data_4DPW # _model_server_result.job_id ULLKh-Uyvtzbku6YK7-Jdg _model_server_result.datetime_utc '2025-04-10 04:23:22' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4dpw # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"V","auth_seq_id":404}' # _entry.id 4DPW # _exptl.entry_id 4DPW _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 46.025 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FORMIC ACID' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4DPW _cell.length_a 96.459 _cell.length_b 99.445 _cell.length_c 314.418 _cell.Z_PDB 32 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4DPW _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 ? monomeric 1 author_defined_assembly 3 ? monomeric 1 author_defined_assembly 4 ? monomeric 1 author_defined_assembly 5 ? monomeric 1 author_defined_assembly 6 ? monomeric 1 author_defined_assembly 7 ? monomeric 1 author_defined_assembly 8 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,I,J,K,DA 1 1 B,L,M,EA 2 1 C,N,O,FA 3 1 D,P,Q,R,GA 4 1 E,S,T,U,V,HA 5 1 F,W,X,IA 6 1 G,Y,Z,JA 7 1 H,AA,BA,CA,KA 8 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 K N N ? 4 R N N ? 4 V N N ? 4 CA N N # _chem_comp.formula 'C H2 O2' _chem_comp.formula_weight 46.025 _chem_comp.id FMT _chem_comp.mon_nstd_flag . _chem_comp.name 'FORMIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C O1 FMT doub 163 n n C O2 FMT sing 164 n n C H FMT sing 165 n n O2 HO2 FMT sing 166 n n # _atom_sites.entry_id 4DPW _atom_sites.fract_transf_matrix[1][1] 0.010367 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010056 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00318 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code I 2 AGS A 1 401 1012 AGS AGS . J 3 DP6 A 1 402 7 DP6 DRG . K 4 FMT A 1 403 3613 FMT FMT . L 2 AGS B 1 401 1010 AGS AGS . M 3 DP6 B 1 402 3 DP6 DRG . N 2 AGS C 1 401 1006 AGS AGS . O 3 DP6 C 1 402 5 DP6 DRG . P 2 AGS D 1 401 1013 AGS AGS . Q 3 DP6 D 1 402 4 DP6 DRG . R 4 FMT D 1 403 3613 FMT FMT . S 2 AGS E 1 401 1011 AGS AGS . T 3 DP6 E 1 402 2 DP6 DRG . U 5 GOL E 1 403 3968 GOL GOL . V 4 FMT E 1 404 3613 FMT FMT . W 2 AGS F 1 401 1009 AGS AGS . X 3 DP6 F 1 402 1 DP6 DRG . Y 2 AGS G 1 401 1007 AGS AGS . Z 3 DP6 G 1 402 6 DP6 DRG . AA 2 AGS H 1 401 1008 AGS AGS . BA 3 DP6 H 1 402 8 DP6 DRG . CA 4 FMT H 1 403 3613 FMT FMT . DA 6 HOH A 1 501 11 HOH HOH . DA 6 HOH A 2 502 20 HOH HOH . DA 6 HOH A 3 503 23 HOH HOH . DA 6 HOH A 4 504 32 HOH HOH . DA 6 HOH A 5 505 48 HOH HOH . DA 6 HOH A 6 506 51 HOH HOH . DA 6 HOH A 7 507 69 HOH HOH . DA 6 HOH A 8 508 74 HOH HOH . DA 6 HOH A 9 509 81 HOH HOH . DA 6 HOH A 10 510 85 HOH HOH . DA 6 HOH A 11 511 101 HOH HOH . DA 6 HOH A 12 512 120 HOH HOH . DA 6 HOH A 13 513 126 HOH HOH . DA 6 HOH A 14 514 132 HOH HOH . DA 6 HOH A 15 515 143 HOH HOH . DA 6 HOH A 16 516 176 HOH HOH . DA 6 HOH A 17 517 183 HOH HOH . DA 6 HOH A 18 518 216 HOH HOH . DA 6 HOH A 19 519 234 HOH HOH . DA 6 HOH A 20 520 248 HOH HOH . EA 6 HOH B 1 501 1 HOH HOH . EA 6 HOH B 2 502 2 HOH HOH . EA 6 HOH B 3 503 12 HOH HOH . EA 6 HOH B 4 504 19 HOH HOH . EA 6 HOH B 5 505 34 HOH HOH . EA 6 HOH B 6 506 38 HOH HOH . EA 6 HOH B 7 507 46 HOH HOH . EA 6 HOH B 8 508 49 HOH HOH . EA 6 HOH B 9 509 57 HOH HOH . EA 6 HOH B 10 510 60 HOH HOH . EA 6 HOH B 11 511 62 HOH HOH . EA 6 HOH B 12 512 67 HOH HOH . EA 6 HOH B 13 513 78 HOH HOH . EA 6 HOH B 14 514 88 HOH HOH . EA 6 HOH B 15 515 92 HOH HOH . EA 6 HOH B 16 516 95 HOH HOH . EA 6 HOH B 17 517 97 HOH HOH . EA 6 HOH B 18 518 98 HOH HOH . EA 6 HOH B 19 519 99 HOH HOH . EA 6 HOH B 20 520 100 HOH HOH . EA 6 HOH B 21 521 109 HOH HOH . EA 6 HOH B 22 522 113 HOH HOH . EA 6 HOH B 23 523 114 HOH HOH . EA 6 HOH B 24 524 115 HOH HOH . EA 6 HOH B 25 525 125 HOH HOH . EA 6 HOH B 26 526 130 HOH HOH . EA 6 HOH B 27 527 131 HOH HOH . EA 6 HOH B 28 528 135 HOH HOH . EA 6 HOH B 29 529 136 HOH HOH . EA 6 HOH B 30 530 141 HOH HOH . EA 6 HOH B 31 531 145 HOH HOH . EA 6 HOH B 32 532 178 HOH HOH . EA 6 HOH B 33 533 187 HOH HOH . EA 6 HOH B 34 534 203 HOH HOH . EA 6 HOH B 35 535 209 HOH HOH . EA 6 HOH B 36 536 217 HOH HOH . EA 6 HOH B 37 537 225 HOH HOH . EA 6 HOH B 38 538 238 HOH HOH . EA 6 HOH B 39 539 245 HOH HOH . FA 6 HOH C 1 501 4 HOH HOH . FA 6 HOH C 2 502 15 HOH HOH . FA 6 HOH C 3 503 18 HOH HOH . FA 6 HOH C 4 504 21 HOH HOH . FA 6 HOH C 5 505 26 HOH HOH . FA 6 HOH C 6 506 33 HOH HOH . FA 6 HOH C 7 507 58 HOH HOH . FA 6 HOH C 8 508 71 HOH HOH . FA 6 HOH C 9 509 80 HOH HOH . FA 6 HOH C 10 510 87 HOH HOH . FA 6 HOH C 11 511 106 HOH HOH . FA 6 HOH C 12 512 119 HOH HOH . FA 6 HOH C 13 513 121 HOH HOH . FA 6 HOH C 14 514 139 HOH HOH . FA 6 HOH C 15 515 144 HOH HOH . FA 6 HOH C 16 516 148 HOH HOH . FA 6 HOH C 17 517 155 HOH HOH . FA 6 HOH C 18 518 169 HOH HOH . FA 6 HOH C 19 519 197 HOH HOH . FA 6 HOH C 20 520 198 HOH HOH . FA 6 HOH C 21 521 205 HOH HOH . FA 6 HOH C 22 522 206 HOH HOH . FA 6 HOH C 23 523 220 HOH HOH . FA 6 HOH C 24 524 224 HOH HOH . FA 6 HOH C 25 525 228 HOH HOH . FA 6 HOH C 26 526 237 HOH HOH . FA 6 HOH C 27 527 243 HOH HOH . FA 6 HOH C 28 528 247 HOH HOH . GA 6 HOH D 1 501 8 HOH HOH . GA 6 HOH D 2 502 10 HOH HOH . GA 6 HOH D 3 503 31 HOH HOH . GA 6 HOH D 4 504 35 HOH HOH . GA 6 HOH D 5 505 37 HOH HOH . GA 6 HOH D 6 506 39 HOH HOH . GA 6 HOH D 7 507 50 HOH HOH . GA 6 HOH D 8 508 52 HOH HOH . GA 6 HOH D 9 509 61 HOH HOH . GA 6 HOH D 10 510 72 HOH HOH . GA 6 HOH D 11 511 77 HOH HOH . GA 6 HOH D 12 512 83 HOH HOH . GA 6 HOH D 13 513 91 HOH HOH . GA 6 HOH D 14 514 93 HOH HOH . GA 6 HOH D 15 515 94 HOH HOH . GA 6 HOH D 16 516 96 HOH HOH . GA 6 HOH D 17 517 117 HOH HOH . GA 6 HOH D 18 518 122 HOH HOH . GA 6 HOH D 19 519 127 HOH HOH . GA 6 HOH D 20 520 147 HOH HOH . GA 6 HOH D 21 521 150 HOH HOH . GA 6 HOH D 22 522 154 HOH HOH . GA 6 HOH D 23 523 159 HOH HOH . GA 6 HOH D 24 524 160 HOH HOH . GA 6 HOH D 25 525 172 HOH HOH . GA 6 HOH D 26 526 175 HOH HOH . GA 6 HOH D 27 527 188 HOH HOH . GA 6 HOH D 28 528 189 HOH HOH . GA 6 HOH D 29 529 194 HOH HOH . GA 6 HOH D 30 530 196 HOH HOH . GA 6 HOH D 31 531 200 HOH HOH . GA 6 HOH D 32 532 201 HOH HOH . GA 6 HOH D 33 533 211 HOH HOH . GA 6 HOH D 34 534 214 HOH HOH . GA 6 HOH D 35 535 219 HOH HOH . GA 6 HOH D 36 536 221 HOH HOH . GA 6 HOH D 37 537 222 HOH HOH . GA 6 HOH D 38 538 223 HOH HOH . GA 6 HOH D 39 539 233 HOH HOH . GA 6 HOH D 40 540 235 HOH HOH . GA 6 HOH D 41 541 242 HOH HOH . GA 6 HOH D 42 542 246 HOH HOH . HA 6 HOH E 1 501 5 HOH HOH . HA 6 HOH E 2 502 6 HOH HOH . HA 6 HOH E 3 503 13 HOH HOH . HA 6 HOH E 4 504 16 HOH HOH . HA 6 HOH E 5 505 27 HOH HOH . HA 6 HOH E 6 506 28 HOH HOH . HA 6 HOH E 7 507 30 HOH HOH . HA 6 HOH E 8 508 42 HOH HOH . HA 6 HOH E 9 509 47 HOH HOH . HA 6 HOH E 10 510 56 HOH HOH . HA 6 HOH E 11 511 66 HOH HOH . HA 6 HOH E 12 512 84 HOH HOH . HA 6 HOH E 13 513 105 HOH HOH . HA 6 HOH E 14 514 107 HOH HOH . HA 6 HOH E 15 515 116 HOH HOH . HA 6 HOH E 16 516 123 HOH HOH . HA 6 HOH E 17 517 133 HOH HOH . HA 6 HOH E 18 518 152 HOH HOH . HA 6 HOH E 19 519 164 HOH HOH . HA 6 HOH E 20 520 167 HOH HOH . HA 6 HOH E 21 521 170 HOH HOH . HA 6 HOH E 22 522 177 HOH HOH . HA 6 HOH E 23 523 179 HOH HOH . HA 6 HOH E 24 524 181 HOH HOH . HA 6 HOH E 25 525 184 HOH HOH . HA 6 HOH E 26 526 186 HOH HOH . HA 6 HOH E 27 527 193 HOH HOH . HA 6 HOH E 28 528 195 HOH HOH . HA 6 HOH E 29 529 204 HOH HOH . HA 6 HOH E 30 530 213 HOH HOH . HA 6 HOH E 31 531 218 HOH HOH . HA 6 HOH E 32 532 229 HOH HOH . HA 6 HOH E 33 533 240 HOH HOH . IA 6 HOH F 1 501 3 HOH HOH . IA 6 HOH F 2 502 7 HOH HOH . IA 6 HOH F 3 503 14 HOH HOH . IA 6 HOH F 4 504 17 HOH HOH . IA 6 HOH F 5 505 25 HOH HOH . IA 6 HOH F 6 506 36 HOH HOH . IA 6 HOH F 7 507 43 HOH HOH . IA 6 HOH F 8 508 59 HOH HOH . IA 6 HOH F 9 509 65 HOH HOH . IA 6 HOH F 10 510 68 HOH HOH . IA 6 HOH F 11 511 76 HOH HOH . IA 6 HOH F 12 512 79 HOH HOH . IA 6 HOH F 13 513 89 HOH HOH . IA 6 HOH F 14 514 103 HOH HOH . IA 6 HOH F 15 515 108 HOH HOH . IA 6 HOH F 16 516 146 HOH HOH . IA 6 HOH F 17 517 149 HOH HOH . IA 6 HOH F 18 518 153 HOH HOH . IA 6 HOH F 19 519 163 HOH HOH . IA 6 HOH F 20 520 190 HOH HOH . IA 6 HOH F 21 521 191 HOH HOH . IA 6 HOH F 22 522 202 HOH HOH . IA 6 HOH F 23 523 207 HOH HOH . IA 6 HOH F 24 524 227 HOH HOH . IA 6 HOH F 25 525 230 HOH HOH . IA 6 HOH F 26 526 232 HOH HOH . IA 6 HOH F 27 527 236 HOH HOH . JA 6 HOH G 1 501 9 HOH HOH . JA 6 HOH G 2 502 40 HOH HOH . JA 6 HOH G 3 503 53 HOH HOH . JA 6 HOH G 4 504 54 HOH HOH . JA 6 HOH G 5 505 55 HOH HOH . JA 6 HOH G 6 506 63 HOH HOH . JA 6 HOH G 7 507 70 HOH HOH . JA 6 HOH G 8 508 73 HOH HOH . JA 6 HOH G 9 509 75 HOH HOH . JA 6 HOH G 10 510 82 HOH HOH . JA 6 HOH G 11 511 86 HOH HOH . JA 6 HOH G 12 512 90 HOH HOH . JA 6 HOH G 13 513 102 HOH HOH . JA 6 HOH G 14 514 104 HOH HOH . JA 6 HOH G 15 515 110 HOH HOH . JA 6 HOH G 16 516 111 HOH HOH . JA 6 HOH G 17 517 112 HOH HOH . JA 6 HOH G 18 518 118 HOH HOH . JA 6 HOH G 19 519 128 HOH HOH . JA 6 HOH G 20 520 129 HOH HOH . JA 6 HOH G 21 521 134 HOH HOH . JA 6 HOH G 22 522 137 HOH HOH . JA 6 HOH G 23 523 138 HOH HOH . JA 6 HOH G 24 524 140 HOH HOH . JA 6 HOH G 25 525 142 HOH HOH . JA 6 HOH G 26 526 151 HOH HOH . JA 6 HOH G 27 527 156 HOH HOH . JA 6 HOH G 28 528 157 HOH HOH . JA 6 HOH G 29 529 165 HOH HOH . JA 6 HOH G 30 530 166 HOH HOH . JA 6 HOH G 31 531 171 HOH HOH . JA 6 HOH G 32 532 173 HOH HOH . JA 6 HOH G 33 533 182 HOH HOH . JA 6 HOH G 34 534 185 HOH HOH . JA 6 HOH G 35 535 192 HOH HOH . JA 6 HOH G 36 536 199 HOH HOH . JA 6 HOH G 37 537 208 HOH HOH . JA 6 HOH G 38 538 212 HOH HOH . JA 6 HOH G 39 539 215 HOH HOH . JA 6 HOH G 40 540 231 HOH HOH . JA 6 HOH G 41 541 239 HOH HOH . JA 6 HOH G 42 542 244 HOH HOH . KA 6 HOH H 1 501 22 HOH HOH . KA 6 HOH H 2 502 24 HOH HOH . KA 6 HOH H 3 503 29 HOH HOH . KA 6 HOH H 4 504 41 HOH HOH . KA 6 HOH H 5 505 44 HOH HOH . KA 6 HOH H 6 506 45 HOH HOH . KA 6 HOH H 7 507 64 HOH HOH . KA 6 HOH H 8 508 124 HOH HOH . KA 6 HOH H 9 509 158 HOH HOH . KA 6 HOH H 10 510 161 HOH HOH . KA 6 HOH H 11 511 162 HOH HOH . KA 6 HOH H 12 512 168 HOH HOH . KA 6 HOH H 13 513 174 HOH HOH . KA 6 HOH H 14 514 180 HOH HOH . KA 6 HOH H 15 515 210 HOH HOH . KA 6 HOH H 16 516 226 HOH HOH . KA 6 HOH H 17 517 241 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C FMT . . . V 4 10.296 -35.515 -72.008 1 66.99 ? C FMT 404 E 1 HETATM 2 O O1 FMT . . . V 4 10.676 -35.121 -73.109 1 68.66 ? O1 FMT 404 E 1 HETATM 3 O O2 FMT . . . V 4 9.18 -35.985 -71.793 1 67.67 ? O2 FMT 404 E 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 27 _model_server_stats.query_time_ms 360 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 3 #