data_4DO8 # _model_server_result.job_id 9RUhJU7ScgTrBZZNByfrUA _model_server_result.datetime_utc '2025-02-19 18:00:57' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4do8 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":101}' # _entry.id 4DO8 # _exptl.entry_id 4DO8 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 58.082 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'THIOCYANATE ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 108.01 _cell.angle_gamma 90 _cell.entry_id 4DO8 _cell.length_a 32.28 _cell.length_b 116.04 _cell.length_c 46.19 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4DO8 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 PISA tetrameric 4 software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E 1 1 B,D,F 2 1 A,B,C,D,E,F 3 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -x,y,-z -1 0 0 0 1 0 0 0 -1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 3 A CYS 3 1_555 A SG CYS 24 A CYS 24 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.091 ? disulf ? disulf2 A SG CYS 17 A CYS 17 1_555 A SG CYS 42 A CYS 42 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.112 ? disulf ? disulf3 A SG CYS 46 A CYS 46 1_555 A SG CYS 58 A CYS 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.094 ? disulf ? disulf4 A SG CYS 59 A CYS 59 1_555 A SG CYS 64 A CYS 64 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf5 B SG CYS 3 B CYS 3 1_555 B SG CYS 24 B CYS 24 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.046 ? disulf ? disulf6 B SG CYS 17 B CYS 17 1_555 B SG CYS 42 B CYS 42 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.085 ? disulf ? disulf7 B SG CYS 46 B CYS 46 1_555 B SG CYS 58 B CYS 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.068 ? disulf ? disulf8 B SG CYS 59 B CYS 59 1_555 B SG CYS 64 B CYS 64 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? # _chem_comp.formula 'C N S -1' _chem_comp.formula_weight 58.082 _chem_comp.id SCN _chem_comp.mon_nstd_flag . _chem_comp.name 'THIOCYANATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S C SCN sing 243 n n C N SCN trip 244 n n # _atom_sites.entry_id 4DO8 _atom_sites.fract_transf_matrix[1][1] 0.030979 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.010072 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008618 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.022765 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 SCN A 1 101 1 SCN SCN . D 3 ACT B 1 101 2 ACT ACT . E 4 HOH A 1 201 2 HOH HOH . E 4 HOH A 2 202 3 HOH HOH . E 4 HOH A 3 203 4 HOH HOH . E 4 HOH A 4 204 5 HOH HOH . E 4 HOH A 5 205 7 HOH HOH . E 4 HOH A 6 206 8 HOH HOH . E 4 HOH A 7 207 9 HOH HOH . E 4 HOH A 8 208 10 HOH HOH . E 4 HOH A 9 209 11 HOH HOH . E 4 HOH A 10 210 12 HOH HOH . E 4 HOH A 11 211 13 HOH HOH . E 4 HOH A 12 212 14 HOH HOH . E 4 HOH A 13 213 15 HOH HOH . E 4 HOH A 14 214 16 HOH HOH . E 4 HOH A 15 215 17 HOH HOH . E 4 HOH A 16 216 18 HOH HOH . E 4 HOH A 17 217 19 HOH HOH . E 4 HOH A 18 218 20 HOH HOH . E 4 HOH A 19 219 21 HOH HOH . E 4 HOH A 20 220 22 HOH HOH . E 4 HOH A 21 221 24 HOH HOH . E 4 HOH A 22 222 27 HOH HOH . E 4 HOH A 23 223 28 HOH HOH . E 4 HOH A 24 224 29 HOH HOH . E 4 HOH A 25 225 30 HOH HOH . E 4 HOH A 26 226 33 HOH HOH . E 4 HOH A 27 227 35 HOH HOH . E 4 HOH A 28 228 38 HOH HOH . E 4 HOH A 29 229 39 HOH HOH . E 4 HOH A 30 230 41 HOH HOH . E 4 HOH A 31 231 43 HOH HOH . E 4 HOH A 32 232 44 HOH HOH . E 4 HOH A 33 233 45 HOH HOH . E 4 HOH A 34 234 46 HOH HOH . E 4 HOH A 35 235 49 HOH HOH . E 4 HOH A 36 236 63 HOH HOH . E 4 HOH A 37 237 64 HOH HOH . E 4 HOH A 38 238 67 HOH HOH . E 4 HOH A 39 239 68 HOH HOH . E 4 HOH A 40 240 70 HOH HOH . E 4 HOH A 41 241 71 HOH HOH . E 4 HOH A 42 242 72 HOH HOH . E 4 HOH A 43 243 73 HOH HOH . E 4 HOH A 44 244 85 HOH HOH . E 4 HOH A 45 245 86 HOH HOH . E 4 HOH A 46 246 88 HOH HOH . E 4 HOH A 47 247 90 HOH HOH . E 4 HOH A 48 248 92 HOH HOH . E 4 HOH A 49 249 97 HOH HOH . E 4 HOH A 50 250 98 HOH HOH . E 4 HOH A 51 251 99 HOH HOH . E 4 HOH A 52 252 100 HOH HOH . E 4 HOH A 53 253 101 HOH HOH . E 4 HOH A 54 254 103 HOH HOH . E 4 HOH A 55 255 107 HOH HOH . E 4 HOH A 56 256 110 HOH HOH . E 4 HOH A 57 257 112 HOH HOH . E 4 HOH A 58 258 118 HOH HOH . E 4 HOH A 59 259 120 HOH HOH . E 4 HOH A 60 260 125 HOH HOH . E 4 HOH A 61 261 126 HOH HOH . E 4 HOH A 62 262 128 HOH HOH . F 4 HOH B 1 201 1 HOH HOH . F 4 HOH B 2 202 6 HOH HOH . F 4 HOH B 3 203 23 HOH HOH . F 4 HOH B 4 204 25 HOH HOH . F 4 HOH B 5 205 26 HOH HOH . F 4 HOH B 6 206 31 HOH HOH . F 4 HOH B 7 207 32 HOH HOH . F 4 HOH B 8 208 34 HOH HOH . F 4 HOH B 9 209 36 HOH HOH . F 4 HOH B 10 210 37 HOH HOH . F 4 HOH B 11 211 40 HOH HOH . F 4 HOH B 12 212 42 HOH HOH . F 4 HOH B 13 213 47 HOH HOH . F 4 HOH B 14 214 48 HOH HOH . F 4 HOH B 15 215 50 HOH HOH . F 4 HOH B 16 216 51 HOH HOH . F 4 HOH B 17 217 52 HOH HOH . F 4 HOH B 18 218 53 HOH HOH . F 4 HOH B 19 219 54 HOH HOH . F 4 HOH B 20 220 55 HOH HOH . F 4 HOH B 21 221 56 HOH HOH . F 4 HOH B 22 222 57 HOH HOH . F 4 HOH B 23 223 58 HOH HOH . F 4 HOH B 24 224 59 HOH HOH . F 4 HOH B 25 225 60 HOH HOH . F 4 HOH B 26 226 61 HOH HOH . F 4 HOH B 27 227 62 HOH HOH . F 4 HOH B 28 228 65 HOH HOH . F 4 HOH B 29 229 66 HOH HOH . F 4 HOH B 30 230 69 HOH HOH . F 4 HOH B 31 231 74 HOH HOH . F 4 HOH B 32 232 75 HOH HOH . F 4 HOH B 33 233 76 HOH HOH . F 4 HOH B 34 234 77 HOH HOH . F 4 HOH B 35 235 78 HOH HOH . F 4 HOH B 36 236 79 HOH HOH . F 4 HOH B 37 237 80 HOH HOH . F 4 HOH B 38 238 81 HOH HOH . F 4 HOH B 39 239 82 HOH HOH . F 4 HOH B 40 240 83 HOH HOH . F 4 HOH B 41 241 84 HOH HOH . F 4 HOH B 42 242 87 HOH HOH . F 4 HOH B 43 243 89 HOH HOH . F 4 HOH B 44 244 91 HOH HOH . F 4 HOH B 45 245 93 HOH HOH . F 4 HOH B 46 246 94 HOH HOH . F 4 HOH B 47 247 95 HOH HOH . F 4 HOH B 48 248 96 HOH HOH . F 4 HOH B 49 249 102 HOH HOH . F 4 HOH B 50 250 104 HOH HOH . F 4 HOH B 51 251 105 HOH HOH . F 4 HOH B 52 252 106 HOH HOH . F 4 HOH B 53 253 108 HOH HOH . F 4 HOH B 54 254 109 HOH HOH . F 4 HOH B 55 255 111 HOH HOH . F 4 HOH B 56 256 113 HOH HOH . F 4 HOH B 57 257 114 HOH HOH . F 4 HOH B 58 258 115 HOH HOH . F 4 HOH B 59 259 116 HOH HOH . F 4 HOH B 60 260 117 HOH HOH . F 4 HOH B 61 261 119 HOH HOH . F 4 HOH B 62 262 121 HOH HOH . F 4 HOH B 63 263 122 HOH HOH . F 4 HOH B 64 264 123 HOH HOH . F 4 HOH B 65 265 124 HOH HOH . F 4 HOH B 66 266 127 HOH HOH . F 4 HOH B 67 267 129 HOH HOH . F 4 HOH B 68 268 130 HOH HOH . F 4 HOH B 69 269 131 HOH HOH . F 4 HOH B 70 270 132 HOH HOH . F 4 HOH B 71 271 133 HOH HOH . F 4 HOH B 72 272 134 HOH HOH . F 4 HOH B 73 273 135 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SCN . . . C 2 5.814 24.481 2.512 1 26.07 ? S SCN 101 A 1 HETATM 2 C C SCN . . . C 2 4.571 23.221 2.76 1 29.38 ? C SCN 101 A 1 HETATM 3 N N SCN . . . C 2 3.759 22.454 2.996 1 18.84 ? N SCN 101 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 17 _model_server_stats.create_model_time_ms 16 _model_server_stats.query_time_ms 239 _model_server_stats.encode_time_ms 11 _model_server_stats.element_count 3 #