd_flag . _chem_comp.name 'MANGANESE (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4DMW _atom_sites.fract_transf_matrix[1][1] 0.015002 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00638 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015209 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MN A 1 601 601 MN MN . C 3 UDP A 1 602 602 UDP UDP . D 4 HOH A 1 701 701 HOH HOH . D 4 HOH A 2 702 702 HOH HOH . D 4 HOH A 3 703 703 HOH HOH . D 4 HOH A 4 704 704 HOH HOH . D 4 HOH A 5 705 705 HOH HOH . D 4 HOH A 6 706 706 HOH HOH . D 4 HOH A 7 707 707 HOH HOH . D 4 HOH A 8 708 708 HOH HOH . D 4 HOH A 9 709 709 HOH HOH . D 4 HOH A 10 710 710 HOH HOH . D 4 HOH A 11 711 711 HOH HOH . D 4 HOH A 12 712 712 HOH HOH . D 4 HOH A 13 713 713 HOH HOH . D 4 HOH A 14 714 714 HOH HOH . D 4 HOH A 15 715 715 HOH HOH . D 4 HOH A 16 716 716 HOH HOH . D 4 HOH A 17 717 717 HOH HOH . D 4 HOH A 18 718 718 HOH HOH . D 4 HOH A 19 719 719 HOH HOH . D 4 HOH A 20 720 720 HOH HOH . D 4 HOH A 21 721 721 HOH HOH . D 4 HOH A 22 722 722 HOH HOH . D 4 HOH A 23 723 723 HOH HOH . D 4 HOH A 24 724 724 HOH HOH . D 4 HOH A 25 725 725 HOH HOH . D 4 HOH A 26 726 726 HOH HOH . D 4 HOH A 27 727 727 HOH HOH . D 4 HOH A 28 728 728 HOH HOH . D 4 HOH A 29 729 729 HOH HOH . D 4 HOH A 30 730 730 HOH HOH . D 4 HOH A 31 731 731 HOH HOH . D 4 HOH A 32 732 732 HOH HOH . D 4 HOH A 33 733 733 HOH HOH . D 4 HOH A 34 734 734 HOH HOH . D 4 HOH A 35 735 735 HOH HOH . D 4 HOH A 36 736 736 HOH HOH . D 4 HOH A 37 737 737 HOH HOH . D 4 HOH A 38 738 738 HOH HOH . D 4 HOH A 39 739 739 HOH HOH . D 4 HOH A 40 740 740 HOH HOH . D 4 HOH A 41 741 741 HOH HOH . D 4 HOH A 42 742 742 HOH HOH . D 4 HOH A 43 743 743 HOH HOH . D 4 HOH A 44 744 744 HOH HOH . D 4 HOH A 45 745 745 HOH HOH . D 4 HOH A 46 746 746 HOH HOH . D 4 HOH A 47 747 747 HOH HOH . D 4 HOH A 48 748 748 HOH HOH . D 4 HOH A 49 749 749 HOH HOH . D 4 HOH A 50 750 750 HOH HOH . D 4 HOH A 51 751 751 HOH HOH . D 4 HOH A 52 752 752 HOH HOH . D 4 HOH A 53 753 753 HOH HOH . D 4 HOH A 54 754 754 HOH HOH . D 4 HOH A 55 755 755 HOH HOH . D 4 HOH A 56 756 756 HOH HOH . D 4 HOH A 57 757 757 HOH HOH . D 4 HOH A 58 758 758 HOH HOH . D 4 HOH A 59 759 759 HOH HOH . D 4 HOH A 60 760 760 HOH HOH . D 4 HOH A 61 761 761 HOH HOH . D 4 HOH A 62 762 762 HOH HOH . D 4 HOH A 63 763 763 HOH HOH . D 4 HOH A 64 764 764 HOH HOH . D 4 HOH A 65 765 765 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MN _atom_site.label_atom_id MN _atom_site.label_comp_id MN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x 14.967 _atom_site.Cartn_y 26.401 _atom_site.Cartn_z 17.569 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 61.13 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MN _atom_site.auth_comp_id MN _atom_site.auth_seq_id 601 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 308 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #