data_4DN0 # _model_server_result.job_id wwqvUcOIrp7IAIYs5k864g _model_server_result.datetime_utc '2024-12-21 13:47:39' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4dn0 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":505}' # _entry.id 4DN0 # _exptl.entry_id 4DN0 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 22.99 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SODIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4DN0 _cell.length_a 41.776 _cell.length_b 82.043 _cell.length_c 91.808 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4DN0 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 E N N ? 4 F N N # _struct_conn.conn_type_id metalc _struct_conn.details ? _struct_conn.id metalc1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id OE1 _struct_conn.ptnr1_label_comp_id GLU _struct_conn.ptnr1_label_seq_id 214 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id GLU _struct_conn.ptnr1_auth_seq_id 348 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id E _struct_conn.ptnr2_label_atom_id NA _struct_conn.ptnr2_label_comp_id NA _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id NA _struct_conn.ptnr2_auth_seq_id 504 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.828 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'Na 1' _chem_comp.formula_weight 22.99 _chem_comp.id NA _chem_comp.mon_nstd_flag . _chem_comp.name 'SODIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4DN0 _atom_sites.fract_transf_matrix[1][1] 0.023937 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012189 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010892 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 C2E A 1 501 1 C2E C2E . C 2 C2E A 1 502 2 C2E C2E . D 3 SO4 A 1 503 1 SO4 SO4 . E 4 NA A 1 504 1 NA NA . F 4 NA A 1 505 2 NA NA . G 5 HOH A 1 601 1 HOH HOH . G 5 HOH A 2 602 2 HOH HOH . G 5 HOH A 3 603 3 HOH HOH . G 5 HOH A 4 604 4 HOH HOH . G 5 HOH A 5 605 5 HOH HOH . G 5 HOH A 6 606 6 HOH HOH . G 5 HOH A 7 607 7 HOH HOH . G 5 HOH A 8 608 8 HOH HOH . G 5 HOH A 9 609 9 HOH HOH . G 5 HOH A 10 610 10 HOH HOH . G 5 HOH A 11 611 11 HOH HOH . G 5 HOH A 12 612 12 HOH HOH . G 5 HOH A 13 613 13 HOH HOH . G 5 HOH A 14 614 14 HOH HOH . G 5 HOH A 15 615 15 HOH HOH . G 5 HOH A 16 616 16 HOH HOH . G 5 HOH A 17 617 17 HOH HOH . G 5 HOH A 18 618 18 HOH HOH . G 5 HOH A 19 619 19 HOH HOH . G 5 HOH A 20 620 20 HOH HOH . G 5 HOH A 21 621 21 HOH HOH . G 5 HOH A 22 622 22 HOH HOH . G 5 HOH A 23 623 23 HOH HOH . G 5 HOH A 24 624 24 HOH HOH . G 5 HOH A 25 625 25 HOH HOH . G 5 HOH A 26 626 26 HOH HOH . G 5 HOH A 27 627 27 HOH HOH . G 5 HOH A 28 628 28 HOH HOH . G 5 HOH A 29 629 29 HOH HOH . G 5 HOH A 30 630 30 HOH HOH . G 5 HOH A 31 631 31 HOH HOH . G 5 HOH A 32 632 32 HOH HOH . G 5 HOH A 33 633 33 HOH HOH . G 5 HOH A 34 634 34 HOH HOH . G 5 HOH A 35 635 35 HOH HOH . G 5 HOH A 36 636 36 HOH HOH . G 5 HOH A 37 637 37 HOH HOH . G 5 HOH A 38 638 38 HOH HOH . G 5 HOH A 39 639 39 HOH HOH . G 5 HOH A 40 640 40 HOH HOH . G 5 HOH A 41 641 41 HOH HOH . G 5 HOH A 42 642 42 HOH HOH . G 5 HOH A 43 643 43 HOH HOH . G 5 HOH A 44 644 44 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol NA _atom_site.label_atom_id NA _atom_site.label_comp_id NA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id F _atom_site.label_entity_id 4 _atom_site.Cartn_x 15.259 _atom_site.Cartn_y 14.34 _atom_site.Cartn_z 25.396 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 86.47 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id NA _atom_site.auth_comp_id NA _atom_site.auth_seq_id 505 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 42 _model_server_stats.parse_time_ms 30 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 1324 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #